RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 SPATA2Q9UM82 520 aa8.27□□□□□ -1.09
NUP54-203ENST00000504173 INSIG2Q9Y5U4 225 aa8.27□□□□□ -1.09
NUP54-203ENST00000504173 KIR2DS1A0A191URI9 304 aa8.26□□□□□ -1.09
NUP54-203ENST00000504173 A0A1W2PPH5 198 aa8.26□□□□□ -1.09
NUP54-203ENST00000504173 hADV38S2A0JD32 116 aa8.26□□□□□ -1.09
NUP54-203ENST00000504173 TMEM30CPA0ZSE6 113 aa8.26□□□□□ -1.09
NUP54-203ENST00000504173 ODAMA1E959 279 aa8.26□□□□□ -1.09
NUP54-203ENST00000504173 UBE2QL1A1L167 161 aa8.26□□□□□ -1.09
NUP54-203ENST00000504173 J3QLI3 93 aa8.26□□□□□ -1.09
NUP54-203ENST00000504173 ZNF701M0R085 212 aaPredicted RBP8.26□□□□□ -1.09
NUP54-203ENST00000504173 SCGNO76038 276 aa8.26□□□□□ -1.09
NUP54-203ENST00000504173 GLAP06280 429 aa8.26□□□□□ -1.09
NUP54-203ENST00000504173 GLIPR1P48060 266 aa8.26□□□□□ -1.09
NUP54-203ENST00000504173 UBE2NLQ5JXB2 153 aa8.26□□□□□ -1.09
NUP54-203ENST00000504173 RSBN1Q5VWQ0 802 aaPredicted RBP8.26□□□□□ -1.09
NUP54-203ENST00000504173 FAHD2BQ6P2I3 314 aaPredicted RBP8.26□□□□□ -1.09
NUP54-203ENST00000504173 MZT2AQ6P582 158 aa8.26□□□□□ -1.09
NUP54-203ENST00000504173 Q6ZTK2 550 aa8.26□□□□□ -1.09
NUP54-203ENST00000504173 C6orf201Q7Z4U5 140 aa8.26□□□□□ -1.09
NUP54-203ENST00000504173 TRAPPC6BQ86SZ2 158 aa8.26□□□□□ -1.09
NUP54-203ENST00000504173 CMTM4Q8IZR5 234 aa8.26□□□□□ -1.09
NUP54-203ENST00000504173 LY6G5BQ8NDX9 201 aa8.26□□□□□ -1.09
NUP54-203ENST00000504173 OR10R2Q8NGX6 335 aa8.26□□□□□ -1.09
NUP54-203ENST00000504173 C8orf46Q8TAG6 207 aa8.26□□□□□ -1.09
NUP54-203ENST00000504173 PLPPR1Q8TBJ4 325 aa8.26□□□□□ -1.09
NUP54-203ENST00000504173 DYNC2LI1Q8TCX1 351 aa8.26□□□□□ -1.09
NUP54-203ENST00000504173 DYRK2Q92630 601 aa8.26□□□□□ -1.09
NUP54-203ENST00000504173 DACT3Q96B18 629 aaPredicted RBP8.26□□□□□ -1.09
NUP54-203ENST00000504173 PHF21AQ96BD5 680 aa8.26□□□□□ -1.09
NUP54-203ENST00000504173 FAHD2AQ96GK7 314 aa8.26□□□□□ -1.09
NUP54-203ENST00000504173 ARHGAP5-AS1Q96IT6 56 aa8.26□□□□□ -1.09
NUP54-203ENST00000504173 SULT4A1Q9BR01 284 aa8.26□□□□□ -1.09
NUP54-203ENST00000504173 C7orf69Q9H7B7 122 aa8.26□□□□□ -1.09
NUP54-203ENST00000504173 CCDC59Q9P031 241 aaKnown RBP8.26□□□□□ -1.09
NUP54-203ENST00000504173 COMMD3Q9UBI1 195 aa8.26□□□□□ -1.09
NUP54-203ENST00000504173 WNK2Q9Y3S1 2297 aa8.26□□□□□ -1.09
NUP54-203ENST00000504173 MEIKINA0A087WXM9 373 aa8.25□□□□□ -1.09
NUP54-203ENST00000504173 TRGV10A0A0A0MS01 117 aa8.25□□□□□ -1.09
NUP54-203ENST00000504173 MEX3AA1L020 520 aaKnown RBP8.25□□□□□ -1.09
NUP54-203ENST00000504173 FOXI3A8MTJ6 420 aaPredicted RBP8.25□□□□□ -1.09
NUP54-203ENST00000504173 RAB27BO00194 218 aa8.25□□□□□ -1.09
NUP54-203ENST00000504173 SRD5A1P18405 259 aa8.25□□□□□ -1.09
NUP54-203ENST00000504173 COMPP49747 757 aaPredicted RBP8.25□□□□□ -1.09
NUP54-203ENST00000504173 TMEM50BP56557 158 aa8.25□□□□□ -1.09
NUP54-203ENST00000504173 ARF6P62330 175 aa8.25□□□□□ -1.09
NUP54-203ENST00000504173 PAX5Q02548 391 aa8.25□□□□□ -1.09
NUP54-203ENST00000504173 MEF2CQ06413 473 aaPredicted RBP8.25□□□□□ -1.09
NUP54-203ENST00000504173 PAX8Q06710 450 aa8.25□□□□□ -1.09
NUP54-203ENST00000504173 DYNC1I2Q13409 638 aaKnown RBP8.25□□□□□ -1.09
NUP54-203ENST00000504173 ZNF273Q14593 569 aa8.25□□□□□ -1.09
NUP54-203ENST00000504173 CR1LQ2VPA4 569 aa8.25□□□□□ -1.09
NUP54-203ENST00000504173 MOGAT2Q3SYC2 334 aa8.25□□□□□ -1.09
NUP54-203ENST00000504173 METTL11BQ5VVY1 283 aa8.25□□□□□ -1.09
NUP54-203ENST00000504173 TMEM200BQ69YZ2 307 aa8.25□□□□□ -1.09
NUP54-203ENST00000504173 SLC35E4Q6ICL7 350 aa8.25□□□□□ -1.09
NUP54-203ENST00000504173 TCF23Q7RTU1 214 aa8.25□□□□□ -1.09
NUP54-203ENST00000504173 KIR3DL3Q8N743 410 aa8.25□□□□□ -1.09
NUP54-203ENST00000504173 SAMD12Q8N8I0 201 aa8.25□□□□□ -1.09
NUP54-203ENST00000504173 SLC25A38Q96DW6 304 aa8.25□□□□□ -1.09
NUP54-203ENST00000504173 RAB3CQ96E17 227 aa8.25□□□□□ -1.09
NUP54-203ENST00000504173 DMRTB1Q96MA1 342 aa8.25□□□□□ -1.09
NUP54-203ENST00000504173 DCUN1D5Q9BTE7 237 aa8.25□□□□□ -1.09
NUP54-203ENST00000504173 FAAP24Q9BTP7 215 aa8.25□□□□□ -1.09
NUP54-203ENST00000504173 PECRQ9BY49 303 aa8.25□□□□□ -1.09
NUP54-203ENST00000504173 OR6C3Q9NZP0 311 aa8.25□□□□□ -1.09
NUP54-203ENST00000504173 KIF25Q9UIL4 384 aa8.25□□□□□ -1.09
NUP54-203ENST00000504173 HSF4Q9ULV5 492 aa8.25□□□□□ -1.09
NUP54-203ENST00000504173 KPTNQ9Y664 436 aa8.25□□□□□ -1.09
NUP54-203ENST00000504173 AUP1Q9Y679 476 aa8.25□□□□□ -1.09
NUP54-203ENST00000504173 LINC00312Q9Y6C7 94 aa8.25□□□□□ -1.09
NUP54-203ENST00000504173 A0A075B6Q4 140 aa8.24□□□□□ -1.09
NUP54-203ENST00000504173 CA11O75493 328 aa8.24□□□□□ -1.09
NUP54-203ENST00000504173 ZNF728P0DKX0 622 aa8.24□□□□□ -1.09
NUP54-203ENST00000504173 HIST1H1DP16402 221 aaKnown RBP8.24□□□□□ -1.09
NUP54-203ENST00000504173 GNB3P16520 340 aa8.24□□□□□ -1.09
NUP54-203ENST00000504173 CCL3L1P16619 93 aa8.24□□□□□ -1.09
NUP54-203ENST00000504173 GLP1RP43220 463 aa8.24□□□□□ -1.09
NUP54-203ENST00000504173 MRPS15P82914 257 aaKnown RBP8.24□□□□□ -1.09
NUP54-203ENST00000504173 PLAC9Q5JTB6 97 aa8.24□□□□□ -1.09
NUP54-203ENST00000504173 ZNF497Q6ZNH5 498 aa8.24□□□□□ -1.09
NUP54-203ENST00000504173 RTN4RL2Q86UN3 420 aa8.24□□□□□ -1.09
NUP54-203ENST00000504173 DGCR14Q96DF8 476 aaKnown RBP8.24□□□□□ -1.09
NUP54-203ENST00000504173 CYYR1Q96J86 154 aa8.24□□□□□ -1.09
NUP54-203ENST00000504173 ZNF714Q96N38 554 aa8.24□□□□□ -1.09
NUP54-203ENST00000504173 PCGF1Q9BSM1 259 aa8.24□□□□□ -1.09
NUP54-203ENST00000504173 TMPRSS13Q9BYE2 586 aa8.24□□□□□ -1.09
NUP54-203ENST00000504173 NCOR1P1Q9H4R4 102 aa8.24□□□□□ -1.09
NUP54-203ENST00000504173 CHMP1AQ9HD42 196 aaPredicted RBP8.24□□□□□ -1.09
NUP54-203ENST00000504173 DIABLOQ9NR28 239 aa8.24□□□□□ -1.09
NUP54-203ENST00000504173 UBE2J1Q9Y385 318 aaPredicted RBP8.24□□□□□ -1.09
NUP54-203ENST00000504173 A0A0A6YYH2 397 aa8.23□□□□□ -1.09
NUP54-203ENST00000504173 TRAV39A0A0B4J263 110 aa8.23□□□□□ -1.09
NUP54-203ENST00000504173 hCG_1809904A0A1W2PP81 198 aa8.23□□□□□ -1.09
NUP54-203ENST00000504173 A0A1W2PPE2 198 aa8.23□□□□□ -1.09
NUP54-203ENST00000504173 A0A1W2PR64 198 aa8.23□□□□□ -1.09
NUP54-203ENST00000504173 A0A1W2PRV1 198 aa8.23□□□□□ -1.09
NUP54-203ENST00000504173 A6NJ64 397 aa8.23□□□□□ -1.09
NUP54-203ENST00000504173 FAM25AB3EWG3 89 aa8.23□□□□□ -1.09
NUP54-203ENST00000504173 FAM25CB3EWG5 89 aa8.23□□□□□ -1.09
NUP54-203ENST00000504173 FAM25GB3EWG6 89 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms