RNA–Protein interactions for RNA: ENST00000496104.1

XPA-204, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-204ENST00000496104 Q6ZSR3 168 aa3.67□□□□□ -1.82
XPA-204ENST00000496104 LINC00336Q6ZUF6 198 aa3.67□□□□□ -1.82
XPA-204ENST00000496104 CCDC121Q6ZUS5 278 aa3.67□□□□□ -1.82
XPA-204ENST00000496104 Q6ZVQ6 151 aa3.67□□□□□ -1.82
XPA-204ENST00000496104 CREB3L2Q70SY1 520 aa3.67□□□□□ -1.82
XPA-204ENST00000496104 MARCH3Q86UD3 253 aa3.67□□□□□ -1.82
XPA-204ENST00000496104 RNF175Q8N4F7 328 aa3.67□□□□□ -1.82
XPA-204ENST00000496104 MS4A15Q8N5U1 240 aa3.67□□□□□ -1.82
XPA-204ENST00000496104 PRR26Q8N8Z3 221 aa3.67□□□□□ -1.82
XPA-204ENST00000496104 PNLDC1Q8NA58 520 aaKnown RBP3.67□□□□□ -1.82
XPA-204ENST00000496104 SLC37A3Q8NCC5 494 aa3.67□□□□□ -1.82
XPA-204ENST00000496104 OR2D3Q8NGH3 330 aa3.67□□□□□ -1.82
XPA-204ENST00000496104 OR4Q3Q8NH05 313 aa3.67□□□□□ -1.82
XPA-204ENST00000496104 TCTEX1D2Q8WW35 142 aa3.67□□□□□ -1.82
XPA-204ENST00000496104 AP3S1Q92572 193 aa3.67□□□□□ -1.82
XPA-204ENST00000496104 UFD1Q92890 307 aa3.67□□□□□ -1.82
XPA-204ENST00000496104 RAB8BQ92930 207 aa3.67□□□□□ -1.82
XPA-204ENST00000496104 SLC35B4Q969S0 331 aa3.67□□□□□ -1.82
XPA-204ENST00000496104 NEDD4LQ96PU5 975 aa3.67□□□□□ -1.82
XPA-204ENST00000496104 STACQ99469 402 aa3.67□□□□□ -1.82
XPA-204ENST00000496104 RNF2Q99496 336 aa3.67□□□□□ -1.82
XPA-204ENST00000496104 PRRT1Q99946 306 aa3.67□□□□□ -1.82
XPA-204ENST00000496104 TM2D3Q9BRN9 247 aa3.67□□□□□ -1.82
XPA-204ENST00000496104 SLC22A4Q9H015 551 aa3.67□□□□□ -1.82
XPA-204ENST00000496104 NAT10Q9H0A0 1025 aaKnown RBP3.67□□□□□ -1.82
XPA-204ENST00000496104 IKZF5Q9H5V7 419 aa3.67□□□□□ -1.82
XPA-204ENST00000496104 ZNF385DQ9H6B1 395 aa3.67□□□□□ -1.82
XPA-204ENST00000496104 PLEKHA1Q9HB21 404 aa3.67□□□□□ -1.82
XPA-204ENST00000496104 FGF20Q9NP95 211 aaPredicted RBP3.67□□□□□ -1.82
XPA-204ENST00000496104 KRCC1Q9NPI7 259 aaPredicted RBP3.67□□□□□ -1.82
XPA-204ENST00000496104 SLC2A9Q9NRM0 540 aa3.67□□□□□ -1.82
XPA-204ENST00000496104 VNN3Q9NY84 501 aa3.67□□□□□ -1.82
XPA-204ENST00000496104 KCNG2Q9UJ96 466 aa3.67□□□□□ -1.82
XPA-204ENST00000496104 USH1CQ9Y6N9 552 aa3.67□□□□□ -1.82
XPA-204ENST00000496104 NUP214P35658 2090 aaPredicted RBP3.67□□□□□ -1.82
XPA-204ENST00000496104 IGKV3D-15A0A087WSY6 115 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 hCG_38984A0A1B0GV85 526 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 IQCMA0A1B0GVH7 501 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 OR5B21A6NL26 309 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 TRDCB7Z8K6 153 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 H7C2Y5 167 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 SAP18O00422 153 aaKnown RBP3.66□□□□□ -1.82
XPA-204ENST00000496104 PLPP1O14494 284 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 SSNA1O43805 119 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 CST8O60676 142 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 HPGDSO60760 199 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 ADAP1O75689 374 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 IGKV3-15P01624 115 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 HLA-AP01891 365 aaKnown RBP3.66□□□□□ -1.82
XPA-204ENST00000496104 HBE1P02100 147 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 RPS17P08708 135 aaKnown RBP3.66□□□□□ -1.82
XPA-204ENST00000496104 RBMY1A1P0DJD3 496 aaKnown RBP3.66□□□□□ -1.82
XPA-204ENST00000496104 IDO1P14902 403 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 ALDH3A1P30838 453 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 FGF9P31371 208 aaPredicted RBP3.66□□□□□ -1.82
XPA-204ENST00000496104 MAGEA12P43365 314 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 PPICP45877 212 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 TTPAP49638 278 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 HNRNPA3P51991 378 aaKnown RBP3.66□□□□□ -1.82
XPA-204ENST00000496104 AP2S1P53680 142 aaPredicted RBP3.66□□□□□ -1.82
XPA-204ENST00000496104 UBE2MP61081 183 aaKnown RBP3.66□□□□□ -1.82
XPA-204ENST00000496104 C2orf54Q08AI8 447 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 RIGQ13278 110 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 TPBGQ13641 420 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 SPCS2Q15005 226 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 TRIP13Q15645 432 aaPredicted RBP3.66□□□□□ -1.82
XPA-204ENST00000496104 TRIM16LQ309B1 348 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 TRMT5Q32P41 509 aaKnown RBP3.66□□□□□ -1.82
XPA-204ENST00000496104 FAM106AQ4KMX7 169 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 ATP6AP1LQ52LC2 224 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 PAPPA-AS1Q5QFB9 102 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 SUMO4Q6EEV6 95 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 DNM1P34Q6PK57 102 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 FRRS1Q6ZNA5 592 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 GDPGP1Q6ZNW5 385 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 ACOT7LQ6ZUV0 252 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 CYS1Q717R9 158 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 HS3ST5Q8IZT8 346 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 STPG2Q8N412 459 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 CCDC54Q8NEL0 328 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 OR4D10Q8NGI6 311 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 OR52H1Q8NGJ2 320 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 OR6F1Q8NGZ6 308 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 OR6X1Q8NH79 312 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 BAALCQ8WXS3 180 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 PTH2Q96A98 100 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 WDR34Q96EX3 536 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 PACRGQ96M98 296 aaPredicted RBP3.66□□□□□ -1.82
XPA-204ENST00000496104 TSPAN32Q96QS1 320 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 AIF1LQ9BQI0 150 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 CABLES2Q9BTV7 478 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 MS4A8Q9BY19 250 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 Q9HAA7 133 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 NOX3Q9HBY0 568 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 TMBIM4Q9HC24 238 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 CLN6Q9NWW5 311 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 SDHAF2Q9NX18 166 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 LGALS13Q9UHV8 139 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 VPREB3Q9UKI3 123 aa3.66□□□□□ -1.82
XPA-204ENST00000496104 SPATA2Q9UM82 520 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms