RNA–Protein interactions for RNA: ENST00000493518.5

CACUL1-206, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-206ENST00000493518 RBM11P57052 281 aaKnown RBP13.41□□□□□ -0.26
CACUL1-206ENST00000493518 IL13RA2Q14627 380 aa13.41□□□□□ -0.26
CACUL1-206ENST00000493518 RAB35Q15286 201 aa13.41□□□□□ -0.26
CACUL1-206ENST00000493518 CADM4Q8NFZ8 388 aa13.41□□□□□ -0.26
CACUL1-206ENST00000493518 HLA-CQ95604 372 aa13.41□□□□□ -0.26
CACUL1-206ENST00000493518 INTS12Q96CB8 462 aaKnown RBP13.41□□□□□ -0.26
CACUL1-206ENST00000493518 METTL1Q9UBP6 276 aaKnown RBP13.41□□□□□ -0.26
CACUL1-206ENST00000493518 CFAP47Q6ZTR5 3102 aa13.4□□□□□ -0.26
CACUL1-206ENST00000493518 IGLV3-12A0A075B6K2 115 aa13.4□□□□□ -0.26
CACUL1-206ENST00000493518 DSCR4P56555 118 aaPredicted RBP13.4□□□□□ -0.26
CACUL1-206ENST00000493518 NKX6-1P78426 367 aaPredicted RBP13.4□□□□□ -0.26
CACUL1-206ENST00000493518 LHFPL2Q6ZUX7 228 aa13.4□□□□□ -0.26
CACUL1-206ENST00000493518 WFIKKN1Q96NZ8 548 aa13.4□□□□□ -0.26
CACUL1-206ENST00000493518 SSX3Q99909 188 aa13.4□□□□□ -0.26
CACUL1-206ENST00000493518 PRRG4Q9BZD6 226 aa13.4□□□□□ -0.26
CACUL1-206ENST00000493518 WNT5BQ9H1J7 359 aa13.4□□□□□ -0.26
CACUL1-206ENST00000493518 OR51M1Q9H341 326 aa13.4□□□□□ -0.26
CACUL1-206ENST00000493518 TMED3Q9Y3Q3 217 aa13.4□□□□□ -0.26
CACUL1-206ENST00000493518 MED13Q9UHV7 2174 aa13.4□□□□□ -0.26
CACUL1-206ENST00000493518 FAM166BA8MTA8 275 aa13.4□□□□□ -0.26
CACUL1-206ENST00000493518 CEBPZOSA8MTT3 80 aa13.4□□□□□ -0.26
CACUL1-206ENST00000493518 TRDCB7Z8K6 153 aa13.4□□□□□ -0.26
CACUL1-206ENST00000493518 C9J4A7 227 aa13.4□□□□□ -0.26
CACUL1-206ENST00000493518 KCNMB1Q16558 191 aa13.4□□□□□ -0.26
CACUL1-206ENST00000493518 SLC25A53Q5H9E4 307 aa13.4□□□□□ -0.26
CACUL1-206ENST00000493518 SPANXN5Q5MJ07 72 aa13.4□□□□□ -0.26
CACUL1-206ENST00000493518 LRP11Q86VZ4 500 aa13.4□□□□□ -0.26
CACUL1-206ENST00000493518 FADS6Q8N9I5 356 aa13.4□□□□□ -0.26
CACUL1-206ENST00000493518 TMEM54Q969K7 222 aa13.4□□□□□ -0.26
CACUL1-206ENST00000493518 OR2H1Q9GZK4 316 aa13.4□□□□□ -0.26
CACUL1-206ENST00000493518 PLEKHF2Q9H8W4 249 aa13.4□□□□□ -0.26
CACUL1-206ENST00000493518 PLA2G3Q9NZ20 509 aa13.4□□□□□ -0.26
CACUL1-206ENST00000493518 RBMXL2O75526 392 aaKnown RBP13.39□□□□□ -0.27
CACUL1-206ENST00000493518 UMODP07911 640 aa13.39□□□□□ -0.27
CACUL1-206ENST00000493518 PSG2P11465 335 aa13.39□□□□□ -0.27
CACUL1-206ENST00000493518 RNF212Q495C1 297 aa13.39□□□□□ -0.27
CACUL1-206ENST00000493518 SPSB3Q6PJ21 355 aa13.39□□□□□ -0.27
CACUL1-206ENST00000493518 MRPL21Q7Z2W9 205 aaKnown RBP13.39□□□□□ -0.27
CACUL1-206ENST00000493518 LINC00469Q8N7U9 141 aa13.39□□□□□ -0.27
CACUL1-206ENST00000493518 TMEM222Q9H0R3 208 aa13.39□□□□□ -0.27
CACUL1-206ENST00000493518 PROK2Q9HC23 129 aa13.39□□□□□ -0.27
CACUL1-206ENST00000493518 STRAPQ9Y3F4 350 aaKnown RBP13.39□□□□□ -0.27
CACUL1-206ENST00000493518 ECI1P42126 302 aa13.39□□□□□ -0.27
CACUL1-206ENST00000493518 CXCL12P48061 93 aa13.39□□□□□ -0.27
CACUL1-206ENST00000493518 S100A12P80511 92 aa13.39□□□□□ -0.27
CACUL1-206ENST00000493518 KMT5CQ86Y97 462 aa13.39□□□□□ -0.27
CACUL1-206ENST00000493518 MED12LQ86YW9 2145 aa13.39□□□□□ -0.27
CACUL1-206ENST00000493518 ZNF100Q8IYN0 542 aa13.39□□□□□ -0.27
CACUL1-206ENST00000493518 SELENOHQ8IZQ5 122 aaKnown RBP13.39□□□□□ -0.27
CACUL1-206ENST00000493518 GALNT14Q96FL9 552 aa13.39□□□□□ -0.27
CACUL1-206ENST00000493518 HES7Q9BYE0 225 aa13.39□□□□□ -0.27
CACUL1-206ENST00000493518 GAR1Q9NY12 217 aaKnown RBP13.39□□□□□ -0.27
CACUL1-206ENST00000493518 RRP8O43159 456 aaKnown RBP13.39□□□□□ -0.27
CACUL1-206ENST00000493518 LILRA1O75019 489 aa13.39□□□□□ -0.27
CACUL1-206ENST00000493518 C10orf128Q5T292 105 aa13.39□□□□□ -0.27
CACUL1-206ENST00000493518 HIST2H3PS2Q5TEC6 136 aa13.39□□□□□ -0.27
CACUL1-206ENST00000493518 RTL6Q6ICC9 239 aa13.39□□□□□ -0.27
CACUL1-206ENST00000493518 FAM53AQ6NSI3 398 aaPredicted RBP13.39□□□□□ -0.27
CACUL1-206ENST00000493518 C20orf204Q6ZNR8 217 aa13.39□□□□□ -0.27
CACUL1-206ENST00000493518 STX12Q86Y82 276 aa13.39□□□□□ -0.27
CACUL1-206ENST00000493518 ZNF610Q8N9Z0 462 aa13.39□□□□□ -0.27
CACUL1-206ENST00000493518 IFI44Q8TCB0 444 aa13.39□□□□□ -0.27
CACUL1-206ENST00000493518 RPUSD4Q96CM3 377 aaKnown RBP13.39□□□□□ -0.27
CACUL1-206ENST00000493518 C12orf49Q9H741 205 aa13.39□□□□□ -0.27
CACUL1-206ENST00000493518 PISDQ9UG56 409 aa13.39□□□□□ -0.27
CACUL1-206ENST00000493518 TUSC2O75896 110 aa13.38□□□□□ -0.27
CACUL1-206ENST00000493518 CELA3AP09093 270 aa13.38□□□□□ -0.27
CACUL1-206ENST00000493518 CRYGSP22914 178 aa13.38□□□□□ -0.27
CACUL1-206ENST00000493518 ALDH3B1P43353 468 aa13.38□□□□□ -0.27
CACUL1-206ENST00000493518 RAB5CP51148 216 aa13.38□□□□□ -0.27
CACUL1-206ENST00000493518 FUT6P51993 359 aa13.38□□□□□ -0.27
CACUL1-206ENST00000493518 MLF1P58340 268 aa13.38□□□□□ -0.27
CACUL1-206ENST00000493518 PRDX4Q13162 271 aa13.38□□□□□ -0.27
CACUL1-206ENST00000493518 COL19A1Q14993 1142 aa13.38□□□□□ -0.27
CACUL1-206ENST00000493518 ADIRFQ15847 76 aa13.38□□□□□ -0.27
CACUL1-206ENST00000493518 HEPN1Q6WQI6 88 aa13.38□□□□□ -0.27
CACUL1-206ENST00000493518 OR4D5Q8NGN0 318 aa13.38□□□□□ -0.27
CACUL1-206ENST00000493518 MEGF10Q96KG7 1140 aa13.38□□□□□ -0.27
CACUL1-206ENST00000493518 TINAGQ9UJW2 476 aa13.38□□□□□ -0.27
CACUL1-206ENST00000493518 ZNF816-ZNF321PA0A0X1KG74 233 aa13.38□□□□□ -0.27
CACUL1-206ENST00000493518 SLC22A20A6NK97 555 aa13.38□□□□□ -0.27
CACUL1-206ENST00000493518 IFITM10A6NMD0 228 aa13.38□□□□□ -0.27
CACUL1-206ENST00000493518 VAMP5O95183 116 aa13.38□□□□□ -0.27
CACUL1-206ENST00000493518 IGHV2-5P01817 119 aa13.38□□□□□ -0.27
CACUL1-206ENST00000493518 SRP19P09132 144 aaKnown RBP13.38□□□□□ -0.27
CACUL1-206ENST00000493518 FOLR2P14207 255 aa13.38□□□□□ -0.27
CACUL1-206ENST00000493518 DTYMKP23919 212 aa13.38□□□□□ -0.27
CACUL1-206ENST00000493518 RAC1P63000 192 aa13.38□□□□□ -0.27
CACUL1-206ENST00000493518 ARF1P84077 181 aaKnown RBP13.38□□□□□ -0.27
CACUL1-206ENST00000493518 HERPUD1Q15011 391 aa13.38□□□□□ -0.27
CACUL1-206ENST00000493518 MUCL1Q96DR8 90 aa13.38□□□□□ -0.27
CACUL1-206ENST00000493518 ZNF552Q9H707 407 aaPredicted RBP13.38□□□□□ -0.27
CACUL1-206ENST00000493518 UFSP2Q9NUQ7 469 aa13.38□□□□□ -0.27
CACUL1-206ENST00000493518 CACNG5Q9UF02 275 aa13.38□□□□□ -0.27
CACUL1-206ENST00000493518 FOXD3Q9UJU5 478 aaPredicted RBP13.38□□□□□ -0.27
CACUL1-206ENST00000493518 GAB2Q9UQC2 676 aa13.38□□□□□ -0.27
CACUL1-206ENST00000493518 C10orf142B7Z368 130 aa13.37□□□□□ -0.27
CACUL1-206ENST00000493518 PPP1R2P9O14990 202 aa13.37□□□□□ -0.27
CACUL1-206ENST00000493518 MRPL33O75394 65 aaKnown RBP13.37□□□□□ -0.27
CACUL1-206ENST00000493518 IFNA5P01569 189 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms