RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 CLLU1Q5K131 121 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 TPTE2P1Q5T6R2 138 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 LPCAT4Q643R3 524 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 NPSR1Q6W5P4 371 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 GALNT10Q86SR1 603 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 CBLN2Q8IUK8 224 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 TCTE3Q8IZS6 198 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 HS3ST5Q8IZT8 346 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 STPG2Q8N412 459 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 PACRGLQ8N7B6 248 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 OR1M1Q8NGA1 313 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 OR8U1Q8NH10 309 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 SYNPRQ8TBG9 265 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 DYNC2LI1Q8TCX1 351 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 SFXN5Q8TD22 340 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 FGF14Q92915 247 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 PTH2Q96A98 100 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 PPWD1Q96BP3 646 aaKnown RBP3.34□□□□□ -1.87
SF3B1-212ENST00000496458 CNBD2Q96M20 576 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 RILPQ96NA2 401 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 KLHDC3Q9BQ90 382 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 C2orf88Q9BSF0 95 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 MED18Q9BUE0 208 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 MND1Q9BWT6 205 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 OR51B6Q9H340 312 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 TREM2Q9NZC2 230 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 RNF11Q9Y3C5 154 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 NUBP2Q9Y5Y2 271 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 MTCH2Q9Y6C9 303 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 BRCA2P51587 3418 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 ASTN1O14525 1302 aa3.34□□□□□ -1.87
SF3B1-212ENST00000496458 ARHGAP21Q5T5U3 1957 aa3.34□□□□□ -1.88
SF3B1-212ENST00000496458 TMEM131Q92545 1883 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 IGKV2-28A0A075B6P5 120 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 A0A1B0GVI7 797 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 METTL15A6NJ78 407 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 RFPL4AA6NLU0 287 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 GJE1A6NN92 205 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 E5RI56 91 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 RFPL4AL1F8VTS6 287 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 KCNK1O00180 336 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 CDIPTO14735 213 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 TCAPO15273 167 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 TNRC18O15417 2968 aaPredicted RBP3.33□□□□□ -1.88
SF3B1-212ENST00000496458 RGS5O15539 181 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 CRXO43186 299 aaPredicted RBP3.33□□□□□ -1.88
SF3B1-212ENST00000496458 ENSAO43768 121 aaKnown RBP3.33□□□□□ -1.88
SF3B1-212ENST00000496458 HPGDSO60760 199 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 KCNK2O95069 426 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 WISP3O95389 354 aaPredicted RBP3.33□□□□□ -1.88
SF3B1-212ENST00000496458 RAB36O95755 333 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 HPRT1P00492 218 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 IGKV2D-28P01615 120 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 LINC00614P0C842 121 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 RBMY1CP0DJD4 496 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 FOLR1P15328 257 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 GABRG2P18507 467 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 SHMT2P34897 504 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 GNG10P50151 68 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 ERFP50548 548 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 FABP6P51161 128 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 STC1P52823 247 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 OR10A3P58181 314 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 ZNF121P58317 390 aaPredicted RBP3.33□□□□□ -1.88
SF3B1-212ENST00000496458 PFN3P60673 137 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 SNAP25P60880 206 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 CCL7P80098 99 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 IFITM3Q01628 133 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 TGFBR3Q03167 851 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 ZNF92Q03936 586 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 PNOCQ13519 176 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 GUSBP1Q15486 140 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 GRK1Q15835 563 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 AKIRIN2Q53H80 203 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 PDZD11Q5EBL8 140 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 PABPC1L2AQ5JQF8 200 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 GCSAMLQ5JQS6 135 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 DNLZQ5SXM8 178 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 FAM27D1Q5T7N8 215 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 C11orf71Q6IPW1 123 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 TMEM179Q6ZVK1 233 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 ZNF429Q86V71 674 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 GID4Q8IVV7 300 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 H1FOOQ8IZA3 346 aaPredicted RBP3.33□□□□□ -1.88
SF3B1-212ENST00000496458 DAW1Q8N136 415 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 TMEM35BQ8NCS4 154 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 OR5L1Q8NGL2 311 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 OR5AR1Q8NGP9 310 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 OR2A1Q8NGT9 310 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 ACTL9Q8TC94 416 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 DTD1Q8TEA8 209 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 DOK4Q8TEW6 326 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 DEDD2Q8WXF8 326 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 TMEM54Q969K7 222 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 RPUSD4Q96CM3 377 aaKnown RBP3.33□□□□□ -1.88
SF3B1-212ENST00000496458 TCEAL4Q96EI5 215 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 PPP1R36Q96LQ0 422 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 ZNF488Q96MN9 340 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 RNF145Q96MT1 663 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 APOL4Q9BPW4 351 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms