RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 MRPL30Q8TCC3 161 aaKnown RBP18.04■□□□□ 0.48
ECHDC3-205ENST00000496136 H1FXQ92522 213 aaKnown RBP18.04■□□□□ 0.48
ECHDC3-205ENST00000496136 FUOMA2VDF0 154 aa18.03■□□□□ 0.48
ECHDC3-205ENST00000496136 H7C1Q1 480 aa18.03■□□□□ 0.48
ECHDC3-205ENST00000496136 ZFP36P26651 326 aaKnown RBP18.03■□□□□ 0.48
ECHDC3-205ENST00000496136 PYDC2Q56P42 97 aa18.03■□□□□ 0.48
ECHDC3-205ENST00000496136 LURAP1LQ8IV03 231 aa18.03■□□□□ 0.48
ECHDC3-205ENST00000496136 GPX8Q8TED1 209 aa18.03■□□□□ 0.48
ECHDC3-205ENST00000496136 SRRQ9GZT4 340 aa18.03■□□□□ 0.48
ECHDC3-205ENST00000496136 NCOR1P1Q9H4R4 102 aa18.03■□□□□ 0.48
ECHDC3-205ENST00000496136 ZNF230Q9UIE0 474 aaPredicted RBP18.03■□□□□ 0.48
ECHDC3-205ENST00000496136 ITGB1BP2Q9UKP3 347 aa18.03■□□□□ 0.48
ECHDC3-205ENST00000496136 TRAV39A0A0B4J263 110 aa18.02■□□□□ 0.48
ECHDC3-205ENST00000496136 ODAMA1E959 279 aa18.02■□□□□ 0.48
ECHDC3-205ENST00000496136 HEXAP06865 529 aa18.02■□□□□ 0.48
ECHDC3-205ENST00000496136 RPL31P62899 125 aaKnown RBP18.02■□□□□ 0.48
ECHDC3-205ENST00000496136 DGCR2P98153 550 aa18.02■□□□□ 0.48
ECHDC3-205ENST00000496136 LOXL1Q08397 574 aaPredicted RBP18.02■□□□□ 0.48
ECHDC3-205ENST00000496136 OR52I2Q8NH67 350 aa18.02■□□□□ 0.48
ECHDC3-205ENST00000496136 CCDC107Q8WV48 283 aa18.02■□□□□ 0.48
ECHDC3-205ENST00000496136 TSC22D3Q99576 134 aa18.02■□□□□ 0.48
ECHDC3-205ENST00000496136 OCSTAMPQ9BR26 566 aa18.02■□□□□ 0.48
ECHDC3-205ENST00000496136 DCTN5Q9BTE1 182 aa18.02■□□□□ 0.48
ECHDC3-205ENST00000496136 SCPEP1Q9HB40 452 aa18.02■□□□□ 0.48
ECHDC3-205ENST00000496136 CHMP1AQ9HD42 196 aaPredicted RBP18.02■□□□□ 0.48
ECHDC3-205ENST00000496136 C19orf12Q9NSK7 152 aa18.02■□□□□ 0.48
ECHDC3-205ENST00000496136 TRAPPC2LQ9UL33 140 aa18.02■□□□□ 0.48
ECHDC3-205ENST00000496136 ITPR3Q14573 2671 aa18.02■□□□□ 0.47
ECHDC3-205ENST00000496136 TRBV6-6A0A0A6YYG2 114 aa18.02■□□□□ 0.47
ECHDC3-205ENST00000496136 MEX3AA1L020 520 aaKnown RBP18.02■□□□□ 0.47
ECHDC3-205ENST00000496136 MEIS3P1A6NDR6 274 aa18.02■□□□□ 0.47
ECHDC3-205ENST00000496136 FAM157AC9JC47 383 aa18.02■□□□□ 0.47
ECHDC3-205ENST00000496136 GABARAPH6UMI1 98 aa18.02■□□□□ 0.47
ECHDC3-205ENST00000496136 SULT1C2O00338 296 aa18.02■□□□□ 0.47
ECHDC3-205ENST00000496136 LPLP06858 475 aa18.02■□□□□ 0.47
ECHDC3-205ENST00000496136 FCGR3AP08637 254 aa18.02■□□□□ 0.47
ECHDC3-205ENST00000496136 RCC1P18754 421 aaPredicted RBP18.02■□□□□ 0.47
ECHDC3-205ENST00000496136 MRPS10P82664 201 aaKnown RBP18.02■□□□□ 0.47
ECHDC3-205ENST00000496136 TRAPPC6BQ86SZ2 158 aa18.02■□□□□ 0.47
ECHDC3-205ENST00000496136 FCAMRQ8WWV6 532 aa18.02■□□□□ 0.47
ECHDC3-205ENST00000496136 KLK11Q9UBX7 282 aa18.02■□□□□ 0.47
ECHDC3-205ENST00000496136 WNK2Q9Y3S1 2297 aa18.02■□□□□ 0.47
ECHDC3-205ENST00000496136 ABCA2Q9BZC7 2435 aa18.01■□□□□ 0.47
ECHDC3-205ENST00000496136 KIAA1324LA8MWY0 1029 aaPredicted RBP18.01■□□□□ 0.47
ECHDC3-205ENST00000496136 C11orf91Q3C1V1 193 aa18.01■□□□□ 0.47
ECHDC3-205ENST00000496136 RNASE12Q5GAN4 147 aaKnown RBP18.01■□□□□ 0.47
ECHDC3-205ENST00000496136 ZNF880Q6PDB4 577 aa18.01■□□□□ 0.47
ECHDC3-205ENST00000496136 GVQW1Q8N7I0 195 aa18.01■□□□□ 0.47
ECHDC3-205ENST00000496136 ZNF565Q8N9K5 539 aa18.01■□□□□ 0.47
ECHDC3-205ENST00000496136 SMIM4Q8WVI0 70 aa18.01■□□□□ 0.47
ECHDC3-205ENST00000496136 SDHCQ99643 169 aaPredicted RBP18.01■□□□□ 0.47
ECHDC3-205ENST00000496136 ST6GALNAC5Q9BVH7 336 aa18.01■□□□□ 0.47
ECHDC3-205ENST00000496136 MBNL3Q9NUK0 354 aaKnown RBP18.01■□□□□ 0.47
ECHDC3-205ENST00000496136 POM121CA8CG34 1229 aa18■□□□□ 0.47
ECHDC3-205ENST00000496136 GSTZ1O43708 216 aaPredicted RBP18■□□□□ 0.47
ECHDC3-205ENST00000496136 ECDO95905 644 aaPredicted RBP18■□□□□ 0.47
ECHDC3-205ENST00000496136 DTYMKP23919 212 aa18■□□□□ 0.47
ECHDC3-205ENST00000496136 LCN2P80188 198 aa18■□□□□ 0.47
ECHDC3-205ENST00000496136 MEF2CQ06413 473 aaPredicted RBP18■□□□□ 0.47
ECHDC3-205ENST00000496136 CR1LQ2VPA4 569 aa18■□□□□ 0.47
ECHDC3-205ENST00000496136 TMEM200BQ69YZ2 307 aa18■□□□□ 0.47
ECHDC3-205ENST00000496136 Q8N402 240 aa18■□□□□ 0.47
ECHDC3-205ENST00000496136 GDPD1Q8N9F7 314 aa18■□□□□ 0.47
ECHDC3-205ENST00000496136 MAPK1IP1LQ8NDC0 245 aa18■□□□□ 0.47
ECHDC3-205ENST00000496136 OR13A1Q8NGR1 328 aa18■□□□□ 0.47
ECHDC3-205ENST00000496136 Q9N2K0 584 aa18■□□□□ 0.47
ECHDC3-205ENST00000496136 RPUSD1Q9UJJ7 312 aaKnown RBP18■□□□□ 0.47
ECHDC3-205ENST00000496136 CR1P17927 2039 aa18■□□□□ 0.47
ECHDC3-205ENST00000496136 LOC105371242A0A075B767 164 aa17.99■□□□□ 0.47
ECHDC3-205ENST00000496136 TRBV23-1A0A0A0MS06 115 aa17.99■□□□□ 0.47
ECHDC3-205ENST00000496136 A8MXK9 166 aa17.99■□□□□ 0.47
ECHDC3-205ENST00000496136 C22orf46C9J442 243 aa17.99■□□□□ 0.47
ECHDC3-205ENST00000496136 ZNF846Q147U1 533 aa17.99■□□□□ 0.47
ECHDC3-205ENST00000496136 CD276Q5ZPR3 534 aa17.99■□□□□ 0.47
ECHDC3-205ENST00000496136 TCF23Q7RTU1 214 aa17.99■□□□□ 0.47
ECHDC3-205ENST00000496136 C8orf46Q8TAG6 207 aa17.99■□□□□ 0.47
ECHDC3-205ENST00000496136 SETD6Q8TBK2 473 aa17.99■□□□□ 0.47
ECHDC3-205ENST00000496136 MAFIPQ8WZ33 124 aa17.99■□□□□ 0.47
ECHDC3-205ENST00000496136 OR6C3Q9NZP0 311 aa17.99■□□□□ 0.47
ECHDC3-205ENST00000496136 CREBBPQ92793 2442 aa17.99■□□□□ 0.47
ECHDC3-205ENST00000496136 hADV38S2A0JD32 116 aa17.99■□□□□ 0.47
ECHDC3-205ENST00000496136 FOXH1O75593 365 aa17.99■□□□□ 0.47
ECHDC3-205ENST00000496136 FCER2P06734 321 aa17.99■□□□□ 0.47
ECHDC3-205ENST00000496136 CBX5P45973 191 aa17.99■□□□□ 0.47
ECHDC3-205ENST00000496136 PPP5CP53041 499 aa17.99■□□□□ 0.47
ECHDC3-205ENST00000496136 LY6G5BQ8NDX9 201 aa17.99■□□□□ 0.47
ECHDC3-205ENST00000496136 MRGPRDQ8TDS7 321 aa17.99■□□□□ 0.47
ECHDC3-205ENST00000496136 CORO2AQ92828 525 aa17.99■□□□□ 0.47
ECHDC3-205ENST00000496136 THAP7Q9BT49 309 aaPredicted RBP17.99■□□□□ 0.47
ECHDC3-205ENST00000496136 WDR12Q9GZL7 423 aaKnown RBP17.99■□□□□ 0.47
ECHDC3-205ENST00000496136 MTFP1Q9UDX5 166 aa17.99■□□□□ 0.47
ECHDC3-205ENST00000496136 LINC00312Q9Y6C7 94 aa17.99■□□□□ 0.47
ECHDC3-205ENST00000496136 RBBP9O75884 186 aa17.98■□□□□ 0.47
ECHDC3-205ENST00000496136 CGB3P0DN86 165 aa17.98■□□□□ 0.47
ECHDC3-205ENST00000496136 CGB7P0DN87 165 aa17.98■□□□□ 0.47
ECHDC3-205ENST00000496136 GZMHP20718 246 aa17.98■□□□□ 0.47
ECHDC3-205ENST00000496136 HOGA1Q86XE5 327 aa17.98■□□□□ 0.47
ECHDC3-205ENST00000496136 POLR3KQ9Y2Y1 108 aaPredicted RBP17.98■□□□□ 0.47
ECHDC3-205ENST00000496136 IGKV1D-8A0A087WSZ0 117 aa17.97■□□□□ 0.47
ECHDC3-205ENST00000496136 TRGV10A0A0A0MS01 117 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms