RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 GZMHP20718 246 aa13.34□□□□□ -0.27
TRAPPC3-207ENST00000497251 NFYBP25208 207 aa13.34□□□□□ -0.27
TRAPPC3-207ENST00000497251 GDNFP39905 211 aa13.34□□□□□ -0.27
TRAPPC3-207ENST00000497251 NANOS3P60323 173 aaKnown RBP13.34□□□□□ -0.27
TRAPPC3-207ENST00000497251 ALKBH1Q13686 389 aaKnown RBP13.34□□□□□ -0.27
TRAPPC3-207ENST00000497251 RBM39Q14498 530 aaKnown RBP13.34□□□□□ -0.27
TRAPPC3-207ENST00000497251 IL13RA2Q14627 380 aa13.34□□□□□ -0.27
TRAPPC3-207ENST00000497251 CDK5R1Q15078 307 aa13.34□□□□□ -0.27
TRAPPC3-207ENST00000497251 KISS1Q15726 138 aa13.34□□□□□ -0.27
TRAPPC3-207ENST00000497251 LRRC36Q1X8D7 754 aa13.34□□□□□ -0.27
TRAPPC3-207ENST00000497251 LHFPL3Q86UP9 236 aa13.34□□□□□ -0.27
TRAPPC3-207ENST00000497251 PARP16Q8N5Y8 322 aa13.34□□□□□ -0.27
TRAPPC3-207ENST00000497251 C5orf56Q8N8D9 126 aa13.34□□□□□ -0.27
TRAPPC3-207ENST00000497251 SETD9Q8NE22 299 aa13.34□□□□□ -0.27
TRAPPC3-207ENST00000497251 Q8NFD4 153 aa13.34□□□□□ -0.27
TRAPPC3-207ENST00000497251 OR52I1Q8NGK6 324 aa13.34□□□□□ -0.27
TRAPPC3-207ENST00000497251 OR13C9Q8NGT0 318 aa13.34□□□□□ -0.27
TRAPPC3-207ENST00000497251 ZNF649Q9BS31 505 aa13.34□□□□□ -0.27
TRAPPC3-207ENST00000497251 FGF20Q9NP95 211 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC3-207ENST00000497251 CALYQ9NYX4 217 aa13.34□□□□□ -0.27
TRAPPC3-207ENST00000497251 MEIKINA0A087WXM9 373 aa13.33□□□□□ -0.28
TRAPPC3-207ENST00000497251 IRGMA1A4Y4 181 aa13.33□□□□□ -0.28
TRAPPC3-207ENST00000497251 TMEM212A6NML5 194 aa13.33□□□□□ -0.28
TRAPPC3-207ENST00000497251 CASQ2O14958 399 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC3-207ENST00000497251 MAGEB3O15480 346 aa13.33□□□□□ -0.28
TRAPPC3-207ENST00000497251 SNRNP70P08621 437 aaKnown RBP13.33□□□□□ -0.28
TRAPPC3-207ENST00000497251 ZP1P60852 638 aa13.33□□□□□ -0.28
TRAPPC3-207ENST00000497251 EBI3Q14213 229 aa13.33□□□□□ -0.28
TRAPPC3-207ENST00000497251 ETV3LQ6ZN32 361 aa13.33□□□□□ -0.28
TRAPPC3-207ENST00000497251 DHRSXQ8N5I4 330 aa13.33□□□□□ -0.28
TRAPPC3-207ENST00000497251 RFT1Q96AA3 541 aa13.33□□□□□ -0.28
TRAPPC3-207ENST00000497251 P2RX4Q99571 388 aa13.33□□□□□ -0.28
TRAPPC3-207ENST00000497251 IDI2-AS1Q9NZ38 188 aa13.33□□□□□ -0.28
TRAPPC3-207ENST00000497251 KMT2CQ8NEZ4 4911 aaKnown RBP13.33□□□□□ -0.28
TRAPPC3-207ENST00000497251 A0A1W2PPI3 338 aa13.32□□□□□ -0.28
TRAPPC3-207ENST00000497251 FAM172BPA6NC97 362 aa13.32□□□□□ -0.28
TRAPPC3-207ENST00000497251 SERPINE3A8MV23 424 aa13.32□□□□□ -0.28
TRAPPC3-207ENST00000497251 H0YHG0 523 aa13.32□□□□□ -0.28
TRAPPC3-207ENST00000497251 H0YJX3 145 aa13.32□□□□□ -0.28
TRAPPC3-207ENST00000497251 CCRL2O00421 344 aa13.32□□□□□ -0.28
TRAPPC3-207ENST00000497251 HCKP08631 526 aa13.32□□□□□ -0.28
TRAPPC3-207ENST00000497251 CCDC159P0C7I6 412 aa13.32□□□□□ -0.28
TRAPPC3-207ENST00000497251 TMEM11P17152 192 aa13.32□□□□□ -0.28
TRAPPC3-207ENST00000497251 DCKP27707 260 aa13.32□□□□□ -0.28
TRAPPC3-207ENST00000497251 ADARB1P78563 741 aaKnown RBP13.32□□□□□ -0.28
TRAPPC3-207ENST00000497251 DGCR2P98153 550 aa13.32□□□□□ -0.28
TRAPPC3-207ENST00000497251 HES1Q14469 280 aa13.32□□□□□ -0.28
TRAPPC3-207ENST00000497251 ATXN7L3Q14CW9 347 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC3-207ENST00000497251 PAN3Q58A45 887 aaKnown RBP13.32□□□□□ -0.28
TRAPPC3-207ENST00000497251 OGFRL1Q5TC84 451 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC3-207ENST00000497251 TEX38Q6PEX7 206 aa13.32□□□□□ -0.28
TRAPPC3-207ENST00000497251 C10orf99Q6UWK7 81 aa13.32□□□□□ -0.28
TRAPPC3-207ENST00000497251 SLC35E3Q7Z769 313 aa13.32□□□□□ -0.28
TRAPPC3-207ENST00000497251 ZNF329Q86UD4 541 aa13.32□□□□□ -0.28
TRAPPC3-207ENST00000497251 ZNF695Q8IW36 515 aa13.32□□□□□ -0.28
TRAPPC3-207ENST00000497251 DRAM1Q8N682 238 aa13.32□□□□□ -0.28
TRAPPC3-207ENST00000497251 C8orf31Q8N9H6 132 aa13.32□□□□□ -0.28
TRAPPC3-207ENST00000497251 OR5D18Q8NGL1 313 aa13.32□□□□□ -0.28
TRAPPC3-207ENST00000497251 OR56B4Q8NH76 319 aa13.32□□□□□ -0.28
TRAPPC3-207ENST00000497251 CNIH3Q8TBE1 160 aa13.32□□□□□ -0.28
TRAPPC3-207ENST00000497251 CYGBQ8WWM9 190 aa13.32□□□□□ -0.28
TRAPPC3-207ENST00000497251 ISG20L2Q9H9L3 353 aaKnown RBP13.32□□□□□ -0.28
TRAPPC3-207ENST00000497251 KIF25Q9UIL4 384 aa13.32□□□□□ -0.28
TRAPPC3-207ENST00000497251 PSG11Q9UQ72 335 aa13.32□□□□□ -0.28
TRAPPC3-207ENST00000497251 NUDT19A8MXV4 375 aa13.31□□□□□ -0.28
TRAPPC3-207ENST00000497251 AP4M1O00189 453 aa13.31□□□□□ -0.28
TRAPPC3-207ENST00000497251 ZFPL1O95159 310 aa13.31□□□□□ -0.28
TRAPPC3-207ENST00000497251 GAPDHP04406 335 aaKnown RBP13.31□□□□□ -0.28
TRAPPC3-207ENST00000497251 HOXD3P31249 432 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC3-207ENST00000497251 GLP1RP43220 463 aa13.31□□□□□ -0.28
TRAPPC3-207ENST00000497251 GBX2P52951 348 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC3-207ENST00000497251 GABPB1Q06547 395 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC3-207ENST00000497251 ZNF816Q0VGE8 651 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC3-207ENST00000497251 SMN1Q16637 294 aaKnown RBP13.31□□□□□ -0.28
TRAPPC3-207ENST00000497251 Q3ZCU0 254 aa13.31□□□□□ -0.28
TRAPPC3-207ENST00000497251 TGIF2LXQ8IUE1 241 aa13.31□□□□□ -0.28
TRAPPC3-207ENST00000497251 OR51A4Q8NGJ6 313 aa13.31□□□□□ -0.28
TRAPPC3-207ENST00000497251 OR52M1Q8NGK5 317 aa13.31□□□□□ -0.28
TRAPPC3-207ENST00000497251 OR10X1Q8NGY0 326 aa13.31□□□□□ -0.28
TRAPPC3-207ENST00000497251 SPACA5Q96QH8 159 aa13.31□□□□□ -0.28
TRAPPC3-207ENST00000497251 IFT22Q9H7X7 185 aa13.31□□□□□ -0.28
TRAPPC3-207ENST00000497251 DCLRE1BQ9H816 532 aa13.31□□□□□ -0.28
TRAPPC3-207ENST00000497251 SIRT4Q9Y6E7 314 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC3-207ENST00000497251 TRAV24A0A0B4J272 114 aa13.3□□□□□ -0.28
TRAPPC3-207ENST00000497251 LIMS3P0CW19 117 aa13.3□□□□□ -0.28
TRAPPC3-207ENST00000497251 LIMS4P0CW20 117 aa13.3□□□□□ -0.28
TRAPPC3-207ENST00000497251 RAB3AP20336 220 aa13.3□□□□□ -0.28
TRAPPC3-207ENST00000497251 PNLIPRP3Q17RR3 467 aa13.3□□□□□ -0.28
TRAPPC3-207ENST00000497251 NHLRC3Q5JS37 347 aa13.3□□□□□ -0.28
TRAPPC3-207ENST00000497251 C11orf87Q6NUJ2 197 aa13.3□□□□□ -0.28
TRAPPC3-207ENST00000497251 ASCL4Q6XD76 172 aa13.3□□□□□ -0.28
TRAPPC3-207ENST00000497251 STPG2Q8N412 459 aa13.3□□□□□ -0.28
TRAPPC3-207ENST00000497251 OR8H1Q8NGG4 311 aa13.3□□□□□ -0.28
TRAPPC3-207ENST00000497251 OR10AC1Q8NH08 325 aa13.3□□□□□ -0.28
TRAPPC3-207ENST00000497251 PPIL3Q9H2H8 161 aaKnown RBP13.3□□□□□ -0.28
TRAPPC3-207ENST00000497251 VCXQ9H320 206 aa13.3□□□□□ -0.28
TRAPPC3-207ENST00000497251 LIN7CQ9NUP9 197 aaKnown RBP13.3□□□□□ -0.28
TRAPPC3-207ENST00000497251 PAK1IP1Q9NWT1 392 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC3-207ENST00000497251 CHCHD3Q9NX63 227 aaKnown RBP13.3□□□□□ -0.28
TRAPPC3-207ENST00000497251 DHDHQ9UQ10 334 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms