RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 LIPFP07098 398 aa13□□□□□ -0.33
HPS4-216ENST00000493455 S100A5P33763 92 aa13□□□□□ -0.33
HPS4-216ENST00000493455 TALDO1P37837 337 aa13□□□□□ -0.33
HPS4-216ENST00000493455 MNDAP41218 407 aa13□□□□□ -0.33
HPS4-216ENST00000493455 DVL1P1P54792 670 aaPredicted RBP13□□□□□ -0.33
HPS4-216ENST00000493455 TAS2R20P59543 309 aa13□□□□□ -0.33
HPS4-216ENST00000493455 GNG2P59768 71 aa13□□□□□ -0.33
HPS4-216ENST00000493455 ARF6P62330 175 aa13□□□□□ -0.33
HPS4-216ENST00000493455 RNASE12Q5GAN4 147 aaKnown RBP13□□□□□ -0.33
HPS4-216ENST00000493455 TMEM200BQ69YZ2 307 aa13□□□□□ -0.33
HPS4-216ENST00000493455 SLC35E4Q6ICL7 350 aa13□□□□□ -0.33
HPS4-216ENST00000493455 CNIH2Q6PI25 160 aa13□□□□□ -0.33
HPS4-216ENST00000493455 OR13A1Q8NGR1 328 aa13□□□□□ -0.33
HPS4-216ENST00000493455 NUDCD2Q8WVJ2 157 aa13□□□□□ -0.33
HPS4-216ENST00000493455 GCDHQ92947 438 aaPredicted RBP13□□□□□ -0.33
HPS4-216ENST00000493455 DIRAS2Q96HU8 199 aa13□□□□□ -0.33
HPS4-216ENST00000493455 TMUB1Q9BVT8 246 aa13□□□□□ -0.33
HPS4-216ENST00000493455 YAE1D1Q9NRH1 226 aa13□□□□□ -0.33
HPS4-216ENST00000493455 HSF4Q9ULV5 492 aa13□□□□□ -0.33
HPS4-216ENST00000493455 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.99□□□□□ -0.333e-8■■■□□ 19
HPS4-216ENST00000493455 TRAV20A0A0B4J274 112 aa12.99□□□□□ -0.33
HPS4-216ENST00000493455 A0A0G2JMP0 313 aa12.99□□□□□ -0.33
HPS4-216ENST00000493455 A0A0X1KG70 313 aa12.99□□□□□ -0.33
HPS4-216ENST00000493455 GLAP06280 429 aa12.99□□□□□ -0.33
HPS4-216ENST00000493455 FCER2P06734 321 aa12.99□□□□□ -0.33
HPS4-216ENST00000493455 ERP29P30040 261 aaKnown RBP12.99□□□□□ -0.33
HPS4-216ENST00000493455 PRB3Q04118 309 aaPredicted RBP12.99□□□□□ -0.33
HPS4-216ENST00000493455 LTC4SQ16873 150 aa12.99□□□□□ -0.33
HPS4-216ENST00000493455 ZNF497Q6ZNH5 498 aa12.99□□□□□ -0.33
HPS4-216ENST00000493455 Q71RC1 249 aaPredicted RBP12.99□□□□□ -0.33
HPS4-216ENST00000493455 SNX29P2Q8IUI4 249 aa12.99□□□□□ -0.33
HPS4-216ENST00000493455 PRR18Q8N4B5 295 aa12.99□□□□□ -0.33
HPS4-216ENST00000493455 OR4M2Q8NGB6 313 aa12.99□□□□□ -0.33
HPS4-216ENST00000493455 MRPL30Q8TCC3 161 aaKnown RBP12.99□□□□□ -0.33
HPS4-216ENST00000493455 MAFIPQ8WZ33 124 aa12.99□□□□□ -0.33
HPS4-216ENST00000493455 C1orf159Q96HA4 380 aa12.99□□□□□ -0.33
HPS4-216ENST00000493455 CMTM3Q96MX0 182 aa12.99□□□□□ -0.33
HPS4-216ENST00000493455 PCGF1Q9BSM1 259 aa12.99□□□□□ -0.33
HPS4-216ENST00000493455 NXF2Q9GZY0 626 aaKnown RBP12.99□□□□□ -0.33
HPS4-216ENST00000493455 MMP27Q9H306 513 aa12.99□□□□□ -0.33
HPS4-216ENST00000493455 KCNK7Q9Y2U2 307 aa12.99□□□□□ -0.33
HPS4-216ENST00000493455 ABCA1O95477 2261 aa12.99□□□□□ -0.33
HPS4-216ENST00000493455 A0A1W2PPH5 198 aa12.98□□□□□ -0.33
HPS4-216ENST00000493455 MEIS3P1A6NDR6 274 aa12.98□□□□□ -0.33
HPS4-216ENST00000493455 XRCC3O43542 346 aa12.98□□□□□ -0.33
HPS4-216ENST00000493455 MT-ND4P03905 459 aa12.98□□□□□ -0.33
HPS4-216ENST00000493455 DLX1P56177 255 aa12.98□□□□□ -0.33
HPS4-216ENST00000493455 ERVFRD-1P60508 538 aa12.98□□□□□ -0.33
HPS4-216ENST00000493455 ARL6IP1Q15041 203 aa12.98□□□□□ -0.33
HPS4-216ENST00000493455 ZNF260Q3ZCT1 412 aa12.98□□□□□ -0.33
HPS4-216ENST00000493455 METTL11BQ5VVY1 283 aa12.98□□□□□ -0.33
HPS4-216ENST00000493455 TCF23Q7RTU1 214 aa12.98□□□□□ -0.33
HPS4-216ENST00000493455 ZNF714Q96N38 554 aa12.98□□□□□ -0.33
HPS4-216ENST00000493455 C12orf4Q9NQ89 552 aa12.98□□□□□ -0.33
HPS4-216ENST00000493455 SIRT7Q9NRC8 400 aa12.98□□□□□ -0.33
HPS4-216ENST00000493455 OR6C3Q9NZP0 311 aa12.98□□□□□ -0.33
HPS4-216ENST00000493455 LPAR3Q9UBY5 353 aa12.98□□□□□ -0.33
HPS4-216ENST00000493455 KCNS2Q9ULS6 477 aa12.98□□□□□ -0.33
HPS4-216ENST00000493455 INSIG2Q9Y5U4 225 aa12.98□□□□□ -0.33
HPS4-216ENST00000493455 LINC00312Q9Y6C7 94 aa12.98□□□□□ -0.33
HPS4-216ENST00000493455 A0A0A6YYH2 397 aa12.97□□□□□ -0.33
HPS4-216ENST00000493455 KIR2DS1A0A191URI9 304 aa12.97□□□□□ -0.33
HPS4-216ENST00000493455 A6NJ64 397 aa12.97□□□□□ -0.33
HPS4-216ENST00000493455 SERPINE3A8MV23 424 aa12.97□□□□□ -0.33
HPS4-216ENST00000493455 CD5LO43866 347 aa12.97□□□□□ -0.33
HPS4-216ENST00000493455 LY6G6DO95868 133 aa12.97□□□□□ -0.33
HPS4-216ENST00000493455 GSTP1P09211 210 aaKnown RBP12.97□□□□□ -0.33
HPS4-216ENST00000493455 RCC1P18754 421 aaPredicted RBP12.97□□□□□ -0.33
HPS4-216ENST00000493455 OMGP23515 440 aa12.97□□□□□ -0.33
HPS4-216ENST00000493455 TNFSF8P32971 234 aa12.97□□□□□ -0.33
HPS4-216ENST00000493455 SSTR5P35346 364 aa12.97□□□□□ -0.33
HPS4-216ENST00000493455 GUCA2AQ02747 115 aa12.97□□□□□ -0.33
HPS4-216ENST00000493455 PAX2Q02962 417 aa12.97□□□□□ -0.33
HPS4-216ENST00000493455 MEF2CQ06413 473 aaPredicted RBP12.97□□□□□ -0.33
HPS4-216ENST00000493455 KRTAP1-1Q07627 177 aa12.97□□□□□ -0.33
HPS4-216ENST00000493455 IL18Q14116 193 aa12.97□□□□□ -0.33
HPS4-216ENST00000493455 PRAMEF5Q5TYX0 476 aa12.97□□□□□ -0.33
HPS4-216ENST00000493455 CLEC9AQ6UXN8 241 aa12.97□□□□□ -0.33
HPS4-216ENST00000493455 ZNF782Q6ZMW2 699 aaPredicted RBP12.97□□□□□ -0.33
HPS4-216ENST00000493455 C5orf24Q7Z6I8 188 aa12.97□□□□□ -0.33
HPS4-216ENST00000493455 LY6G5BQ8NDX9 201 aa12.97□□□□□ -0.33
HPS4-216ENST00000493455 RFESDQ8TAC1 157 aa12.97□□□□□ -0.33
HPS4-216ENST00000493455 C8orf46Q8TAG6 207 aa12.97□□□□□ -0.33
HPS4-216ENST00000493455 GSX1Q9H4S2 264 aaPredicted RBP12.97□□□□□ -0.33
HPS4-216ENST00000493455 C7orf69Q9H7B7 122 aa12.97□□□□□ -0.33
HPS4-216ENST00000493455 AUNIPQ9H7T9 357 aa12.97□□□□□ -0.33
HPS4-216ENST00000493455 KCNIP1Q9NZI2 227 aa12.97□□□□□ -0.33
HPS4-216ENST00000493455 ZNF230Q9UIE0 474 aaPredicted RBP12.97□□□□□ -0.33
HPS4-216ENST00000493455 POLR3KQ9Y2Y1 108 aaPredicted RBP12.97□□□□□ -0.33
HPS4-216ENST00000493455 ACANP16112 2415 aa12.96□□□□□ -0.33
HPS4-216ENST00000493455 FAM172BPA6NC97 362 aa12.96□□□□□ -0.33
HPS4-216ENST00000493455 CA11O75493 328 aa12.96□□□□□ -0.33
HPS4-216ENST00000493455 CLPXO76031 633 aa12.96□□□□□ -0.33
HPS4-216ENST00000493455 TOX4O94842 621 aa12.96□□□□□ -0.33
HPS4-216ENST00000493455 ZNF728P0DKX0 622 aa12.96□□□□□ -0.33
HPS4-216ENST00000493455 HACD4Q5VWC8 232 aa12.96□□□□□ -0.33
HPS4-216ENST00000493455 FAM131AQ6UXB0 335 aa12.96□□□□□ -0.33
HPS4-216ENST00000493455 PDZD9Q8IXQ8 264 aa12.96□□□□□ -0.33
HPS4-216ENST00000493455 ZNF565Q8N9K5 539 aa12.96□□□□□ -0.33
HPS4-216ENST00000493455 ARL11Q969Q4 196 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms