RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 FAM87AP0C7U9 286 aa18.04■□□□□ 0.48
UBE2D3-216ENST00000503742 RCC1P18754 421 aaPredicted RBP18.04■□□□□ 0.48
UBE2D3-216ENST00000503742 UCNP55089 124 aa18.04■□□□□ 0.48
UBE2D3-216ENST00000503742 HLA-DRB3P79483 266 aa18.04■□□□□ 0.48
UBE2D3-216ENST00000503742 PRR30Q53SZ7 412 aaPredicted RBP18.04■□□□□ 0.48
UBE2D3-216ENST00000503742 TOR2AQ5JU69 321 aa18.04■□□□□ 0.48
UBE2D3-216ENST00000503742 PRAMEF6Q5VXH4 476 aa18.04■□□□□ 0.48
UBE2D3-216ENST00000503742 ALKBH2Q6NS38 261 aa18.04■□□□□ 0.48
UBE2D3-216ENST00000503742 WDR82Q6UXN9 313 aa18.04■□□□□ 0.48
UBE2D3-216ENST00000503742 ZNF497Q6ZNH5 498 aa18.04■□□□□ 0.48
UBE2D3-216ENST00000503742 ACOT7LQ6ZUV0 252 aa18.04■□□□□ 0.48
UBE2D3-216ENST00000503742 C22orf34Q6ZV56 151 aa18.04■□□□□ 0.48
UBE2D3-216ENST00000503742 OR4A4PQ8NGN8 299 aa18.04■□□□□ 0.48
UBE2D3-216ENST00000503742 SYT3Q9BQG1 590 aa18.04■□□□□ 0.48
UBE2D3-216ENST00000503742 RNF126Q9BV68 326 aa18.04■□□□□ 0.48
UBE2D3-216ENST00000503742 ASF1BQ9NVP2 202 aa18.04■□□□□ 0.48
UBE2D3-216ENST00000503742 SPEF1Q9Y4P9 236 aa18.04■□□□□ 0.48
UBE2D3-216ENST00000503742 RPS10-NUDT3A0A1W2PQS6 291 aa18.03■□□□□ 0.48
UBE2D3-216ENST00000503742 IGHV3-13P01766 116 aa18.03■□□□□ 0.48
UBE2D3-216ENST00000503742 OR5AC1P0C628 307 aa18.03■□□□□ 0.48
UBE2D3-216ENST00000503742 GNRHRP30968 328 aa18.03■□□□□ 0.48
UBE2D3-216ENST00000503742 CCKARP32238 428 aa18.03■□□□□ 0.48
UBE2D3-216ENST00000503742 LRP11Q86VZ4 500 aa18.03■□□□□ 0.48
UBE2D3-216ENST00000503742 LRTM2Q8N967 370 aa18.03■□□□□ 0.48
UBE2D3-216ENST00000503742 OR11L1Q8NGX0 322 aa18.03■□□□□ 0.48
UBE2D3-216ENST00000503742 CABLES2Q9BTV7 478 aa18.03■□□□□ 0.48
UBE2D3-216ENST00000503742 SUCNR1Q9BXA5 334 aa18.03■□□□□ 0.48
UBE2D3-216ENST00000503742 NUP50Q9UKX7 468 aa18.03■□□□□ 0.48
UBE2D3-216ENST00000503742 PCDHB10Q9UN67 800 aa18.03■□□□□ 0.48
UBE2D3-216ENST00000503742 H0YIZ8 118 aa18.02■□□□□ 0.48
UBE2D3-216ENST00000503742 H7C1Q1 480 aa18.02■□□□□ 0.48
UBE2D3-216ENST00000503742 HAND1O96004 215 aa18.02■□□□□ 0.48
UBE2D3-216ENST00000503742 LYL1P12980 280 aa18.02■□□□□ 0.48
UBE2D3-216ENST00000503742 LMO1P25800 156 aa18.02■□□□□ 0.48
UBE2D3-216ENST00000503742 FIP1L1Q6UN15 594 aaKnown RBP18.02■□□□□ 0.48
UBE2D3-216ENST00000503742 MOB1BQ7L9L4 216 aa18.02■□□□□ 0.48
UBE2D3-216ENST00000503742 CCDC71LQ8N9Z2 235 aa18.02■□□□□ 0.48
UBE2D3-216ENST00000503742 VRK1Q99986 396 aaPredicted RBP18.02■□□□□ 0.48
UBE2D3-216ENST00000503742 TMA7Q9Y2S6 64 aaKnown RBP18.02■□□□□ 0.48
UBE2D3-216ENST00000503742 RAXQ9Y2V3 346 aa18.02■□□□□ 0.48
UBE2D3-216ENST00000503742 WNT9BO14905 357 aa18.02■□□□□ 0.47
UBE2D3-216ENST00000503742 MZT1Q08AG7 82 aa18.02■□□□□ 0.47
UBE2D3-216ENST00000503742 ATXN7L3Q14CW9 347 aaPredicted RBP18.02■□□□□ 0.47
UBE2D3-216ENST00000503742 ACP7Q6ZNF0 438 aa18.02■□□□□ 0.47
UBE2D3-216ENST00000503742 SLC51BQ86UW2 128 aa18.02■□□□□ 0.47
UBE2D3-216ENST00000503742 LDLRAD3Q86YD5 345 aa18.02■□□□□ 0.47
UBE2D3-216ENST00000503742 PIEZO2Q9H5I5 2752 aa18.01■□□□□ 0.47
UBE2D3-216ENST00000503742 MAP1BP46821 2468 aaKnown RBP18.01■□□□□ 0.47
UBE2D3-216ENST00000503742 A6NLC8 198 aa18.01■□□□□ 0.47
UBE2D3-216ENST00000503742 B8ZZF3 427 aa18.01■□□□□ 0.47
UBE2D3-216ENST00000503742 B3GALNT1O75752 331 aa18.01■□□□□ 0.47
UBE2D3-216ENST00000503742 PTBP3O95758 552 aaKnown RBP18.01■□□□□ 0.47
UBE2D3-216ENST00000503742 RAB14P61106 215 aa18.01■□□□□ 0.47
UBE2D3-216ENST00000503742 SP6Q3SY56 376 aa18.01■□□□□ 0.47
UBE2D3-216ENST00000503742 FAM185AQ8N0U4 392 aa18.01■□□□□ 0.47
UBE2D3-216ENST00000503742 MSI2Q96DH6 328 aaKnown RBP18.01■□□□□ 0.47
UBE2D3-216ENST00000503742 ELOVL5Q9NYP7 299 aa18.01■□□□□ 0.47
UBE2D3-216ENST00000503742 JKAMPQ9P055 326 aa18.01■□□□□ 0.47
UBE2D3-216ENST00000503742 RP1L1Q8IWN7 2480 aaPredicted RBP18.01■□□□□ 0.47
UBE2D3-216ENST00000503742 CADP27708 2225 aa18.01■□□□□ 0.47
UBE2D3-216ENST00000503742 IGKV1D-13A0A0B4J2D9 117 aa18■□□□□ 0.47
UBE2D3-216ENST00000503742 IGKV1-13P0DP09 117 aa18■□□□□ 0.47
UBE2D3-216ENST00000503742 CD200P41217 278 aa18■□□□□ 0.47
UBE2D3-216ENST00000503742 RND3P61587 244 aa18■□□□□ 0.47
UBE2D3-216ENST00000503742 LIAT1Q6ZQX7 453 aa18■□□□□ 0.47
UBE2D3-216ENST00000503742 RELL2Q8NC24 303 aaPredicted RBP18■□□□□ 0.47
UBE2D3-216ENST00000503742 GLYATL2Q8WU03 294 aa18■□□□□ 0.47
UBE2D3-216ENST00000503742 TMEM171Q8WVE6 324 aa18■□□□□ 0.47
UBE2D3-216ENST00000503742 MRPL24Q96A35 216 aaKnown RBP18■□□□□ 0.47
UBE2D3-216ENST00000503742 UFSP2Q9NUQ7 469 aa18■□□□□ 0.47
UBE2D3-216ENST00000503742 DUSP13Q9UII6 198 aa18■□□□□ 0.47
UBE2D3-216ENST00000503742 WIPI2Q9Y4P8 454 aa18■□□□□ 0.47
UBE2D3-216ENST00000503742 IGLV3-9A0A075B6K5 115 aa18■□□□□ 0.47
UBE2D3-216ENST00000503742 NPIPB11E5RHQ5 1161 aa18■□□□□ 0.47
UBE2D3-216ENST00000503742 MPPED1O15442 326 aa18■□□□□ 0.47
UBE2D3-216ENST00000503742 GGNBP1Q5YKI7 109 aa18■□□□□ 0.47
UBE2D3-216ENST00000503742 PRSS54Q6PEW0 395 aa18■□□□□ 0.47
UBE2D3-216ENST00000503742 PRR7Q8TB68 274 aa18■□□□□ 0.47
UBE2D3-216ENST00000503742 USB1Q9BQ65 265 aaKnown RBP18■□□□□ 0.47
UBE2D3-216ENST00000503742 GSX2Q9BZM3 304 aa18■□□□□ 0.47
UBE2D3-216ENST00000503742 MBNL3Q9NUK0 354 aaKnown RBP18■□□□□ 0.47
UBE2D3-216ENST00000503742 OR14J1Q9UGF5 321 aa18■□□□□ 0.47
UBE2D3-216ENST00000503742 PSPNO60542 156 aa17.99■□□□□ 0.47
UBE2D3-216ENST00000503742 CEBPDP49716 269 aaPredicted RBP17.99■□□□□ 0.47
UBE2D3-216ENST00000503742 H1FOOQ8IZA3 346 aaPredicted RBP17.99■□□□□ 0.47
UBE2D3-216ENST00000503742 OR2Z1Q8NG97 314 aa17.99■□□□□ 0.47
UBE2D3-216ENST00000503742 SECTM1Q8WVN6 248 aa17.99■□□□□ 0.47
UBE2D3-216ENST00000503742 C18orf12Q96KH6 178 aa17.99■□□□□ 0.47
UBE2D3-216ENST00000503742 GLS2Q9UI32 602 aa17.99■□□□□ 0.47
UBE2D3-216ENST00000503742 MEMO1Q9Y316 297 aa17.99■□□□□ 0.47
UBE2D3-216ENST00000503742 CHD3Q12873 2000 aaKnown RBP17.99■□□□□ 0.47
UBE2D3-216ENST00000503742 ZSCAN5BA6NJL1 495 aa17.99■□□□□ 0.47
UBE2D3-216ENST00000503742 ATP6V1G2-DDX39BF2Z307 99 aa17.99■□□□□ 0.47
UBE2D3-216ENST00000503742 BCL2L11O43521 198 aa17.99■□□□□ 0.47
UBE2D3-216ENST00000503742 IFNA21P01568 189 aa17.99■□□□□ 0.47
UBE2D3-216ENST00000503742 KLF3P57682 345 aaPredicted RBP17.99■□□□□ 0.47
UBE2D3-216ENST00000503742 HOXA4Q00056 320 aaPredicted RBP17.99■□□□□ 0.47
UBE2D3-216ENST00000503742 RAB32Q13637 225 aa17.99■□□□□ 0.47
UBE2D3-216ENST00000503742 IAH1Q2TAA2 248 aaPredicted RBP17.99■□□□□ 0.47
UBE2D3-216ENST00000503742 ZNF818PQ6ZRF7 136 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms