RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 OSBPL10Q9BXB5 764 aa9.05□□□□□ -0.96
CDK9-205ENST00000498339 PRRG3Q9BZD7 231 aa9.05□□□□□ -0.96
CDK9-205ENST00000498339 FAM107BQ9H098 131 aa9.05□□□□□ -0.96
CDK9-205ENST00000498339 ADGRL4Q9HBW9 690 aa9.05□□□□□ -0.96
CDK9-205ENST00000498339 SLC25A19Q9HC21 320 aa9.05□□□□□ -0.96
CDK9-205ENST00000498339 CHCHD3Q9NX63 227 aaKnown RBP9.05□□□□□ -0.96
CDK9-205ENST00000498339 ZNF107Q9UII5 783 aaPredicted RBP9.05□□□□□ -0.96
CDK9-205ENST00000498339 IGKV1-9A0A0C4DH69 117 aa9.04□□□□□ -0.96
CDK9-205ENST00000498339 IGKV1-12A0A0C4DH73 117 aa9.04□□□□□ -0.96
CDK9-205ENST00000498339 H0YJX3 145 aa9.04□□□□□ -0.96
CDK9-205ENST00000498339 I3L521 148 aa9.04□□□□□ -0.96
CDK9-205ENST00000498339 KDM4BO94953 1096 aa9.04□□□□□ -0.96
CDK9-205ENST00000498339 IGKV1D-12P01611 117 aa9.04□□□□□ -0.96
CDK9-205ENST00000498339 RAP2AP10114 183 aa9.04□□□□□ -0.96
CDK9-205ENST00000498339 IL3RAP26951 378 aa9.04□□□□□ -0.96
CDK9-205ENST00000498339 EBI3Q14213 229 aa9.04□□□□□ -0.96
CDK9-205ENST00000498339 SPATS1Q496A3 300 aa9.04□□□□□ -0.96
CDK9-205ENST00000498339 Q6P435 159 aa9.04□□□□□ -0.96
CDK9-205ENST00000498339 TMEM179BQ7Z7N9 219 aa9.04□□□□□ -0.96
CDK9-205ENST00000498339 HAPLN4Q86UW8 402 aa9.04□□□□□ -0.96
CDK9-205ENST00000498339 LYPD6Q86Y78 171 aa9.04□□□□□ -0.96
CDK9-205ENST00000498339 HS3ST5Q8IZT8 346 aa9.04□□□□□ -0.96
CDK9-205ENST00000498339 Q8N6K4 173 aa9.04□□□□□ -0.96
CDK9-205ENST00000498339 ZNF491Q8N8L2 437 aa9.04□□□□□ -0.96
CDK9-205ENST00000498339 OR51T1Q8NGJ9 327 aa9.04□□□□□ -0.96
CDK9-205ENST00000498339 DLX4Q92988 240 aaPredicted RBP9.04□□□□□ -0.96
CDK9-205ENST00000498339 SPSB1Q96BD6 273 aa9.04□□□□□ -0.96
CDK9-205ENST00000498339 ADAT3Q96EY9 351 aaPredicted RBP9.04□□□□□ -0.96
CDK9-205ENST00000498339 LRGUKQ96M69 825 aa9.04□□□□□ -0.96
CDK9-205ENST00000498339 NR1H4Q96RI1 486 aaPredicted RBP9.04□□□□□ -0.96
CDK9-205ENST00000498339 RSRP1Q9BUV0 290 aa9.04□□□□□ -0.96
CDK9-205ENST00000498339 ALX4Q9H161 411 aaPredicted RBP9.04□□□□□ -0.96
CDK9-205ENST00000498339 KLK15Q9H2R5 256 aa9.04□□□□□ -0.96
CDK9-205ENST00000498339 OR51J1Q9H342 316 aa9.04□□□□□ -0.96
CDK9-205ENST00000498339 TAGLN3Q9UI15 199 aa9.04□□□□□ -0.96
CDK9-205ENST00000498339 WSB1Q9Y6I7 421 aa9.04□□□□□ -0.96
CDK9-205ENST00000498339 TRAV39A0A0B4J263 110 aa9.03□□□□□ -0.96
CDK9-205ENST00000498339 LINC01619G3V211 115 aa9.03□□□□□ -0.96
CDK9-205ENST00000498339 M0R129 80 aa9.03□□□□□ -0.96
CDK9-205ENST00000498339 PRKYO43930 277 aa9.03□□□□□ -0.96
CDK9-205ENST00000498339 OR8U9P0C7N5 309 aa9.03□□□□□ -0.96
CDK9-205ENST00000498339 ARSBP15848 533 aa9.03□□□□□ -0.96
CDK9-205ENST00000498339 HTR1FP30939 366 aa9.03□□□□□ -0.96
CDK9-205ENST00000498339 RUNX1Q01196 453 aa9.03□□□□□ -0.96
CDK9-205ENST00000498339 FAM220AQ7Z4H9 259 aa9.03□□□□□ -0.96
CDK9-205ENST00000498339 RDH10Q8IZV5 341 aa9.03□□□□□ -0.96
CDK9-205ENST00000498339 IL17DQ8TAD2 202 aa9.03□□□□□ -0.96
CDK9-205ENST00000498339 MYOZ3Q8TDC0 251 aa9.03□□□□□ -0.96
CDK9-205ENST00000498339 FGGYQ96C11 551 aa9.03□□□□□ -0.96
CDK9-205ENST00000498339 OR4C12Q96R67 309 aa9.03□□□□□ -0.96
CDK9-205ENST00000498339 BARHL1Q9BZE3 327 aa9.03□□□□□ -0.96
CDK9-205ENST00000498339 PARP11Q9NR21 331 aa9.03□□□□□ -0.96
CDK9-205ENST00000498339 FAM118AQ9NWS6 357 aa9.03□□□□□ -0.96
CDK9-205ENST00000498339 HERC2O95714 4834 aa9.02□□□□□ -0.97
CDK9-205ENST00000498339 METTL15A6NJ78 407 aa9.02□□□□□ -0.97
CDK9-205ENST00000498339 G3V318 75 aa9.02□□□□□ -0.97
CDK9-205ENST00000498339 SLC25A17O43808 307 aa9.02□□□□□ -0.97
CDK9-205ENST00000498339 APOL3O95236 402 aa9.02□□□□□ -0.97
CDK9-205ENST00000498339 IGF1P05019 195 aa9.02□□□□□ -0.97
CDK9-205ENST00000498339 TMEM225BP0DP42 221 aa9.02□□□□□ -0.97
CDK9-205ENST00000498339 ANXA8P13928 327 aa9.02□□□□□ -0.97
CDK9-205ENST00000498339 PRKACGP22612 351 aa9.02□□□□□ -0.97
CDK9-205ENST00000498339 CD1BP29016 333 aa9.02□□□□□ -0.97
CDK9-205ENST00000498339 ACSM6Q6P461 480 aa9.02□□□□□ -0.97
CDK9-205ENST00000498339 SLC16A12Q6ZSM3 486 aa9.02□□□□□ -0.97
CDK9-205ENST00000498339 PRSS35Q8N3Z0 413 aa9.02□□□□□ -0.97
CDK9-205ENST00000498339 FAM71E2Q8N5Q1 922 aa9.02□□□□□ -0.97
CDK9-205ENST00000498339 OR10H4Q8NGA5 316 aa9.02□□□□□ -0.97
CDK9-205ENST00000498339 OR10A7Q8NGE5 316 aa9.02□□□□□ -0.97
CDK9-205ENST00000498339 OR8H1Q8NGG4 311 aa9.02□□□□□ -0.97
CDK9-205ENST00000498339 OR13C9Q8NGT0 318 aa9.02□□□□□ -0.97
CDK9-205ENST00000498339 RTN4IP1Q8WWV3 396 aaPredicted RBP9.02□□□□□ -0.97
CDK9-205ENST00000498339 UTP4Q969X6 686 aaKnown RBP9.02□□□□□ -0.97
CDK9-205ENST00000498339 RBMXL1Q96E39 390 aaKnown RBP9.02□□□□□ -0.97
CDK9-205ENST00000498339 GNG8Q9UK08 70 aa9.02□□□□□ -0.97
CDK9-205ENST00000498339 TNCP24821 2201 aa9.01□□□□□ -0.97
CDK9-205ENST00000498339 A0A1W2PQL4 384 aaPredicted RBP9.01□□□□□ -0.97
CDK9-205ENST00000498339 ZNF736B4DX44 427 aaPredicted RBP9.01□□□□□ -0.97
CDK9-205ENST00000498339 NPIPB11E5RHQ5 1161 aa9.01□□□□□ -0.97
CDK9-205ENST00000498339 SDCBPO00560 298 aaPredicted RBP9.01□□□□□ -0.97
CDK9-205ENST00000498339 ATP6V0E1O15342 81 aa9.01□□□□□ -0.97
CDK9-205ENST00000498339 CGB3P0DN86 165 aa9.01□□□□□ -0.97
CDK9-205ENST00000498339 CGB7P0DN87 165 aa9.01□□□□□ -0.97
CDK9-205ENST00000498339 RAB9AP51151 201 aa9.01□□□□□ -0.97
CDK9-205ENST00000498339 CRISP1P54107 249 aa9.01□□□□□ -0.97
CDK9-205ENST00000498339 F2RL1P55085 397 aa9.01□□□□□ -0.97
CDK9-205ENST00000498339 CDK5R1Q15078 307 aa9.01□□□□□ -0.97
CDK9-205ENST00000498339 MMDQ15546 238 aa9.01□□□□□ -0.97
CDK9-205ENST00000498339 NXNL2Q5VZ03 156 aa9.01□□□□□ -0.97
CDK9-205ENST00000498339 UTS2BQ765I0 119 aa9.01□□□□□ -0.97
CDK9-205ENST00000498339 ANKRD13BQ86YJ7 626 aa9.01□□□□□ -0.97
CDK9-205ENST00000498339 GID4Q8IVV7 300 aa9.01□□□□□ -0.97
CDK9-205ENST00000498339 TCEANCQ8N8B7 351 aa9.01□□□□□ -0.97
CDK9-205ENST00000498339 OR13C3Q8NGS6 347 aa9.01□□□□□ -0.97
CDK9-205ENST00000498339 UBALD1Q8TB05 177 aa9.01□□□□□ -0.97
CDK9-205ENST00000498339 CCDC124Q96CT7 223 aaKnown RBP9.01□□□□□ -0.97
CDK9-205ENST00000498339 CHCHD6Q9BRQ6 235 aa9.01□□□□□ -0.97
CDK9-205ENST00000498339 TUBA4BQ9H853 241 aa9.01□□□□□ -0.97
CDK9-205ENST00000498339 RHOFQ9HBH0 211 aa9.01□□□□□ -0.97
CDK9-205ENST00000498339 PLSCR3Q9NRY6 295 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms