RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 ALG8Q9BVK2 526 aa9.98□□□□□ -0.81
SKA1-205ENST00000494518 FAM192AQ9GZU8 254 aa9.98□□□□□ -0.81
SKA1-205ENST00000494518 ISG20L2Q9H9L3 353 aaKnown RBP9.98□□□□□ -0.81
SKA1-205ENST00000494518 SORL1Q92673 2214 aa9.98□□□□□ -0.81
SKA1-205ENST00000494518 E9PI62 339 aa9.97□□□□□ -0.81
SKA1-205ENST00000494518 SULT1B1O43704 296 aa9.97□□□□□ -0.81
SKA1-205ENST00000494518 CGB3P0DN86 165 aa9.97□□□□□ -0.81
SKA1-205ENST00000494518 CGB7P0DN87 165 aa9.97□□□□□ -0.81
SKA1-205ENST00000494518 MTNR1BP49286 362 aa9.97□□□□□ -0.81
SKA1-205ENST00000494518 CCR9P51686 369 aa9.97□□□□□ -0.81
SKA1-205ENST00000494518 MADCAM1Q13477 382 aa9.97□□□□□ -0.81
SKA1-205ENST00000494518 DEFB136Q30KP8 78 aa9.97□□□□□ -0.81
SKA1-205ENST00000494518 FAM53AQ6NSI3 398 aaPredicted RBP9.97□□□□□ -0.81
SKA1-205ENST00000494518 KCTD20Q7Z5Y7 419 aa9.97□□□□□ -0.81
SKA1-205ENST00000494518 SLC35E3Q7Z769 313 aa9.97□□□□□ -0.81
SKA1-205ENST00000494518 MOB3BQ86TA1 216 aa9.97□□□□□ -0.81
SKA1-205ENST00000494518 THNSL2Q86YJ6 484 aa9.97□□□□□ -0.81
SKA1-205ENST00000494518 ACBD7Q8N6N7 88 aa9.97□□□□□ -0.81
SKA1-205ENST00000494518 OR51A2Q8NGJ7 313 aa9.97□□□□□ -0.81
SKA1-205ENST00000494518 OR10X1Q8NGY0 326 aa9.97□□□□□ -0.81
SKA1-205ENST00000494518 CNIH3Q8TBE1 160 aa9.97□□□□□ -0.81
SKA1-205ENST00000494518 CHPT1Q8WUD6 406 aa9.97□□□□□ -0.81
SKA1-205ENST00000494518 TNFAIP8L1Q8WVP5 186 aa9.97□□□□□ -0.81
SKA1-205ENST00000494518 LGALS12Q96DT0 336 aa9.97□□□□□ -0.81
SKA1-205ENST00000494518 CENPNQ96H22 339 aaPredicted RBP9.97□□□□□ -0.81
SKA1-205ENST00000494518 WWC2-AS2Q96NR7 200 aa9.97□□□□□ -0.81
SKA1-205ENST00000494518 GPER1Q99527 375 aa9.97□□□□□ -0.81
SKA1-205ENST00000494518 PDCD1LG2Q9BQ51 273 aa9.97□□□□□ -0.81
SKA1-205ENST00000494518 GPR61Q9BZJ8 451 aa9.97□□□□□ -0.81
SKA1-205ENST00000494518 PCDHB16Q9NRJ7 776 aa9.97□□□□□ -0.81
SKA1-205ENST00000494518 DYNC2H1Q8NCM8 4307 aaKnown RBP9.96□□□□□ -0.81
SKA1-205ENST00000494518 NCBP2LA6PVI3 153 aaKnown RBP9.96□□□□□ -0.82
SKA1-205ENST00000494518 GABRPO00591 440 aa9.96□□□□□ -0.82
SKA1-205ENST00000494518 ZFPL1O95159 310 aa9.96□□□□□ -0.82
SKA1-205ENST00000494518 HTR3BO95264 441 aa9.96□□□□□ -0.82
SKA1-205ENST00000494518 DBTP11182 482 aaKnown RBP9.96□□□□□ -0.82
SKA1-205ENST00000494518 C21orf33P30042 268 aaPredicted RBP9.96□□□□□ -0.82
SKA1-205ENST00000494518 MYCNOSP40205 109 aa9.96□□□□□ -0.82
SKA1-205ENST00000494518 SOX2P48431 317 aa9.96□□□□□ -0.82
SKA1-205ENST00000494518 LUMP51884 338 aaPredicted RBP9.96□□□□□ -0.82
SKA1-205ENST00000494518 RSBN1Q5VWQ0 802 aaPredicted RBP9.96□□□□□ -0.82
SKA1-205ENST00000494518 STPG2Q8N412 459 aa9.96□□□□□ -0.82
SKA1-205ENST00000494518 ZNF565Q8N9K5 539 aa9.96□□□□□ -0.82
SKA1-205ENST00000494518 PYDC1Q8WXC3 89 aa9.96□□□□□ -0.82
SKA1-205ENST00000494518 RAX2Q96IS3 184 aa9.96□□□□□ -0.82
SKA1-205ENST00000494518 PRR25Q96S07 402 aa9.96□□□□□ -0.82
SKA1-205ENST00000494518 P2RX4Q99571 388 aa9.96□□□□□ -0.82
SKA1-205ENST00000494518 RHOFQ9HBH0 211 aa9.96□□□□□ -0.82
SKA1-205ENST00000494518 AMBNQ9NP70 447 aa9.96□□□□□ -0.82
SKA1-205ENST00000494518 TAS2R4Q9NYW5 299 aa9.96□□□□□ -0.82
SKA1-205ENST00000494518 DHDHQ9UQ10 334 aa9.96□□□□□ -0.82
SKA1-205ENST00000494518 DNAH7Q8WXX0 4024 aa9.96□□□□□ -0.82
SKA1-205ENST00000494518 IGHV3-43A0A0B4J1X8 118 aa9.95□□□□□ -0.82
SKA1-205ENST00000494518 H0YHG0 523 aa9.95□□□□□ -0.82
SKA1-205ENST00000494518 EI24O14681 340 aa9.95□□□□□ -0.82
SKA1-205ENST00000494518 HSD17B6O14756 317 aa9.95□□□□□ -0.82
SKA1-205ENST00000494518 FGF16O43320 207 aa9.95□□□□□ -0.82
SKA1-205ENST00000494518 CDRT1O95170 752 aa9.95□□□□□ -0.82
SKA1-205ENST00000494518 RPLP1P05386 114 aaKnown RBP9.95□□□□□ -0.82
SKA1-205ENST00000494518 IGHV3-43DP0DP04 118 aa9.95□□□□□ -0.82
SKA1-205ENST00000494518 RAB7AP51149 207 aa9.95□□□□□ -0.82
SKA1-205ENST00000494518 SNRPGP62308 76 aaKnown RBP9.95□□□□□ -0.82
SKA1-205ENST00000494518 SLC35B1P78383 322 aa9.95□□□□□ -0.82
SKA1-205ENST00000494518 RSU1Q15404 277 aa9.95□□□□□ -0.82
SKA1-205ENST00000494518 UNQ9370/PRO34162Q6UXP9 181 aa9.95□□□□□ -0.82
SKA1-205ENST00000494518 ZNF695Q8IW36 515 aa9.95□□□□□ -0.82
SKA1-205ENST00000494518 SERPINA12Q8IW75 414 aa9.95□□□□□ -0.82
SKA1-205ENST00000494518 FOXRED2Q8IWF2 684 aa9.95□□□□□ -0.82
SKA1-205ENST00000494518 OR8H3Q8N146 312 aa9.95□□□□□ -0.82
SKA1-205ENST00000494518 SUMF2Q8NBJ7 301 aa9.95□□□□□ -0.82
SKA1-205ENST00000494518 OR5D14Q8NGL3 314 aa9.95□□□□□ -0.82
SKA1-205ENST00000494518 OR5AK2Q8NH90 309 aa9.95□□□□□ -0.82
SKA1-205ENST00000494518 HAVCR2Q8TDQ0 301 aa9.95□□□□□ -0.82
SKA1-205ENST00000494518 TRUB1Q8WWH5 349 aaKnown RBP9.95□□□□□ -0.82
SKA1-205ENST00000494518 MCRIP2Q9BUT9 160 aaKnown RBP9.95□□□□□ -0.82
SKA1-205ENST00000494518 BARHL1Q9BZE3 327 aa9.95□□□□□ -0.82
SKA1-205ENST00000494518 EXOGQ9Y2C4 368 aaKnown RBP9.95□□□□□ -0.82
SKA1-205ENST00000494518 ORC6Q9Y5N6 252 aa9.95□□□□□ -0.82
SKA1-205ENST00000494518 IGHV1-3A0A0C4DH29 117 aa9.94□□□□□ -0.82
SKA1-205ENST00000494518 NPIPB11E5RHQ5 1161 aa9.94□□□□□ -0.82
SKA1-205ENST00000494518 CCL24O00175 119 aa9.94□□□□□ -0.82
SKA1-205ENST00000494518 CCRL2O00421 344 aa9.94□□□□□ -0.82
SKA1-205ENST00000494518 IGHG2P01859 326 aa9.94□□□□□ -0.82
SKA1-205ENST00000494518 ALPLP05186 524 aa9.94□□□□□ -0.82
SKA1-205ENST00000494518 RAB3AP20336 220 aa9.94□□□□□ -0.82
SKA1-205ENST00000494518 GTF2A1P52655 376 aaPredicted RBP9.94□□□□□ -0.82
SKA1-205ENST00000494518 DGCR2P98153 550 aa9.94□□□□□ -0.82
SKA1-205ENST00000494518 GALEQ14376 348 aa9.94□□□□□ -0.82
SKA1-205ENST00000494518 IL13RA2Q14627 380 aa9.94□□□□□ -0.82
SKA1-205ENST00000494518 MEDAGQ5VYS4 303 aa9.94□□□□□ -0.82
SKA1-205ENST00000494518 ELP2Q6IA86 826 aa9.94□□□□□ -0.82
SKA1-205ENST00000494518 PARP16Q8N5Y8 322 aa9.94□□□□□ -0.82
SKA1-205ENST00000494518 PXT1Q8NFP0 134 aa9.94□□□□□ -0.82
SKA1-205ENST00000494518 CCDC107Q8WV48 283 aa9.94□□□□□ -0.82
SKA1-205ENST00000494518 RGP1Q92546 391 aaPredicted RBP9.94□□□□□ -0.82
SKA1-205ENST00000494518 EAF1Q96JC9 268 aaPredicted RBP9.94□□□□□ -0.82
SKA1-205ENST00000494518 DPCDQ9BVM2 203 aaPredicted RBP9.94□□□□□ -0.82
SKA1-205ENST00000494518 ZFP57Q9NU63 452 aa9.94□□□□□ -0.82
SKA1-205ENST00000494518 TMEM212A6NML5 194 aa9.93□□□□□ -0.82
SKA1-205ENST00000494518 ZNF736B4DX44 427 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms