RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, human

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3C-208	ENST00000497368		A0A1W2PP11	408 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	WI2-2373I1.2	A0A1W2PRP0	233 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	ODAM	A1E959	279 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	BTBD17	A6NE02	478 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	FAM90A18P	A6NE21	464 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	FAM90A16P	A6NEW6	464 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	FAM90A20P	A6NIJ5	464 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	FAM90A9P	A6NNJ1	464 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	FAM90A12P	A8MX19	464 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	FAM90A5P	A8MXJ8	464 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	MGST3	O14880	152 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	GATB	O75879	557 aa	Known RBP	4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	ZFPL1	O95159	310 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	CSN2	P05814	226 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	FAM90A15P	P0C7V4	464 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	FAM90A13P	P0C7W8	464 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	FAM90A14P	P0C7W9	464 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	FAM90A24P	P0C7X0	464 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	LIMS3	P0CW19	117 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	LIMS4	P0CW20	117 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	DBT	P11182	482 aa	Known RBP	4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	IGLL1	P15814	213 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	GCSH	P23434	173 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	FAS	P25445	335 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	GTF2A1	P52655	376 aa	Predicted RBP	4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	ACTR3	P61158	418 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	SNRPG	P62308	76 aa	Known RBP	4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	AES	Q08117	197 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	TMED1	Q13445	227 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	BLMH	Q13867	455 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	KPNB1	Q14974	876 aa	Known RBP	4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	ATXN7L3	Q14CW9	347 aa	Predicted RBP	4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	HLA-DRB5	Q30154	266 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	ZIK1	Q3SY52	487 aa	Predicted RBP	4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	SPIN3	Q5JUX0	258 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	TPTE2P1	Q5T6R2	138 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	MINOS1	Q5TGZ0	78 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	RSBN1	Q5VWQ0	802 aa	Predicted RBP	4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	LPCAT4	Q643R3	524 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	LAIR2	Q6ISS4	152 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	C11orf88	Q6PI97	169 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	HEPN1	Q6WQI6	88 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368		Q6ZTK2	550 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	C5orf24	Q7Z6I8	188 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	RTN4RL2	Q86UN3	420 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	NDUFA11	Q86Y39	141 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	LYPD6	Q86Y78	171 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	FAM58A	Q8N1B3	248 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	ZNF676	Q8N7Q3	588 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	ZNF485	Q8NCK3	441 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	WFDC9	Q8NEX5	89 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368		Q8NFD4	153 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	OR52I1	Q8NGK6	324 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	OR13C5	Q8NGS8	318 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	PP6455	Q8WZ26	134 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	LEAP2	Q969E1	77 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	FGGY	Q96C11	551 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	C10orf35	Q96D05	121 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	MALSU1	Q96EH3	234 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	BORCS8	Q96FH0	119 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	CENPN	Q96H22	339 aa	Predicted RBP	4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	C4orf36	Q96KX1	117 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	CLEC7A	Q9BXN2	247 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	LINC00574	Q9H8X3	128 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	PLEKHA1	Q9HB21	404 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	INPP5E	Q9NRR6	644 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	MINOS1-NBL1	R4GNA1	71 aa		4.35	□□□□□ -1.71
UBE3C-208	ENST00000497368	TRAV39	A0A0B4J263	110 aa		4.34	□□□□□ -1.71
UBE3C-208	ENST00000497368	LINC01548	A6NM66	108 aa		4.34	□□□□□ -1.71
UBE3C-208	ENST00000497368	NPIPB11	E5RHQ5	1161 aa		4.34	□□□□□ -1.71
UBE3C-208	ENST00000497368	C15orf65	H3BRN8	121 aa		4.34	□□□□□ -1.71
UBE3C-208	ENST00000497368	F2RL2	O00254	374 aa		4.34	□□□□□ -1.71
UBE3C-208	ENST00000497368	OR2F2	O95006	317 aa		4.34	□□□□□ -1.71
UBE3C-208	ENST00000497368	GABRR1	P24046	479 aa		4.34	□□□□□ -1.71
UBE3C-208	ENST00000497368	CDK2	P24941	298 aa		4.34	□□□□□ -1.71
UBE3C-208	ENST00000497368	SSTR5	P35346	364 aa		4.34	□□□□□ -1.71
UBE3C-208	ENST00000497368	VDAC2	P45880	294 aa	Predicted RBP	4.34	□□□□□ -1.71
UBE3C-208	ENST00000497368	OR3A4P	P47883	348 aa		4.34	□□□□□ -1.71
UBE3C-208	ENST00000497368	RBP2	P50120	134 aa		4.34	□□□□□ -1.71
UBE3C-208	ENST00000497368	CCR9	P51686	369 aa		4.34	□□□□□ -1.71
UBE3C-208	ENST00000497368	RPS11	P62280	158 aa	Known RBP eCLIP	4.34	□□□□□ -1.71
UBE3C-208	ENST00000497368	BDH1	Q02338	343 aa		4.34	□□□□□ -1.71
UBE3C-208	ENST00000497368	PAX5	Q02548	391 aa		4.34	□□□□□ -1.71
UBE3C-208	ENST00000497368	FOXI1	Q12951	378 aa		4.34	□□□□□ -1.71
UBE3C-208	ENST00000497368	ALKBH1	Q13686	389 aa	Known RBP	4.34	□□□□□ -1.71
UBE3C-208	ENST00000497368	ZSCAN26	Q16670	478 aa		4.34	□□□□□ -1.71
UBE3C-208	ENST00000497368	PIGY	Q3MUY2	71 aa		4.34	□□□□□ -1.71
UBE3C-208	ENST00000497368	C1orf146	Q5VVC0	180 aa		4.34	□□□□□ -1.71
UBE3C-208	ENST00000497368	ASCL4	Q6XD76	172 aa		4.34	□□□□□ -1.71
UBE3C-208	ENST00000497368	GDPD3	Q7L5L3	318 aa		4.34	□□□□□ -1.71
UBE3C-208	ENST00000497368	CBR4	Q8N4T8	237 aa		4.34	□□□□□ -1.71
UBE3C-208	ENST00000497368	PARP16	Q8N5Y8	322 aa		4.34	□□□□□ -1.71
UBE3C-208	ENST00000497368		Q8N6K4	173 aa		4.34	□□□□□ -1.71
UBE3C-208	ENST00000497368	OR51T1	Q8NGJ9	327 aa		4.34	□□□□□ -1.71
UBE3C-208	ENST00000497368	OR13D1	Q8NGV5	346 aa		4.34	□□□□□ -1.71
UBE3C-208	ENST00000497368	OR10K1	Q8NGX5	313 aa		4.34	□□□□□ -1.71
UBE3C-208	ENST00000497368	MYDGF	Q969H8	173 aa		4.34	□□□□□ -1.71
UBE3C-208	ENST00000497368	SPSB1	Q96BD6	273 aa		4.34	□□□□□ -1.71
UBE3C-208	ENST00000497368	RBM14	Q96PK6	669 aa	Known RBP	4.34	□□□□□ -1.71
UBE3C-208	ENST00000497368	PDCD1LG2	Q9BQ51	273 aa		4.34	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 57 ms