RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 OR12D1P0DN82 309 aa0.84□□□□□ -2.27
SMC4-227ENST00000497984 MAGEA6P43360 314 aa0.84□□□□□ -2.27
SMC4-227ENST00000497984 RAB38P57729 211 aa0.84□□□□□ -2.27
SMC4-227ENST00000497984 MMDQ15546 238 aa0.84□□□□□ -2.27
SMC4-227ENST00000497984 GOLGA7BQ2TAP0 167 aa0.84□□□□□ -2.27
SMC4-227ENST00000497984 HSP90AA4PQ58FG1 418 aa0.84□□□□□ -2.27
SMC4-227ENST00000497984 SLC25A25Q6KCM7 469 aa0.84□□□□□ -2.27
SMC4-227ENST00000497984 FAHD1Q6P587 224 aa0.84□□□□□ -2.27
SMC4-227ENST00000497984 PID1Q7Z2X4 250 aa0.84□□□□□ -2.27
SMC4-227ENST00000497984 SYS1Q8N2H4 156 aa0.84□□□□□ -2.27
SMC4-227ENST00000497984 C2orf73Q8N5S3 287 aaPredicted RBP0.84□□□□□ -2.27
SMC4-227ENST00000497984 KRTCAP2Q8N6L1 136 aa0.84□□□□□ -2.27
SMC4-227ENST00000497984 ASCC1Q8N9N2 400 aaKnown RBP0.84□□□□□ -2.27
SMC4-227ENST00000497984 FER1L6-AS1Q8NA97 138 aa0.84□□□□□ -2.27
SMC4-227ENST00000497984 GATD1Q8NB37 220 aa0.84□□□□□ -2.27
SMC4-227ENST00000497984 OR10P1Q8NGE3 313 aa0.84□□□□□ -2.27
SMC4-227ENST00000497984 OR13C9Q8NGT0 318 aa0.84□□□□□ -2.27
SMC4-227ENST00000497984 SLC19A3Q9BZV2 496 aa0.84□□□□□ -2.27
SMC4-227ENST00000497984 DIABLOQ9NR28 239 aa0.84□□□□□ -2.27
SMC4-227ENST00000497984 BTRCQ9Y297 605 aa0.84□□□□□ -2.27
SMC4-227ENST00000497984 OR51B4Q9Y5P0 310 aa0.84□□□□□ -2.27
SMC4-227ENST00000497984 MUC5BQ9HC84 5762 aaPredicted RBP0.84□□□□□ -2.28
SMC4-227ENST00000497984 GSTTP1A0A1W2PQM5 241 aa0.83□□□□□ -2.28
SMC4-227ENST00000497984 H3BRN7 92 aa0.83□□□□□ -2.28
SMC4-227ENST00000497984 PDCD6O75340 191 aa0.83□□□□□ -2.28
SMC4-227ENST00000497984 ZNF189O75820 626 aaPredicted RBP0.83□□□□□ -2.28
SMC4-227ENST00000497984 OTCP00480 354 aa0.83□□□□□ -2.28
SMC4-227ENST00000497984 GYPCP04921 128 aa0.83□□□□□ -2.28
SMC4-227ENST00000497984 SLC2A1P11166 492 aa0.83□□□□□ -2.28
SMC4-227ENST00000497984 TTPAP49638 278 aa0.83□□□□□ -2.28
SMC4-227ENST00000497984 RAB25P57735 213 aa0.83□□□□□ -2.28
SMC4-227ENST00000497984 BAXQ07812 192 aa0.83□□□□□ -2.28
SMC4-227ENST00000497984 C2orf80Q0P641 193 aa0.83□□□□□ -2.28
SMC4-227ENST00000497984 APOFQ13790 326 aa0.83□□□□□ -2.28
SMC4-227ENST00000497984 HES1Q14469 280 aa0.83□□□□□ -2.28
SMC4-227ENST00000497984 WDR43Q15061 677 aaKnown RBP eCLIP0.83□□□□□ -2.285e-20■■■■■ 85.2
SMC4-227ENST00000497984 SS18Q15532 418 aa0.83□□□□□ -2.28
SMC4-227ENST00000497984 HNRNPA1L2Q32P51 320 aaKnown RBP0.83□□□□□ -2.28
SMC4-227ENST00000497984 CEACAM21Q3KPI0 293 aa0.83□□□□□ -2.28
SMC4-227ENST00000497984 CLEC20AQ6ZU45 233 aa0.83□□□□□ -2.28
SMC4-227ENST00000497984 FAM19A3Q7Z5A8 133 aa0.83□□□□□ -2.28
SMC4-227ENST00000497984 SPICQ8N5J4 248 aa0.83□□□□□ -2.28
SMC4-227ENST00000497984 OR6K2Q8NGY2 324 aa0.83□□□□□ -2.28
SMC4-227ENST00000497984 OR2AE1Q8NHA4 323 aa0.83□□□□□ -2.28
SMC4-227ENST00000497984 KCTD4Q8WVF5 259 aa0.83□□□□□ -2.28
SMC4-227ENST00000497984 NELFBQ8WX92 580 aa0.83□□□□□ -2.28
SMC4-227ENST00000497984 CDKL2Q92772 493 aa0.83□□□□□ -2.28
SMC4-227ENST00000497984 HIST1H2BAQ96A08 127 aa0.83□□□□□ -2.28
SMC4-227ENST00000497984 SUCNR1Q9BXA5 334 aa0.83□□□□□ -2.28
SMC4-227ENST00000497984 ALX4Q9H161 411 aaPredicted RBP0.83□□□□□ -2.28
SMC4-227ENST00000497984 KCNIP2Q9NS61 270 aa0.83□□□□□ -2.28
SMC4-227ENST00000497984 RMND1Q9NWS8 449 aa0.83□□□□□ -2.28
SMC4-227ENST00000497984 POMPQ9Y244 141 aa0.83□□□□□ -2.28
SMC4-227ENST00000497984 COL4A2P08572 1712 aa0.83□□□□□ -2.28
SMC4-227ENST00000497984 AHNAKQ09666 5890 aaKnown RBP0.83□□□□□ -2.28
SMC4-227ENST00000497984 CRB1P82279 1406 aa0.82□□□□□ -2.28
SMC4-227ENST00000497984 A0A1W2PRG6 482 aa0.82□□□□□ -2.28
SMC4-227ENST00000497984 EEF1E1O43324 174 aaKnown RBP0.82□□□□□ -2.28
SMC4-227ENST00000497984 SLC25A20O43772 301 aa0.82□□□□□ -2.28
SMC4-227ENST00000497984 SPOPO43791 374 aa0.82□□□□□ -2.28
SMC4-227ENST00000497984 ZNF3P17036 446 aa0.82□□□□□ -2.28
SMC4-227ENST00000497984 BGNP21810 368 aa0.82□□□□□ -2.28
SMC4-227ENST00000497984 TSPOP30536 169 aa0.82□□□□□ -2.28
SMC4-227ENST00000497984 DEKP35659 375 aaKnown RBP0.82□□□□□ -2.28
SMC4-227ENST00000497984 GABRA4P48169 554 aa0.82□□□□□ -2.28
SMC4-227ENST00000497984 HBG1P69891 147 aa0.82□□□□□ -2.28
SMC4-227ENST00000497984 HBG2P69892 147 aa0.82□□□□□ -2.28
SMC4-227ENST00000497984 SSX7Q7RTT5 188 aa0.82□□□□□ -2.28
SMC4-227ENST00000497984 C10orf107Q8IVU9 208 aa0.82□□□□□ -2.28
SMC4-227ENST00000497984 FAM58AQ8N1B3 248 aa0.82□□□□□ -2.28
SMC4-227ENST00000497984 MUC15Q8N387 334 aa0.82□□□□□ -2.28
SMC4-227ENST00000497984 SLC25A45Q8N413 288 aa0.82□□□□□ -2.28
SMC4-227ENST00000497984 OR8G5Q8NG78 346 aa0.82□□□□□ -2.28
SMC4-227ENST00000497984 LGALS14Q8TCE9 139 aa0.82□□□□□ -2.28
SMC4-227ENST00000497984 ZMYND19Q96E35 227 aaPredicted RBP0.82□□□□□ -2.28
SMC4-227ENST00000497984 CIB1Q99828 191 aa0.82□□□□□ -2.28
SMC4-227ENST00000497984 COPS4Q9BT78 406 aa0.82□□□□□ -2.28
SMC4-227ENST00000497984 VCX3AQ9NNX9 186 aa0.82□□□□□ -2.28
SMC4-227ENST00000497984 TBL2Q9Y4P3 447 aaKnown RBP0.82□□□□□ -2.28
SMC4-227ENST00000497984 SLIT2O94813 1529 aa0.82□□□□□ -2.28
SMC4-227ENST00000497984 SHANK3Q9BYB0 1731 aa0.81□□□□□ -2.28
SMC4-227ENST00000497984 IGKV1-12A0A0C4DH73 117 aa0.81□□□□□ -2.28
SMC4-227ENST00000497984 LOC102725191A0A1B0GVB3 256 aa0.81□□□□□ -2.28
SMC4-227ENST00000497984 TMEM250H0YL14 139 aa0.81□□□□□ -2.28
SMC4-227ENST00000497984 J3QLI3 93 aa0.81□□□□□ -2.28
SMC4-227ENST00000497984 SHOX2O60902 331 aaPredicted RBP0.81□□□□□ -2.28
SMC4-227ENST00000497984 ZMPSTE24O75844 475 aa0.81□□□□□ -2.28
SMC4-227ENST00000497984 CSTAP01040 98 aa0.81□□□□□ -2.28
SMC4-227ENST00000497984 IGKV1D-12P01611 117 aa0.81□□□□□ -2.28
SMC4-227ENST00000497984 PTNP21246 168 aa0.81□□□□□ -2.28
SMC4-227ENST00000497984 CRABP1P29762 137 aa0.81□□□□□ -2.28
SMC4-227ENST00000497984 DSTNP60981 165 aa0.81□□□□□ -2.28
SMC4-227ENST00000497984 RHOAP61586 193 aa0.81□□□□□ -2.28
SMC4-227ENST00000497984 XIAPP98170 497 aa0.81□□□□□ -2.28
SMC4-227ENST00000497984 PRDX1Q06830 199 aaKnown RBP0.81□□□□□ -2.28
SMC4-227ENST00000497984 STK38Q15208 465 aa0.81□□□□□ -2.28
SMC4-227ENST00000497984 OR8G1Q15617 311 aa0.81□□□□□ -2.28
SMC4-227ENST00000497984 HES3Q5TGS1 186 aa0.81□□□□□ -2.28
SMC4-227ENST00000497984 Q6ZT83 130 aa0.81□□□□□ -2.28
SMC4-227ENST00000497984 TCAIMQ8N3R3 496 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms