RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 SSX5O60225 188 aa11.47□□□□□ -0.57
CYSTM1-202ENST00000504227 FOXH1O75593 365 aa11.47□□□□□ -0.57
CYSTM1-202ENST00000504227 FCN3O75636 299 aa11.47□□□□□ -0.57
CYSTM1-202ENST00000504227 NAPSAO96009 420 aa11.47□□□□□ -0.57
CYSTM1-202ENST00000504227 LPLP06858 475 aa11.47□□□□□ -0.57
CYSTM1-202ENST00000504227 DTYMKP23919 212 aa11.47□□□□□ -0.57
CYSTM1-202ENST00000504227 GUCA2AQ02747 115 aa11.47□□□□□ -0.57
CYSTM1-202ENST00000504227 LOXL1Q08397 574 aaPredicted RBP11.47□□□□□ -0.57
CYSTM1-202ENST00000504227 ZNF846Q147U1 533 aa11.47□□□□□ -0.57
CYSTM1-202ENST00000504227 BTN2A1Q7KYR7 527 aa11.47□□□□□ -0.57
CYSTM1-202ENST00000504227 TRAPPC6BQ86SZ2 158 aa11.47□□□□□ -0.57
CYSTM1-202ENST00000504227 GAPTQ8N292 157 aa11.47□□□□□ -0.57
CYSTM1-202ENST00000504227 MFSD4AQ8N468 514 aa11.47□□□□□ -0.57
CYSTM1-202ENST00000504227 TPRX1Q8N7U7 411 aa11.47□□□□□ -0.57
CYSTM1-202ENST00000504227 GDPD1Q8N9F7 314 aa11.47□□□□□ -0.57
CYSTM1-202ENST00000504227 WFDC11Q8NEX6 87 aa11.47□□□□□ -0.57
CYSTM1-202ENST00000504227 OR4K15Q8NH41 348 aa11.47□□□□□ -0.57
CYSTM1-202ENST00000504227 SETD6Q8TBK2 473 aa11.47□□□□□ -0.57
CYSTM1-202ENST00000504227 MRPL30Q8TCC3 161 aaKnown RBP11.47□□□□□ -0.57
CYSTM1-202ENST00000504227 CCDC107Q8WV48 283 aa11.47□□□□□ -0.57
CYSTM1-202ENST00000504227 OCSTAMPQ9BR26 566 aa11.47□□□□□ -0.57
CYSTM1-202ENST00000504227 DCTN5Q9BTE1 182 aa11.47□□□□□ -0.57
CYSTM1-202ENST00000504227 ST6GALNAC5Q9BVH7 336 aa11.47□□□□□ -0.57
CYSTM1-202ENST00000504227 WDR12Q9GZL7 423 aaKnown RBP11.47□□□□□ -0.57
CYSTM1-202ENST00000504227 OR6C3Q9NZP0 311 aa11.47□□□□□ -0.57
CYSTM1-202ENST00000504227 MGAT4AQ9UM21 535 aa11.47□□□□□ -0.57
CYSTM1-202ENST00000504227 MYO9AB2RTY4 2548 aa11.47□□□□□ -0.57
CYSTM1-202ENST00000504227 KIAA2026Q5HYC2 2103 aa11.47□□□□□ -0.57
CYSTM1-202ENST00000504227 TRGV10A0A0A0MS01 117 aa11.46□□□□□ -0.57
CYSTM1-202ENST00000504227 TRBV6-6A0A0A6YYG2 114 aa11.46□□□□□ -0.57
CYSTM1-202ENST00000504227 A0A1W2PQ09 198 aa11.46□□□□□ -0.57
CYSTM1-202ENST00000504227 MEIOCA2RUB1 952 aa11.46□□□□□ -0.57
CYSTM1-202ENST00000504227 GSTZ1O43708 216 aaPredicted RBP11.46□□□□□ -0.57
CYSTM1-202ENST00000504227 RBBP9O75884 186 aa11.46□□□□□ -0.57
CYSTM1-202ENST00000504227 GZMHP20718 246 aa11.46□□□□□ -0.57
CYSTM1-202ENST00000504227 RNASE12Q5GAN4 147 aaKnown RBP11.46□□□□□ -0.57
CYSTM1-202ENST00000504227 MOB1BQ7L9L4 216 aa11.46□□□□□ -0.57
CYSTM1-202ENST00000504227 FAM185AQ8N0U4 392 aa11.46□□□□□ -0.57
CYSTM1-202ENST00000504227 Q8N402 240 aa11.46□□□□□ -0.57
CYSTM1-202ENST00000504227 ZNF565Q8N9K5 539 aa11.46□□□□□ -0.57
CYSTM1-202ENST00000504227 OR52I2Q8NH67 350 aa11.46□□□□□ -0.57
CYSTM1-202ENST00000504227 GPX8Q8TED1 209 aa11.46□□□□□ -0.57
CYSTM1-202ENST00000504227 GCDHQ92947 438 aaPredicted RBP11.46□□□□□ -0.57
CYSTM1-202ENST00000504227 IFT46Q9NQC8 304 aa11.46□□□□□ -0.57
CYSTM1-202ENST00000504227 KCNIP1Q9NZI2 227 aa11.46□□□□□ -0.57
CYSTM1-202ENST00000504227 A0A096LNT2 108 aa11.45□□□□□ -0.58
CYSTM1-202ENST00000504227 TRAV39A0A0B4J263 110 aa11.45□□□□□ -0.58
CYSTM1-202ENST00000504227 A0A1W2PPH5 198 aa11.45□□□□□ -0.58
CYSTM1-202ENST00000504227 MEIS3P1A6NDR6 274 aa11.45□□□□□ -0.58
CYSTM1-202ENST00000504227 A8MXK9 166 aa11.45□□□□□ -0.58
CYSTM1-202ENST00000504227 FCGR3AP08637 254 aa11.45□□□□□ -0.58
CYSTM1-202ENST00000504227 ZFP36P26651 326 aaKnown RBP11.45□□□□□ -0.58
CYSTM1-202ENST00000504227 IL2RGP31785 369 aa11.45□□□□□ -0.58
CYSTM1-202ENST00000504227 GLP1RP43220 463 aa11.45□□□□□ -0.58
CYSTM1-202ENST00000504227 PPP5CP53041 499 aa11.45□□□□□ -0.58
CYSTM1-202ENST00000504227 LCN2P80188 198 aa11.45□□□□□ -0.58
CYSTM1-202ENST00000504227 DGCR2P98153 550 aa11.45□□□□□ -0.58
CYSTM1-202ENST00000504227 ZNF79Q15937 498 aa11.45□□□□□ -0.58
CYSTM1-202ENST00000504227 C6orf183Q5T699 404 aa11.45□□□□□ -0.58
CYSTM1-202ENST00000504227 TMEM200BQ69YZ2 307 aa11.45□□□□□ -0.58
CYSTM1-202ENST00000504227 TRAT1Q6PIZ9 186 aa11.45□□□□□ -0.58
CYSTM1-202ENST00000504227 SMIM4Q8WVI0 70 aa11.45□□□□□ -0.58
CYSTM1-202ENST00000504227 CORO2AQ92828 525 aa11.45□□□□□ -0.58
CYSTM1-202ENST00000504227 SRRQ9GZT4 340 aa11.45□□□□□ -0.58
CYSTM1-202ENST00000504227 Q9N2K0 584 aa11.45□□□□□ -0.58
CYSTM1-202ENST00000504227 C19orf12Q9NSK7 152 aa11.45□□□□□ -0.58
CYSTM1-202ENST00000504227 ZNF230Q9UIE0 474 aaPredicted RBP11.45□□□□□ -0.58
CYSTM1-202ENST00000504227 RPUSD1Q9UJJ7 312 aaKnown RBP11.45□□□□□ -0.58
CYSTM1-202ENST00000504227 UBE2J1Q9Y385 318 aaPredicted RBP11.45□□□□□ -0.58
CYSTM1-202ENST00000504227 LINC00312Q9Y6C7 94 aa11.45□□□□□ -0.58
CYSTM1-202ENST00000504227 PPIAL4CA0A0B4J2A2 164 aa11.44□□□□□ -0.58
CYSTM1-202ENST00000504227 KIAA1324LA8MWY0 1029 aaPredicted RBP11.44□□□□□ -0.58
CYSTM1-202ENST00000504227 TRDCB7Z8K6 153 aa11.44□□□□□ -0.58
CYSTM1-202ENST00000504227 FAM157AC9JC47 383 aa11.44□□□□□ -0.58
CYSTM1-202ENST00000504227 INHBBP09529 407 aa11.44□□□□□ -0.58
CYSTM1-202ENST00000504227 PPIAL4GP0DN37 164 aa11.44□□□□□ -0.58
CYSTM1-202ENST00000504227 RCC1P18754 421 aaPredicted RBP11.44□□□□□ -0.58
CYSTM1-202ENST00000504227 CD40LGP29965 261 aa11.44□□□□□ -0.58
CYSTM1-202ENST00000504227 SSBP1Q04837 148 aaKnown RBP11.44□□□□□ -0.58
CYSTM1-202ENST00000504227 SRSF7Q16629 238 aaKnown RBP eCLIP11.44□□□□□ -0.58
CYSTM1-202ENST00000504227 ZNF880Q6PDB4 577 aa11.44□□□□□ -0.58
CYSTM1-202ENST00000504227 HOGA1Q86XE5 327 aa11.44□□□□□ -0.58
CYSTM1-202ENST00000504227 OR13A1Q8NGR1 328 aa11.44□□□□□ -0.58
CYSTM1-202ENST00000504227 C8orf46Q8TAG6 207 aa11.44□□□□□ -0.58
CYSTM1-202ENST00000504227 MRGPRDQ8TDS7 321 aa11.44□□□□□ -0.58
CYSTM1-202ENST00000504227 C1orf159Q96HA4 380 aa11.44□□□□□ -0.58
CYSTM1-202ENST00000504227 THAP7Q9BT49 309 aaPredicted RBP11.44□□□□□ -0.58
CYSTM1-202ENST00000504227 ZNF286AQ9HBT8 521 aa11.44□□□□□ -0.58
CYSTM1-202ENST00000504227 RAB9BQ9NP90 201 aa11.44□□□□□ -0.58
CYSTM1-202ENST00000504227 MBNL3Q9NUK0 354 aaKnown RBP11.44□□□□□ -0.58
CYSTM1-202ENST00000504227 MTFP1Q9UDX5 166 aa11.44□□□□□ -0.58
CYSTM1-202ENST00000504227 POLR3KQ9Y2Y1 108 aaPredicted RBP11.44□□□□□ -0.58
CYSTM1-202ENST00000504227 WNK2Q9Y3S1 2297 aa11.44□□□□□ -0.58
CYSTM1-202ENST00000504227 ITPR3Q14573 2671 aa11.43□□□□□ -0.58
CYSTM1-202ENST00000504227 KIR2DS1A0A191URI9 304 aa11.43□□□□□ -0.58
CYSTM1-202ENST00000504227 MEX3AA1L020 520 aaKnown RBP11.43□□□□□ -0.58
CYSTM1-202ENST00000504227 B4DSR2 109 aa11.43□□□□□ -0.58
CYSTM1-202ENST00000504227 C22orf46C9J442 243 aa11.43□□□□□ -0.58
CYSTM1-202ENST00000504227 SPINT2O43291 252 aa11.43□□□□□ -0.58
CYSTM1-202ENST00000504227 ENSAO43768 121 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms