RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 B3GLCTQ6Y288 498 aa2.12□□□□□ -2.07
CDC42EP3-205ENST00000494083 TMEM184AQ6ZMB5 413 aa2.12□□□□□ -2.07
CDC42EP3-205ENST00000494083 FAM219AQ8IW50 185 aa2.12□□□□□ -2.07
CDC42EP3-205ENST00000494083 OR51A4Q8NGJ6 313 aa2.12□□□□□ -2.07
CDC42EP3-205ENST00000494083 OR51G1Q8NGK1 321 aa2.12□□□□□ -2.07
CDC42EP3-205ENST00000494083 SYNPRQ8TBG9 265 aa2.12□□□□□ -2.07
CDC42EP3-205ENST00000494083 CASTOR1Q8WTX7 329 aa2.12□□□□□ -2.07
CDC42EP3-205ENST00000494083 RNF133Q8WVZ7 376 aa2.12□□□□□ -2.07
CDC42EP3-205ENST00000494083 TSEN15Q8WW01 171 aaKnown RBP2.12□□□□□ -2.07
CDC42EP3-205ENST00000494083 RAB1CQ92928 201 aa2.12□□□□□ -2.07
CDC42EP3-205ENST00000494083 ZNF414Q96IQ9 312 aa2.12□□□□□ -2.07
CDC42EP3-205ENST00000494083 JSRP1Q96MG2 331 aaPredicted RBP2.12□□□□□ -2.07
CDC42EP3-205ENST00000494083 SULT4A1Q9BR01 284 aa2.12□□□□□ -2.07
CDC42EP3-205ENST00000494083 CABLES2Q9BTV7 478 aa2.12□□□□□ -2.07
CDC42EP3-205ENST00000494083 GAL3ST2Q9H3Q3 398 aa2.12□□□□□ -2.07
CDC42EP3-205ENST00000494083 SRMSQ9H3Y6 488 aa2.12□□□□□ -2.07
CDC42EP3-205ENST00000494083 ASB8Q9H765 288 aa2.12□□□□□ -2.07
CDC42EP3-205ENST00000494083 CALHM2Q9HA72 323 aa2.12□□□□□ -2.07
CDC42EP3-205ENST00000494083 SDF2L1Q9HCN8 221 aa2.12□□□□□ -2.07
CDC42EP3-205ENST00000494083 MKKSQ9NPJ1 570 aaPredicted RBP2.12□□□□□ -2.07
CDC42EP3-205ENST00000494083 CALML5Q9NZT1 146 aa2.12□□□□□ -2.07
CDC42EP3-205ENST00000494083 MED11Q9P086 117 aa2.12□□□□□ -2.07
CDC42EP3-205ENST00000494083 COMMD3Q9UBI1 195 aa2.12□□□□□ -2.07
CDC42EP3-205ENST00000494083 PEF1Q9UBV8 284 aaKnown RBP2.12□□□□□ -2.07
CDC42EP3-205ENST00000494083 HCFC1P51610 2035 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 VPS13DQ5THJ4 4388 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 IGHV2-70DA0A0C4DH43 119 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 A0A1B0GV90 55 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 PSMB11A5LHX3 300 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 TMEM189A5PLL7 270 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 G3V3Y1 287 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 DCTN6O00399 190 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 ZNF197O14709 1029 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 FLRT2O43155 660 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 NDUFS4O43181 175 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 DUSP11O75319 330 aaKnown RBP2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 SOX14O95416 240 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 CSTAP01040 98 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 CD3DP04234 171 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 DBIP07108 87 aaKnown RBP2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 SRD5A2P31213 254 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 AKT2P31751 481 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 CEBPDP49716 269 aaPredicted RBP2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 FABP9Q0Z7S8 132 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 CLINT1Q14677 625 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 OR8B8Q15620 311 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 USF2Q15853 346 aaPredicted RBP2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 BSXQ3C1V8 233 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 TMEM128Q5BJH2 165 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 FAM78AQ5JUQ0 283 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 MFSD14CQ5VZR4 134 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 ACSM2BQ68CK6 577 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 ZNF343Q6P1L6 599 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 TEX38Q6PEX7 206 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 SLC24A5Q71RS6 500 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 CHMP1BQ7LBR1 199 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 COX8CQ7Z4L0 72 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 CEACAM19Q7Z692 300 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 FJX1Q86VR8 437 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 RANBP3LQ86VV4 465 aaPredicted RBP2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 TEX45Q8NA69 505 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 OR10A7Q8NGE5 316 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 OR10AC1Q8NH08 325 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 TMEM239Q8WW34 195 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 ASZ1Q8WWH4 475 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 TCEAL3Q969E4 200 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 GLYATL1Q969I3 302 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 NABP1Q96AH0 204 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 FAM122AQ96E09 287 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 AKR1E2Q96JD6 320 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 LRRC3BQ96PB8 259 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 ZNF607Q96SK3 696 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 TIMM29Q9BSF4 260 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 OR8D2Q9GZM6 311 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 S1PR5Q9H228 398 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 C6orf106Q9H6K1 298 aaPredicted RBP2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 PTGES2Q9H7Z7 377 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 LPAR2Q9HBW0 351 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 AMBNQ9NP70 447 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 KRCC1Q9NPI7 259 aaPredicted RBP2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 GPR84Q9NQS5 396 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 DOK5Q9P104 306 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 MDFICQ9P1T7 246 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 PXMP4Q9Y6I8 212 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 PPIAL4EA0A075B759 164 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 PPIAL4CA0A0B4J2A2 164 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 IGKV1-9A0A0C4DH69 117 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 CBY3A6NI87 242 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 PPP5D1E7EU14 171 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 PPIAL4DF5H284 164 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 GOSR2O14653 212 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 RAMP1O60894 148 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 NXPH2O95156 264 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 SIX6O95475 246 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 CTSDP07339 412 aaPredicted RBP2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 RNF224P0DH78 156 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 CT45A8P0DMV1 189 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 CT45A9P0DMV2 189 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 PPIAL4FP0DN26 164 aa2.11□□□□□ -2.07
CDC42EP3-205ENST00000494083 BCKDHBP21953 392 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms