RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, human

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM53-209	ENST00000495630		G3V2T6	193 aa		13.74	□□□□□ -0.21
TMEM53-209	ENST00000495630		H0YJX3	145 aa		13.74	□□□□□ -0.21
TMEM53-209	ENST00000495630	MTNR1B	P49286	362 aa		13.74	□□□□□ -0.21
TMEM53-209	ENST00000495630	INSL3	P51460	131 aa		13.74	□□□□□ -0.21
TMEM53-209	ENST00000495630	GYS2	P54840	703 aa		13.74	□□□□□ -0.21
TMEM53-209	ENST00000495630	PAX5	Q02548	391 aa		13.74	□□□□□ -0.21
TMEM53-209	ENST00000495630	ZNF260	Q3ZCT1	412 aa		13.74	□□□□□ -0.21
TMEM53-209	ENST00000495630	KDM4D	Q6B0I6	523 aa		13.74	□□□□□ -0.21
TMEM53-209	ENST00000495630	MOB3B	Q86TA1	216 aa		13.74	□□□□□ -0.21
TMEM53-209	ENST00000495630	OR2T10	Q8NGZ9	312 aa		13.74	□□□□□ -0.21
TMEM53-209	ENST00000495630	RFESD	Q8TAC1	157 aa		13.74	□□□□□ -0.21
TMEM53-209	ENST00000495630	RFK	Q969G6	155 aa		13.74	□□□□□ -0.21
TMEM53-209	ENST00000495630	MYRF	Q9Y2G1	1151 aa		13.74	□□□□□ -0.21
TMEM53-209	ENST00000495630	IGHV1-3	A0A0C4DH29	117 aa		13.73	□□□□□ -0.21
TMEM53-209	ENST00000495630	HSD17B6	O14756	317 aa		13.73	□□□□□ -0.21
TMEM53-209	ENST00000495630	RRP9	O43818	475 aa	Known RBP	13.73	□□□□□ -0.21
TMEM53-209	ENST00000495630	IGHG4	P01861	327 aa		13.73	□□□□□ -0.21
TMEM53-209	ENST00000495630	KCNJ3	P48549	501 aa		13.73	□□□□□ -0.21
TMEM53-209	ENST00000495630	GNG10	P50151	68 aa		13.73	□□□□□ -0.21
TMEM53-209	ENST00000495630	CCR9	P51686	369 aa		13.73	□□□□□ -0.21
TMEM53-209	ENST00000495630	LTC4S	Q16873	150 aa		13.73	□□□□□ -0.21
TMEM53-209	ENST00000495630	PAN3	Q58A45	887 aa	Known RBP	13.73	□□□□□ -0.21
TMEM53-209	ENST00000495630	ELP2	Q6IA86	826 aa		13.73	□□□□□ -0.21
TMEM53-209	ENST00000495630	IZUMO1	Q8IYV9	350 aa		13.73	□□□□□ -0.21
TMEM53-209	ENST00000495630		Q8N6K4	173 aa		13.73	□□□□□ -0.21
TMEM53-209	ENST00000495630		Q8N9W7	124 aa		13.73	□□□□□ -0.21
TMEM53-209	ENST00000495630	OR8J1	Q8NGP2	316 aa		13.73	□□□□□ -0.21
TMEM53-209	ENST00000495630	OR13C3	Q8NGS6	347 aa		13.73	□□□□□ -0.21
TMEM53-209	ENST00000495630	OR13C9	Q8NGT0	318 aa		13.73	□□□□□ -0.21
TMEM53-209	ENST00000495630	CNIH3	Q8TBE1	160 aa		13.73	□□□□□ -0.21
TMEM53-209	ENST00000495630	C4orf3	Q8WVX3	66 aa		13.73	□□□□□ -0.21
TMEM53-209	ENST00000495630	ZCCHC4	Q9H5U6	513 aa		13.73	□□□□□ -0.21
TMEM53-209	ENST00000495630	TRAV24	A0A0B4J272	114 aa		13.72	□□□□□ -0.21
TMEM53-209	ENST00000495630	HSPB6	O14558	160 aa		13.72	□□□□□ -0.21
TMEM53-209	ENST00000495630	GZMH	P20718	246 aa		13.72	□□□□□ -0.21
TMEM53-209	ENST00000495630	NANOS3	P60323	173 aa	Known RBP	13.72	□□□□□ -0.21
TMEM53-209	ENST00000495630	ZP1	P60852	638 aa		13.72	□□□□□ -0.21
TMEM53-209	ENST00000495630	FHL3	Q13643	280 aa		13.72	□□□□□ -0.21
TMEM53-209	ENST00000495630	KISS1	Q15726	138 aa		13.72	□□□□□ -0.21
TMEM53-209	ENST00000495630	RSBN1	Q5VWQ0	802 aa	Predicted RBP	13.72	□□□□□ -0.21
TMEM53-209	ENST00000495630	MRGPRD	Q8TDS7	321 aa		13.72	□□□□□ -0.21
TMEM53-209	ENST00000495630	EME1	Q96AY2	570 aa		13.72	□□□□□ -0.21
TMEM53-209	ENST00000495630	NR1H4	Q96RI1	486 aa	Predicted RBP	13.72	□□□□□ -0.21
TMEM53-209	ENST00000495630	PLSCR3	Q9NRY6	295 aa		13.72	□□□□□ -0.21
TMEM53-209	ENST00000495630	LYL1	P12980	280 aa		13.71	□□□□□ -0.21
TMEM53-209	ENST00000495630	CD1B	P29016	333 aa		13.71	□□□□□ -0.21
TMEM53-209	ENST00000495630	CFHR3	Q02985	330 aa		13.71	□□□□□ -0.21
TMEM53-209	ENST00000495630	DOC2B	Q14184	412 aa		13.71	□□□□□ -0.21
TMEM53-209	ENST00000495630	ZDHHC13	Q8IUH4	622 aa		13.71	□□□□□ -0.21
TMEM53-209	ENST00000495630	SBSPON	Q8IVN8	264 aa		13.71	□□□□□ -0.21
TMEM53-209	ENST00000495630	SERPINA12	Q8IW75	414 aa		13.71	□□□□□ -0.21
TMEM53-209	ENST00000495630	OR8H1	Q8NGG4	311 aa		13.71	□□□□□ -0.21
TMEM53-209	ENST00000495630	OR51A4	Q8NGJ6	313 aa		13.71	□□□□□ -0.21
TMEM53-209	ENST00000495630	OR5D14	Q8NGL3	314 aa		13.71	□□□□□ -0.21
TMEM53-209	ENST00000495630	OR10AC1	Q8NH08	325 aa		13.71	□□□□□ -0.21
TMEM53-209	ENST00000495630	RCHY1	Q96PM5	261 aa		13.71	□□□□□ -0.21
TMEM53-209	ENST00000495630	RASL11B	Q9BPW5	248 aa		13.71	□□□□□ -0.21
TMEM53-209	ENST00000495630	POMP	Q9Y244	141 aa		13.71	□□□□□ -0.21
TMEM53-209	ENST00000495630	IGHV3-72	A0A0B4J1Y9	119 aa		13.7	□□□□□ -0.22
TMEM53-209	ENST00000495630		A0A1W2PPE3	182 aa		13.7	□□□□□ -0.22
TMEM53-209	ENST00000495630	SLC16A6	O15403	523 aa		13.7	□□□□□ -0.22
TMEM53-209	ENST00000495630	LY86	O95711	162 aa		13.7	□□□□□ -0.22
TMEM53-209	ENST00000495630	MOS	P00540	346 aa		13.7	□□□□□ -0.22
TMEM53-209	ENST00000495630	HCK	P08631	526 aa		13.7	□□□□□ -0.22
TMEM53-209	ENST00000495630	HTR1A	P08908	422 aa		13.7	□□□□□ -0.22
TMEM53-209	ENST00000495630	VDAC1	P21796	283 aa		13.7	□□□□□ -0.22
TMEM53-209	ENST00000495630	PSMB8	P28062	276 aa		13.7	□□□□□ -0.22
TMEM53-209	ENST00000495630	REG1B	P48304	166 aa		13.7	□□□□□ -0.22
TMEM53-209	ENST00000495630	IL13RA2	Q14627	380 aa		13.7	□□□□□ -0.22
TMEM53-209	ENST00000495630	LINC00311	Q8N616	119 aa		13.7	□□□□□ -0.22
TMEM53-209	ENST00000495630	C8orf31	Q8N9H6	132 aa		13.7	□□□□□ -0.22
TMEM53-209	ENST00000495630	CCDC197	Q8NCU1	140 aa		13.7	□□□□□ -0.22
TMEM53-209	ENST00000495630	PXT1	Q8NFP0	134 aa		13.7	□□□□□ -0.22
TMEM53-209	ENST00000495630	OR11H1	Q8NG94	326 aa		13.7	□□□□□ -0.22
TMEM53-209	ENST00000495630	S1PR3	Q99500	378 aa		13.7	□□□□□ -0.22
TMEM53-209	ENST00000495630	CHCHD6	Q9BRQ6	235 aa		13.7	□□□□□ -0.22
TMEM53-209	ENST00000495630	FAM118A	Q9NWS6	357 aa		13.7	□□□□□ -0.22
TMEM53-209	ENST00000495630	ZNF580	Q9UK33	172 aa		13.7	□□□□□ -0.22
TMEM53-209	ENST00000495630	OR4C45	A6NMZ5	311 aa		13.69	□□□□□ -0.22
TMEM53-209	ENST00000495630	GYG2	O15488	501 aa		13.69	□□□□□ -0.22
TMEM53-209	ENST00000495630	IGF1	P05019	195 aa		13.69	□□□□□ -0.22
TMEM53-209	ENST00000495630	RPSA	P08865	295 aa	Known RBP	13.69	□□□□□ -0.22
TMEM53-209	ENST00000495630	SSTR5	P35346	364 aa		13.69	□□□□□ -0.22
TMEM53-209	ENST00000495630	POLR2I	P36954	125 aa	Known RBP	13.69	□□□□□ -0.22
TMEM53-209	ENST00000495630	ATP6AP1	Q15904	470 aa		13.69	□□□□□ -0.22
TMEM53-209	ENST00000495630	DNAL1	Q4LDG9	190 aa		13.69	□□□□□ -0.22
TMEM53-209	ENST00000495630	ZNF691	Q5VV52	312 aa		13.69	□□□□□ -0.22
TMEM53-209	ENST00000495630	TMEM104	Q8NE00	496 aa		13.69	□□□□□ -0.22
TMEM53-209	ENST00000495630	OR52M1	Q8NGK5	317 aa		13.69	□□□□□ -0.22
TMEM53-209	ENST00000495630	PLPPR1	Q8TBJ4	325 aa		13.69	□□□□□ -0.22
TMEM53-209	ENST00000495630	GABARAPL1	Q9H0R8	117 aa		13.69	□□□□□ -0.22
TMEM53-209	ENST00000495630	CHCHD3	Q9NX63	227 aa	Known RBP	13.69	□□□□□ -0.22
TMEM53-209	ENST00000495630	LCE6A	A0A183	80 aa		13.68	□□□□□ -0.22
TMEM53-209	ENST00000495630	DAPL1	A0PJW8	107 aa		13.68	□□□□□ -0.22
TMEM53-209	ENST00000495630		J3QRE1	110 aa		13.68	□□□□□ -0.22
TMEM53-209	ENST00000495630	SULT1B1	O43704	296 aa		13.68	□□□□□ -0.22
TMEM53-209	ENST00000495630	OR5H8	P0DN80	308 aa		13.68	□□□□□ -0.22
TMEM53-209	ENST00000495630	SOX6	P35712	828 aa		13.68	□□□□□ -0.22
TMEM53-209	ENST00000495630	ALKBH1	Q13686	389 aa	Known RBP	13.68	□□□□□ -0.22
TMEM53-209	ENST00000495630	FAM27D1	Q5T7N8	215 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms