RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 LAIR2Q6ISS4 152 aa12.63□□□□□ -0.39
HDAC4-213ENST00000496347 NKAIN3Q8N8D7 197 aa12.63□□□□□ -0.39
HDAC4-213ENST00000496347 ZFP41Q8N8Y5 198 aa12.63□□□□□ -0.39
HDAC4-213ENST00000496347 OR13A1Q8NGR1 328 aa12.63□□□□□ -0.39
HDAC4-213ENST00000496347 OR9G1Q8NH87 305 aa12.63□□□□□ -0.39
HDAC4-213ENST00000496347 TFAP2CQ92754 450 aa12.63□□□□□ -0.39
HDAC4-213ENST00000496347 DCLRE1BQ9H816 532 aa12.63□□□□□ -0.39
HDAC4-213ENST00000496347 LIN7BQ9HAP6 207 aa12.63□□□□□ -0.39
HDAC4-213ENST00000496347 SERTAD4Q9NUC0 356 aa12.63□□□□□ -0.39
HDAC4-213ENST00000496347 FKBP14Q9NWM8 211 aa12.63□□□□□ -0.39
HDAC4-213ENST00000496347 FOXJ3Q9UPW0 622 aa12.63□□□□□ -0.39
HDAC4-213ENST00000496347 PRKDCP78527 4128 aaKnown RBP12.62□□□□□ -0.39
HDAC4-213ENST00000496347 TRAV8-7A0A075B6U6 113 aa12.62□□□□□ -0.39
HDAC4-213ENST00000496347 BUB1B-PAK6H3BSN5 160 aa12.62□□□□□ -0.39
HDAC4-213ENST00000496347 CGB3P0DN86 165 aa12.62□□□□□ -0.39
HDAC4-213ENST00000496347 CGB7P0DN87 165 aa12.62□□□□□ -0.39
HDAC4-213ENST00000496347 VSIG10L2P0DP72 767 aa12.62□□□□□ -0.39
HDAC4-213ENST00000496347 GTF2F2P13984 249 aa12.62□□□□□ -0.39
HDAC4-213ENST00000496347 JUNBP17275 347 aaPredicted RBP12.62□□□□□ -0.39
HDAC4-213ENST00000496347 TPTE2P1Q5T6R2 138 aa12.62□□□□□ -0.39
HDAC4-213ENST00000496347 CDH26Q8IXH8 852 aa12.62□□□□□ -0.39
HDAC4-213ENST00000496347 SUMF2Q8NBJ7 301 aa12.62□□□□□ -0.39
HDAC4-213ENST00000496347 OR10A7Q8NGE5 316 aa12.62□□□□□ -0.39
HDAC4-213ENST00000496347 DERL3Q96Q80 235 aa12.62□□□□□ -0.39
HDAC4-213ENST00000496347 MMP28Q9H239 520 aa12.62□□□□□ -0.39
HDAC4-213ENST00000496347 SPACA1Q9HBV2 294 aa12.62□□□□□ -0.39
HDAC4-213ENST00000496347 ING4Q9UNL4 249 aa12.62□□□□□ -0.39
HDAC4-213ENST00000496347 ERGIC3Q9Y282 383 aa12.62□□□□□ -0.39
HDAC4-213ENST00000496347 NOTCH3Q9UM47 2321 aa12.62□□□□□ -0.39
HDAC4-213ENST00000496347 TMEM30CPA0ZSE6 113 aa12.61□□□□□ -0.39
HDAC4-213ENST00000496347 NPIPB11E5RHQ5 1161 aa12.61□□□□□ -0.39
HDAC4-213ENST00000496347 GEMIN2O14893 280 aaKnown RBP12.61□□□□□ -0.39
HDAC4-213ENST00000496347 FBXO24O75426 580 aa12.61□□□□□ -0.39
HDAC4-213ENST00000496347 NFYBP25208 207 aa12.61□□□□□ -0.39
HDAC4-213ENST00000496347 MNDAP41218 407 aa12.61□□□□□ -0.39
HDAC4-213ENST00000496347 DOC2BQ14184 412 aa12.61□□□□□ -0.39
HDAC4-213ENST00000496347 HABP2Q14520 560 aaPredicted RBP12.61□□□□□ -0.39
HDAC4-213ENST00000496347 SLC22A6Q4U2R8 563 aa12.61□□□□□ -0.39
HDAC4-213ENST00000496347 RNLSQ5VYX0 342 aa12.61□□□□□ -0.39
HDAC4-213ENST00000496347 SLC16A12Q6ZSM3 486 aa12.61□□□□□ -0.39
HDAC4-213ENST00000496347 BPIFB6Q8NFQ5 453 aa12.61□□□□□ -0.39
HDAC4-213ENST00000496347 PLPPR1Q8TBJ4 325 aa12.61□□□□□ -0.39
HDAC4-213ENST00000496347 MRGPRDQ8TDS7 321 aa12.61□□□□□ -0.39
HDAC4-213ENST00000496347 WIPF2Q8TF74 440 aaPredicted RBP12.61□□□□□ -0.39
HDAC4-213ENST00000496347 CAPSLQ8WWF8 208 aa12.61□□□□□ -0.39
HDAC4-213ENST00000496347 ORAI1Q96D31 301 aa12.61□□□□□ -0.39
HDAC4-213ENST00000496347 MRPS24Q96EL2 167 aaKnown RBP12.61□□□□□ -0.39
HDAC4-213ENST00000496347 MND1Q9BWT6 205 aa12.61□□□□□ -0.39
HDAC4-213ENST00000496347 IDI2-AS1Q9NZ38 188 aa12.61□□□□□ -0.39
HDAC4-213ENST00000496347 PNMA8CA0A1B0GUJ8 204 aa12.6□□□□□ -0.39
HDAC4-213ENST00000496347 LY6LH3BQJ8 138 aa12.6□□□□□ -0.39
HDAC4-213ENST00000496347 PEX14O75381 377 aa12.6□□□□□ -0.39
HDAC4-213ENST00000496347 OR2F2O95006 317 aa12.6□□□□□ -0.39
HDAC4-213ENST00000496347 CELP19835 753 aa12.6□□□□□ -0.39
HDAC4-213ENST00000496347 SSTR5P35346 364 aa12.6□□□□□ -0.39
HDAC4-213ENST00000496347 VDAC2P45880 294 aaPredicted RBP12.6□□□□□ -0.39
HDAC4-213ENST00000496347 RBM39Q14498 530 aaKnown RBP12.6□□□□□ -0.39
HDAC4-213ENST00000496347 ARSJQ5FYB0 599 aaPredicted RBP12.6□□□□□ -0.39
HDAC4-213ENST00000496347 AWAT2Q6E213 333 aa12.6□□□□□ -0.39
HDAC4-213ENST00000496347 JAGN1Q8N5M9 183 aa12.6□□□□□ -0.39
HDAC4-213ENST00000496347 NANOGP1Q8N7R0 232 aa12.6□□□□□ -0.39
HDAC4-213ENST00000496347 TOMM40LQ969M1 308 aa12.6□□□□□ -0.39
HDAC4-213ENST00000496347 RPEQ96AT9 228 aa12.6□□□□□ -0.39
HDAC4-213ENST00000496347 WNT10AQ9GZT5 417 aa12.6□□□□□ -0.39
HDAC4-213ENST00000496347 RCC2Q9P258 522 aaKnown RBP12.6□□□□□ -0.39
HDAC4-213ENST00000496347 MRPS28Q9Y2Q9 187 aaKnown RBP12.6□□□□□ -0.39
HDAC4-213ENST00000496347 M0QZK8 103 aa12.59□□□□□ -0.39
HDAC4-213ENST00000496347 KCNAB3O43448 404 aa12.59□□□□□ -0.39
HDAC4-213ENST00000496347 CDK1P06493 297 aa12.59□□□□□ -0.39
HDAC4-213ENST00000496347 DEFA6Q01524 100 aa12.59□□□□□ -0.39
HDAC4-213ENST00000496347 MADCAM1Q13477 382 aa12.59□□□□□ -0.39
HDAC4-213ENST00000496347 MUL1Q969V5 352 aa12.59□□□□□ -0.39
HDAC4-213ENST00000496347 UQCC2Q9BRT2 126 aa12.59□□□□□ -0.39
HDAC4-213ENST00000496347 SLC25A33Q9BSK2 321 aa12.59□□□□□ -0.39
HDAC4-213ENST00000496347 ZNF581Q9P0T4 197 aa12.59□□□□□ -0.39
HDAC4-213ENST00000496347 PLXNB1O43157 2135 aa12.59□□□□□ -0.39
HDAC4-213ENST00000496347 FAM90A10PA6NDY2 464 aa12.58□□□□□ -0.4
HDAC4-213ENST00000496347 FAM90A18PA6NE21 464 aa12.58□□□□□ -0.4
HDAC4-213ENST00000496347 FAM90A16PA6NEW6 464 aa12.58□□□□□ -0.4
HDAC4-213ENST00000496347 FAM90A20PA6NIJ5 464 aa12.58□□□□□ -0.4
HDAC4-213ENST00000496347 FAM90A7PA6NKC0 464 aa12.58□□□□□ -0.4
HDAC4-213ENST00000496347 FAM90A12PA8MX19 464 aa12.58□□□□□ -0.4
HDAC4-213ENST00000496347 FAM90A5PA8MXJ8 464 aa12.58□□□□□ -0.4
HDAC4-213ENST00000496347 FAM90A23PA8MXZ1 464 aa12.58□□□□□ -0.4
HDAC4-213ENST00000496347 ANKRD65E5RJM6 399 aa12.58□□□□□ -0.4
HDAC4-213ENST00000496347 J3QR06 171 aa12.58□□□□□ -0.4
HDAC4-213ENST00000496347 OPN1MWP04001 364 aa12.58□□□□□ -0.4
HDAC4-213ENST00000496347 FAM90A15PP0C7V4 464 aa12.58□□□□□ -0.4
HDAC4-213ENST00000496347 FAM90A13PP0C7W8 464 aa12.58□□□□□ -0.4
HDAC4-213ENST00000496347 FAM90A14PP0C7W9 464 aa12.58□□□□□ -0.4
HDAC4-213ENST00000496347 FAM90A24PP0C7X0 464 aa12.58□□□□□ -0.4
HDAC4-213ENST00000496347 OPN1MW2P0DN77 364 aa12.58□□□□□ -0.4
HDAC4-213ENST00000496347 OPN1MW3P0DN78 364 aa12.58□□□□□ -0.4
HDAC4-213ENST00000496347 GZMHP20718 246 aa12.58□□□□□ -0.4
HDAC4-213ENST00000496347 BLCAPP62952 87 aa12.58□□□□□ -0.4
HDAC4-213ENST00000496347 TMEM30BQ3MIR4 351 aa12.58□□□□□ -0.4
HDAC4-213ENST00000496347 ATAD3CQ5T2N8 411 aa12.58□□□□□ -0.4
HDAC4-213ENST00000496347 GLIPR1L1Q6UWM5 242 aa12.58□□□□□ -0.4
HDAC4-213ENST00000496347 ZNF497Q6ZNH5 498 aa12.58□□□□□ -0.4
HDAC4-213ENST00000496347 C11orf44Q8N8P7 122 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms