RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 TMEM65Q6PI78 240 aa11.01□□□□□ -0.65
PRPF40A-211ENST00000493468 SAXO1Q8IYX7 474 aa11.01□□□□□ -0.65
PRPF40A-211ENST00000493468 DEFB107AQ8IZN7 70 aa11.01□□□□□ -0.65
PRPF40A-211ENST00000493468 Q8N1Y9 231 aa11.01□□□□□ -0.65
PRPF40A-211ENST00000493468 DLX4Q92988 240 aaPredicted RBP11.01□□□□□ -0.65
PRPF40A-211ENST00000493468 ST6GALNAC6Q969X2 333 aa11.01□□□□□ -0.65
PRPF40A-211ENST00000493468 OPALINQ96PE5 141 aa11.01□□□□□ -0.65
PRPF40A-211ENST00000493468 ING3Q9NXR8 418 aa11.01□□□□□ -0.65
PRPF40A-211ENST00000493468 TVP23BQ9NYZ1 205 aa11.01□□□□□ -0.65
PRPF40A-211ENST00000493468 KIF25Q9UIL4 384 aa11.01□□□□□ -0.65
PRPF40A-211ENST00000493468 MEIKINA0A087WXM9 373 aa11□□□□□ -0.65
PRPF40A-211ENST00000493468 MAGEA13PA6NCF6 341 aa11□□□□□ -0.65
PRPF40A-211ENST00000493468 H3BSH0 61 aa11□□□□□ -0.65
PRPF40A-211ENST00000493468 DEGS1O15121 323 aa11□□□□□ -0.65
PRPF40A-211ENST00000493468 RPP14O95059 124 aaKnown RBP11□□□□□ -0.65
PRPF40A-211ENST00000493468 CST1P01037 141 aa11□□□□□ -0.65
PRPF40A-211ENST00000493468 IFNA6P05013 189 aa11□□□□□ -0.65
PRPF40A-211ENST00000493468 RAP2AP10114 183 aa11□□□□□ -0.65
PRPF40A-211ENST00000493468 HTR1FP30939 366 aa11□□□□□ -0.65
PRPF40A-211ENST00000493468 MTNR1BP49286 362 aa11□□□□□ -0.65
PRPF40A-211ENST00000493468 CDK5R1Q15078 307 aa11□□□□□ -0.65
PRPF40A-211ENST00000493468 TMEM179BQ7Z7N9 219 aa11□□□□□ -0.65
PRPF40A-211ENST00000493468 SGPP2Q8IWX5 399 aa11□□□□□ -0.65
PRPF40A-211ENST00000493468 LINC00311Q8N616 119 aa11□□□□□ -0.65
PRPF40A-211ENST00000493468 YIPF7Q8N8F6 280 aa11□□□□□ -0.65
PRPF40A-211ENST00000493468 C8orf31Q8N9H6 132 aa11□□□□□ -0.65
PRPF40A-211ENST00000493468 EME1Q96AY2 570 aa11□□□□□ -0.65
PRPF40A-211ENST00000493468 ADAT3Q96EY9 351 aaPredicted RBP11□□□□□ -0.65
PRPF40A-211ENST00000493468 KLK15Q9H2R5 256 aa11□□□□□ -0.65
PRPF40A-211ENST00000493468 FAM90A10PA6NDY2 464 aa10.99□□□□□ -0.65
PRPF40A-211ENST00000493468 HSPA12AO43301 675 aa10.99□□□□□ -0.65
PRPF40A-211ENST00000493468 MT-ND2P03891 347 aa10.99□□□□□ -0.65
PRPF40A-211ENST00000493468 REG1BP48304 166 aa10.99□□□□□ -0.65
PRPF40A-211ENST00000493468 GALEQ14376 348 aa10.99□□□□□ -0.65
PRPF40A-211ENST00000493468 NXNL2Q5VZ03 156 aa10.99□□□□□ -0.65
PRPF40A-211ENST00000493468 SSX6Q7RTT6 188 aa10.99□□□□□ -0.65
PRPF40A-211ENST00000493468 DHFR2Q86XF0 187 aa10.99□□□□□ -0.65
PRPF40A-211ENST00000493468 RTN4IP1Q8WWV3 396 aaPredicted RBP10.99□□□□□ -0.65
PRPF40A-211ENST00000493468 ELAC2Q9BQ52 826 aaKnown RBP10.99□□□□□ -0.65
PRPF40A-211ENST00000493468 BARHL1Q9BZE3 327 aa10.99□□□□□ -0.65
PRPF40A-211ENST00000493468 ZNF107Q9UII5 783 aaPredicted RBP10.99□□□□□ -0.65
PRPF40A-211ENST00000493468 MRPS28Q9Y2Q9 187 aaKnown RBP10.99□□□□□ -0.65
PRPF40A-211ENST00000493468 LINC01619G3V211 115 aa10.98□□□□□ -0.65
PRPF40A-211ENST00000493468 TXNL1O43396 289 aa10.98□□□□□ -0.65
PRPF40A-211ENST00000493468 PRKYO43930 277 aa10.98□□□□□ -0.65
PRPF40A-211ENST00000493468 SULT1C4O75897 302 aa10.98□□□□□ -0.65
PRPF40A-211ENST00000493468 SASH3O75995 380 aa10.98□□□□□ -0.65
PRPF40A-211ENST00000493468 APOL3O95236 402 aa10.98□□□□□ -0.65
PRPF40A-211ENST00000493468 ANXA8P13928 327 aa10.98□□□□□ -0.65
PRPF40A-211ENST00000493468 SSTR5P35346 364 aa10.98□□□□□ -0.65
PRPF40A-211ENST00000493468 KCNJ3P48549 501 aa10.98□□□□□ -0.65
PRPF40A-211ENST00000493468 RAB9AP51151 201 aa10.98□□□□□ -0.65
PRPF40A-211ENST00000493468 SLURP1P55000 103 aa10.98□□□□□ -0.65
PRPF40A-211ENST00000493468 LTC4SQ16873 150 aa10.98□□□□□ -0.65
PRPF40A-211ENST00000493468 RSBN1Q5VWQ0 802 aaPredicted RBP10.98□□□□□ -0.65
PRPF40A-211ENST00000493468 PRSS35Q8N3Z0 413 aa10.98□□□□□ -0.65
PRPF40A-211ENST00000493468 DNAJC9Q8WXX5 260 aa10.98□□□□□ -0.65
PRPF40A-211ENST00000493468 ARPC1AQ92747 370 aa10.98□□□□□ -0.65
PRPF40A-211ENST00000493468 RFT1Q96AA3 541 aa10.98□□□□□ -0.65
PRPF40A-211ENST00000493468 OR5B12Q96R08 314 aa10.98□□□□□ -0.65
PRPF40A-211ENST00000493468 PRRG3Q9BZD7 231 aa10.98□□□□□ -0.65
PRPF40A-211ENST00000493468 TAGLN3Q9UI15 199 aa10.98□□□□□ -0.65
PRPF40A-211ENST00000493468 A0A1W2PPE3 182 aa10.97□□□□□ -0.65
PRPF40A-211ENST00000493468 METTL15A6NJ78 407 aa10.97□□□□□ -0.65
PRPF40A-211ENST00000493468 H0YJX3 145 aa10.97□□□□□ -0.65
PRPF40A-211ENST00000493468 DBTP11182 482 aaKnown RBP10.97□□□□□ -0.65
PRPF40A-211ENST00000493468 IL3RAP26951 378 aa10.97□□□□□ -0.65
PRPF40A-211ENST00000493468 F2RL1P55085 397 aa10.97□□□□□ -0.65
PRPF40A-211ENST00000493468 PITPNAQ00169 270 aa10.97□□□□□ -0.65
PRPF40A-211ENST00000493468 HAGHQ16775 308 aa10.97□□□□□ -0.65
PRPF40A-211ENST00000493468 PAN3Q58A45 887 aaKnown RBP10.97□□□□□ -0.65
PRPF40A-211ENST00000493468 AADACL4Q5VUY2 407 aa10.97□□□□□ -0.65
PRPF40A-211ENST00000493468 FAM53AQ6NSI3 398 aaPredicted RBP10.97□□□□□ -0.65
PRPF40A-211ENST00000493468 ARHGAP24Q8N264 748 aa10.97□□□□□ -0.65
PRPF40A-211ENST00000493468 OR52M1Q8NGK5 317 aa10.97□□□□□ -0.65
PRPF40A-211ENST00000493468 RFESDQ8TAC1 157 aa10.97□□□□□ -0.65
PRPF40A-211ENST00000493468 MRGPRDQ8TDS7 321 aa10.97□□□□□ -0.65
PRPF40A-211ENST00000493468 MBOAT4Q96T53 435 aa10.97□□□□□ -0.65
PRPF40A-211ENST00000493468 TOLLIPQ9H0E2 274 aa10.97□□□□□ -0.65
PRPF40A-211ENST00000493468 TPSG1Q9NRR2 321 aa10.97□□□□□ -0.65
PRPF40A-211ENST00000493468 TRAV24A0A0B4J272 114 aa10.96□□□□□ -0.65
PRPF40A-211ENST00000493468 RBMY1BA6NDE4 496 aaKnown RBP10.96□□□□□ -0.65
PRPF40A-211ENST00000493468 RBMY1EA6NEQ0 496 aaKnown RBP10.96□□□□□ -0.65
PRPF40A-211ENST00000493468 HSPB6O14558 160 aa10.96□□□□□ -0.65
PRPF40A-211ENST00000493468 LGALS1P09382 135 aaKnown RBP10.96□□□□□ -0.65
PRPF40A-211ENST00000493468 RBMY1DP0C7P1 496 aaKnown RBP10.96□□□□□ -0.65
PRPF40A-211ENST00000493468 ZNF20P17024 532 aa10.96□□□□□ -0.65
PRPF40A-211ENST00000493468 ZNF137PP52743 207 aa10.96□□□□□ -0.65
PRPF40A-211ENST00000493468 CRISP1P54107 249 aa10.96□□□□□ -0.65
PRPF40A-211ENST00000493468 EFNB1P98172 346 aa10.96□□□□□ -0.65
PRPF40A-211ENST00000493468 TRIM25Q14258 630 aaKnown RBP10.96□□□□□ -0.65
PRPF40A-211ENST00000493468 Q3ZCU0 254 aa10.96□□□□□ -0.65
PRPF40A-211ENST00000493468 TMEM244Q5VVB8 128 aa10.96□□□□□ -0.65
PRPF40A-211ENST00000493468 ELP2Q6IA86 826 aa10.96□□□□□ -0.65
PRPF40A-211ENST00000493468 BCDIN3DQ7Z5W3 292 aaKnown RBP10.96□□□□□ -0.65
PRPF40A-211ENST00000493468 GID4Q8IVV7 300 aa10.96□□□□□ -0.65
PRPF40A-211ENST00000493468 HS3ST5Q8IZT8 346 aa10.96□□□□□ -0.65
PRPF40A-211ENST00000493468 MINDY2Q8NBR6 621 aa10.96□□□□□ -0.65
PRPF40A-211ENST00000493468 OR5D18Q8NGL1 313 aa10.96□□□□□ -0.65
PRPF40A-211ENST00000493468 CNIH3Q8TBE1 160 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms