RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 ZNF107Q9UII5 783 aaPredicted RBP9.48□□□□□ -0.89
MCF2L-231ENST00000494043 KIF25Q9UIL4 384 aa9.48□□□□□ -0.89
MCF2L-231ENST00000494043 NAV2Q8IVL1 2488 aa9.47□□□□□ -0.89
MCF2L-231ENST00000494043 DVL1O14640 695 aa9.47□□□□□ -0.89
MCF2L-231ENST00000494043 NDUFB3O43676 98 aa9.47□□□□□ -0.89
MCF2L-231ENST00000494043 FCN3O75636 299 aa9.47□□□□□ -0.89
MCF2L-231ENST00000494043 FCER2P06734 321 aa9.47□□□□□ -0.89
MCF2L-231ENST00000494043 ERP29P30040 261 aaKnown RBP9.47□□□□□ -0.89
MCF2L-231ENST00000494043 GLIPR1P48060 266 aa9.47□□□□□ -0.89
MCF2L-231ENST00000494043 DSCR9P59020 149 aa9.47□□□□□ -0.89
MCF2L-231ENST00000494043 SRSF7Q16629 238 aaKnown RBP eCLIP9.47□□□□□ -0.89
MCF2L-231ENST00000494043 DEFB113Q30KQ7 82 aa9.47□□□□□ -0.89
MCF2L-231ENST00000494043 LRRC10Q5BKY1 277 aa9.47□□□□□ -0.89
MCF2L-231ENST00000494043 OR52W1Q6IF63 320 aa9.47□□□□□ -0.89
MCF2L-231ENST00000494043 Q6ZS49 121 aa9.47□□□□□ -0.89
MCF2L-231ENST00000494043 NLRC3Q7RTR2 1065 aa9.47□□□□□ -0.89
MCF2L-231ENST00000494043 LRRC75A-AS1Q8N1F1 130 aa9.47□□□□□ -0.89
MCF2L-231ENST00000494043 FGFRL1Q8N441 504 aa9.47□□□□□ -0.89
MCF2L-231ENST00000494043 TMEM229BQ8NBD8 167 aa9.47□□□□□ -0.89
MCF2L-231ENST00000494043 BEST4Q8NFU0 473 aa9.47□□□□□ -0.89
MCF2L-231ENST00000494043 OR8B3Q8NGG8 313 aa9.47□□□□□ -0.89
MCF2L-231ENST00000494043 SETD6Q8TBK2 473 aa9.47□□□□□ -0.89
MCF2L-231ENST00000494043 C10orf105Q8TEF2 133 aa9.47□□□□□ -0.89
MCF2L-231ENST00000494043 FAM168AQ92567 244 aa9.47□□□□□ -0.89
MCF2L-231ENST00000494043 NINJ1Q92982 152 aa9.47□□□□□ -0.89
MCF2L-231ENST00000494043 MBD6Q96DN6 1003 aa9.47□□□□□ -0.89
MCF2L-231ENST00000494043 NEIL1Q96FI4 390 aaPredicted RBP9.47□□□□□ -0.89
MCF2L-231ENST00000494043 OR8B2Q96RD0 313 aa9.47□□□□□ -0.89
MCF2L-231ENST00000494043 PIMREGQ9BSJ6 248 aa9.47□□□□□ -0.89
MCF2L-231ENST00000494043 BPESC1Q9GZL8 116 aa9.47□□□□□ -0.89
MCF2L-231ENST00000494043 NCOR1P1Q9H4R4 102 aa9.47□□□□□ -0.89
MCF2L-231ENST00000494043 ZNF286AQ9HBT8 521 aa9.47□□□□□ -0.89
MCF2L-231ENST00000494043 Q9N2K0 584 aa9.47□□□□□ -0.89
MCF2L-231ENST00000494043 TBC1D24Q9ULP9 559 aa9.47□□□□□ -0.89
MCF2L-231ENST00000494043 ANKRD17O75179 2603 aaKnown RBP9.46□□□□□ -0.89
MCF2L-231ENST00000494043 IGKV1D-8A0A087WSZ0 117 aa9.46□□□□□ -0.9
MCF2L-231ENST00000494043 MEIKINA0A087WXM9 373 aa9.46□□□□□ -0.9
MCF2L-231ENST00000494043 LINC00854A0A1B0GVQ3 168 aa9.46□□□□□ -0.9
MCF2L-231ENST00000494043 ODAMA1E959 279 aa9.46□□□□□ -0.9
MCF2L-231ENST00000494043 FUOMA2VDF0 154 aa9.46□□□□□ -0.9
MCF2L-231ENST00000494043 VWC2LB2RUY7 222 aa9.46□□□□□ -0.9
MCF2L-231ENST00000494043 ZNF736B4DX44 427 aaPredicted RBP9.46□□□□□ -0.9
MCF2L-231ENST00000494043 F5H0A9 414 aaPredicted RBP9.46□□□□□ -0.9
MCF2L-231ENST00000494043 CD74P04233 296 aa9.46□□□□□ -0.9
MCF2L-231ENST00000494043 CD3DP04234 171 aa9.46□□□□□ -0.9
MCF2L-231ENST00000494043 WNT2P09544 360 aa9.46□□□□□ -0.9
MCF2L-231ENST00000494043 NDUFB7P17568 137 aa9.46□□□□□ -0.9
MCF2L-231ENST00000494043 RCC1P18754 421 aaPredicted RBP9.46□□□□□ -0.9
MCF2L-231ENST00000494043 TBPP20226 339 aa9.46□□□□□ -0.9
MCF2L-231ENST00000494043 HLA-DMAP28067 261 aa9.46□□□□□ -0.9
MCF2L-231ENST00000494043 EDDM3BP56851 147 aa9.46□□□□□ -0.9
MCF2L-231ENST00000494043 TAS2R19P59542 299 aa9.46□□□□□ -0.9
MCF2L-231ENST00000494043 ASAH1Q13510 395 aa9.46□□□□□ -0.9
MCF2L-231ENST00000494043 DYRK1AQ13627 763 aa9.46□□□□□ -0.9
MCF2L-231ENST00000494043 ACTBL2Q562R1 376 aa9.46□□□□□ -0.9
MCF2L-231ENST00000494043 ZNF841Q6ZN19 808 aa9.46□□□□□ -0.9
MCF2L-231ENST00000494043 TPRX1Q8N7U7 411 aa9.46□□□□□ -0.9
MCF2L-231ENST00000494043 CCDC107Q8WV48 283 aa9.46□□□□□ -0.9
MCF2L-231ENST00000494043 DEDD2Q8WXF8 326 aa9.46□□□□□ -0.9
MCF2L-231ENST00000494043 COX4I2Q96KJ9 171 aa9.46□□□□□ -0.9
MCF2L-231ENST00000494043 LURAP1Q96LR2 239 aa9.46□□□□□ -0.9
MCF2L-231ENST00000494043 NARFLQ9H6Q4 476 aa9.46□□□□□ -0.9
MCF2L-231ENST00000494043 PATZ1Q9HBE1 687 aaKnown RBP9.46□□□□□ -0.9
MCF2L-231ENST00000494043 MBNL3Q9NUK0 354 aaKnown RBP9.46□□□□□ -0.9
MCF2L-231ENST00000494043 ANXA10Q9UJ72 324 aa9.46□□□□□ -0.9
MCF2L-231ENST00000494043 TRAPPC2LQ9UL33 140 aa9.46□□□□□ -0.9
MCF2L-231ENST00000494043 MGAT4AQ9UM21 535 aa9.46□□□□□ -0.9
MCF2L-231ENST00000494043 PCDHB10Q9UN67 800 aa9.46□□□□□ -0.9
MCF2L-231ENST00000494043 TRAV39A0A0B4J263 110 aa9.45□□□□□ -0.9
MCF2L-231ENST00000494043 KIR2DS1A0A191URI9 304 aa9.45□□□□□ -0.9
MCF2L-231ENST00000494043 TRDCB7Z8K6 153 aa9.45□□□□□ -0.9
MCF2L-231ENST00000494043 PLA2G10O15496 165 aa9.45□□□□□ -0.9
MCF2L-231ENST00000494043 IGHV2-5P01817 119 aa9.45□□□□□ -0.9
MCF2L-231ENST00000494043 AKAIN1P0CW23 69 aa9.45□□□□□ -0.9
MCF2L-231ENST00000494043 GLP1RP43220 463 aa9.45□□□□□ -0.9
MCF2L-231ENST00000494043 KIR2DS4P43632 304 aa9.45□□□□□ -0.9
MCF2L-231ENST00000494043 TAS2R46P59540 309 aa9.45□□□□□ -0.9
MCF2L-231ENST00000494043 DEFA1P59665 94 aa9.45□□□□□ -0.9
MCF2L-231ENST00000494043 DEFA3P59666 94 aa9.45□□□□□ -0.9
MCF2L-231ENST00000494043 HLA-DRB3P79483 266 aa9.45□□□□□ -0.9
MCF2L-231ENST00000494043 KIR2DS1Q14954 304 aa9.45□□□□□ -0.9
MCF2L-231ENST00000494043 HMGN3Q15651 99 aa9.45□□□□□ -0.9
MCF2L-231ENST00000494043 CHRFAM7AQ494W8 412 aa9.45□□□□□ -0.9
MCF2L-231ENST00000494043 C6orf183Q5T699 404 aa9.45□□□□□ -0.9
MCF2L-231ENST00000494043 STEAP1BQ6NZ63 245 aa9.45□□□□□ -0.9
MCF2L-231ENST00000494043 OR5AP2Q8NGF4 316 aa9.45□□□□□ -0.9
MCF2L-231ENST00000494043 OR13A1Q8NGR1 328 aa9.45□□□□□ -0.9
MCF2L-231ENST00000494043 MRGPRDQ8TDS7 321 aa9.45□□□□□ -0.9
MCF2L-231ENST00000494043 C7orf50Q9BRJ6 194 aaKnown RBP9.45□□□□□ -0.9
MCF2L-231ENST00000494043 C11orf54Q9H0W9 315 aaPredicted RBP9.45□□□□□ -0.9
MCF2L-231ENST00000494043 OR6C3Q9NZP0 311 aa9.45□□□□□ -0.9
MCF2L-231ENST00000494043 IGHV4-30-2A0A087WSY4 118 aa9.44□□□□□ -0.9
MCF2L-231ENST00000494043 M0QYG6 137 aa9.44□□□□□ -0.9
MCF2L-231ENST00000494043 GPR37O15354 613 aa9.44□□□□□ -0.9
MCF2L-231ENST00000494043 FABP7O15540 132 aa9.44□□□□□ -0.9
MCF2L-231ENST00000494043 LYRM1O43325 122 aa9.44□□□□□ -0.9
MCF2L-231ENST00000494043 RAB3DO95716 219 aa9.44□□□□□ -0.9
MCF2L-231ENST00000494043 HRH1P35367 487 aa9.44□□□□□ -0.9
MCF2L-231ENST00000494043 FAUP35544 74 aaKnown RBP9.44□□□□□ -0.9
MCF2L-231ENST00000494043 NPY4RP50391 375 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms