RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 NUDT19A8MXV4 375 aa11.08□□□□□ -0.64
GARNL3-220ENST00000496711 C3orf80F5H4A9 247 aa11.08□□□□□ -0.64
GARNL3-220ENST00000496711 ST8SIA3O43173 380 aa11.08□□□□□ -0.64
GARNL3-220ENST00000496711 JTBO76095 146 aa11.08□□□□□ -0.64
GARNL3-220ENST00000496711 PGA5P0DJD9 388 aa11.08□□□□□ -0.64
GARNL3-220ENST00000496711 TMEM33P57088 247 aa11.08□□□□□ -0.64
GARNL3-220ENST00000496711 ERVK11-1P61568 191 aa11.08□□□□□ -0.64
GARNL3-220ENST00000496711 PSG7Q13046 419 aa11.08□□□□□ -0.64
GARNL3-220ENST00000496711 ZNF154Q13106 437 aa11.08□□□□□ -0.64
GARNL3-220ENST00000496711 ALKBH6Q3KRA9 238 aa11.08□□□□□ -0.64
GARNL3-220ENST00000496711 PCSK4Q6UW60 755 aa11.08□□□□□ -0.64
GARNL3-220ENST00000496711 BPIFCQ8NFQ6 507 aa11.08□□□□□ -0.64
GARNL3-220ENST00000496711 OR4D5Q8NGN0 318 aa11.08□□□□□ -0.64
GARNL3-220ENST00000496711 TMEM56Q96MV1 263 aa11.08□□□□□ -0.64
GARNL3-220ENST00000496711 SPIN2AQ99865 258 aa11.08□□□□□ -0.64
GARNL3-220ENST00000496711 SPIN2BQ9BPZ2 258 aa11.08□□□□□ -0.64
GARNL3-220ENST00000496711 USB1Q9BQ65 265 aaKnown RBP11.08□□□□□ -0.64
GARNL3-220ENST00000496711 NRIP2Q9BQI9 281 aa11.08□□□□□ -0.64
GARNL3-220ENST00000496711 TREM2Q9NZC2 230 aa11.08□□□□□ -0.64
GARNL3-220ENST00000496711 POMT1Q9Y6A1 747 aa11.08□□□□□ -0.64
GARNL3-220ENST00000496711 TMEM56-RWDD3S4R434 201 aa11.08□□□□□ -0.64
GARNL3-220ENST00000496711 CELSR3Q9NYQ7 3312 aa11.08□□□□□ -0.64
GARNL3-220ENST00000496711 INTS1Q8N201 2190 aaKnown RBP11.08□□□□□ -0.64
GARNL3-220ENST00000496711 DUXBA0A1W2PPF3 345 aa11.08□□□□□ -0.64
GARNL3-220ENST00000496711 ZNF705EA8MWA4 302 aaPredicted RBP11.08□□□□□ -0.64
GARNL3-220ENST00000496711 HSD17B6O14756 317 aa11.08□□□□□ -0.64
GARNL3-220ENST00000496711 GPR137BO60478 399 aa11.08□□□□□ -0.64
GARNL3-220ENST00000496711 P2RY1P47900 373 aa11.08□□□□□ -0.64
GARNL3-220ENST00000496711 NOVA1P51513 510 aaKnown RBP11.08□□□□□ -0.64
GARNL3-220ENST00000496711 TCF15Q12870 199 aa11.08□□□□□ -0.64
GARNL3-220ENST00000496711 ZNF169Q14929 603 aaPredicted RBP11.08□□□□□ -0.64
GARNL3-220ENST00000496711 OR8G1Q15617 311 aa11.08□□□□□ -0.64
GARNL3-220ENST00000496711 SHEQ5VZ18 495 aa11.08□□□□□ -0.64
GARNL3-220ENST00000496711 ZNF695Q8IW36 515 aa11.08□□□□□ -0.64
GARNL3-220ENST00000496711 CMTM1Q8IZ96 169 aa11.08□□□□□ -0.64
GARNL3-220ENST00000496711 H1FOOQ8IZA3 346 aaPredicted RBP11.08□□□□□ -0.64
GARNL3-220ENST00000496711 ZADH2Q8N4Q0 377 aa11.08□□□□□ -0.64
GARNL3-220ENST00000496711 BOLLQ8N9W6 283 aaKnown RBP11.08□□□□□ -0.64
GARNL3-220ENST00000496711 WDR31Q8NA23 367 aa11.08□□□□□ -0.64
GARNL3-220ENST00000496711 OR10J5Q8NHC4 309 aa11.08□□□□□ -0.64
GARNL3-220ENST00000496711 KLF14Q8TD94 323 aaPredicted RBP11.08□□□□□ -0.64
GARNL3-220ENST00000496711 SAT2Q96F10 170 aaPredicted RBP11.08□□□□□ -0.64
GARNL3-220ENST00000496711 KIRREL1Q96J84 757 aa11.08□□□□□ -0.64
GARNL3-220ENST00000496711 MS4A7Q9GZW8 240 aaPredicted RBP11.08□□□□□ -0.64
GARNL3-220ENST00000496711 CCL28Q9NRJ3 127 aa11.08□□□□□ -0.64
GARNL3-220ENST00000496711 RCL1Q9Y2P8 373 aaKnown RBP11.08□□□□□ -0.64
GARNL3-220ENST00000496711 AHRRA9YTQ3 701 aa11.07□□□□□ -0.64
GARNL3-220ENST00000496711 NPIPB11E5RHQ5 1161 aa11.07□□□□□ -0.64
GARNL3-220ENST00000496711 SIRPB1O00241 398 aa11.07□□□□□ -0.64
GARNL3-220ENST00000496711 SLC33A1O00400 549 aaPredicted RBP11.07□□□□□ -0.64
GARNL3-220ENST00000496711 AGFG2O95081 481 aa11.07□□□□□ -0.64
GARNL3-220ENST00000496711 NXPH2O95156 264 aa11.07□□□□□ -0.64
GARNL3-220ENST00000496711 OR2H2O95918 312 aa11.07□□□□□ -0.64
GARNL3-220ENST00000496711 APOC3P02656 99 aa11.07□□□□□ -0.64
GARNL3-220ENST00000496711 UCP1P25874 307 aa11.07□□□□□ -0.64
GARNL3-220ENST00000496711 MPV17P39210 176 aa11.07□□□□□ -0.64
GARNL3-220ENST00000496711 FOXF2Q12947 444 aa11.07□□□□□ -0.64
GARNL3-220ENST00000496711 GPR157Q5UAW9 335 aa11.07□□□□□ -0.64
GARNL3-220ENST00000496711 SELENOHQ8IZQ5 122 aaKnown RBP11.07□□□□□ -0.64
GARNL3-220ENST00000496711 NARS2Q96I59 477 aaKnown RBP11.07□□□□□ -0.64
GARNL3-220ENST00000496711 TAAR6Q96RI8 345 aa11.07□□□□□ -0.64
GARNL3-220ENST00000496711 SMIM3Q9BZL3 60 aa11.07□□□□□ -0.64
GARNL3-220ENST00000496711 MMP26Q9NRE1 261 aa11.07□□□□□ -0.64
GARNL3-220ENST00000496711 OR2W1Q9Y3N9 320 aa11.07□□□□□ -0.64
GARNL3-220ENST00000496711 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.06□□□□□ -0.64
GARNL3-220ENST00000496711 NKX2-6A6NCS4 301 aa11.06□□□□□ -0.64
GARNL3-220ENST00000496711 H0Y980 276 aa11.06□□□□□ -0.64
GARNL3-220ENST00000496711 CDIPTO14735 213 aa11.06□□□□□ -0.64
GARNL3-220ENST00000496711 WDR1O75083 606 aa11.06□□□□□ -0.64
GARNL3-220ENST00000496711 S100GP29377 79 aa11.06□□□□□ -0.64
GARNL3-220ENST00000496711 MST1LQ2TV78 715 aa11.06□□□□□ -0.64
GARNL3-220ENST00000496711 ZNF324BQ6AW86 544 aaPredicted RBP11.06□□□□□ -0.64
GARNL3-220ENST00000496711 IL34Q6ZMJ4 242 aa11.06□□□□□ -0.64
GARNL3-220ENST00000496711 ZNF497Q6ZNH5 498 aa11.06□□□□□ -0.64
GARNL3-220ENST00000496711 UBAC2Q8NBM4 344 aa11.06□□□□□ -0.64
GARNL3-220ENST00000496711 PLPPR1Q8TBJ4 325 aa11.06□□□□□ -0.64
GARNL3-220ENST00000496711 ERGIC1Q969X5 290 aa11.06□□□□□ -0.64
GARNL3-220ENST00000496711 SMIM8Q96KF7 97 aa11.06□□□□□ -0.64
GARNL3-220ENST00000496711 PLSCR4Q9NRQ2 329 aa11.06□□□□□ -0.64
GARNL3-220ENST00000496711 ZDHHC8Q9ULC8 765 aa11.06□□□□□ -0.64
GARNL3-220ENST00000496711 PROCRQ9UNN8 238 aa11.06□□□□□ -0.64
GARNL3-220ENST00000496711 SPEF1Q9Y4P9 236 aa11.06□□□□□ -0.64
GARNL3-220ENST00000496711 CNOT1A5YKK6 2376 aaKnown RBP11.06□□□□□ -0.64
GARNL3-220ENST00000496711 H0YL77 283 aa11.06□□□□□ -0.64
GARNL3-220ENST00000496711 MED6O75586 246 aa11.06□□□□□ -0.64
GARNL3-220ENST00000496711 CEACAM1P13688 526 aa11.06□□□□□ -0.64
GARNL3-220ENST00000496711 EIF2S3P41091 472 aaKnown RBP11.06□□□□□ -0.64
GARNL3-220ENST00000496711 SULT1A2P50226 295 aa11.06□□□□□ -0.64
GARNL3-220ENST00000496711 GNMTQ14749 295 aa11.06□□□□□ -0.64
GARNL3-220ENST00000496711 ZNF146Q15072 292 aa11.06□□□□□ -0.64
GARNL3-220ENST00000496711 FIP1L1Q6UN15 594 aaKnown RBP11.06□□□□□ -0.64
GARNL3-220ENST00000496711 CXorf67Q86X51 503 aaPredicted RBP11.06□□□□□ -0.64
GARNL3-220ENST00000496711 DMBX1Q8NFW5 382 aa11.06□□□□□ -0.64
GARNL3-220ENST00000496711 OR8G5Q8NG78 346 aa11.06□□□□□ -0.64
GARNL3-220ENST00000496711 OR5D13Q8NGL4 314 aa11.06□□□□□ -0.64
GARNL3-220ENST00000496711 LILRB1Q8NHL6 650 aaPredicted RBP11.06□□□□□ -0.64
GARNL3-220ENST00000496711 IL22RA2Q969J5 263 aa11.06□□□□□ -0.64
GARNL3-220ENST00000496711 OBP2BQ9NPH6 170 aa11.06□□□□□ -0.64
GARNL3-220ENST00000496711 PURGQ9UJV8 347 aaKnown RBP11.06□□□□□ -0.64
GARNL3-220ENST00000496711 GTF3C1Q12789 2109 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms