RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 SHANK1Q9Y566 2161 aa11.86□□□□□ -0.51
PTPN7-216ENST00000492977 SPENQ96T58 3664 aaKnown RBP11.86□□□□□ -0.51
PTPN7-216ENST00000492977 LAMA5O15230 3695 aa11.85□□□□□ -0.51
PTPN7-216ENST00000492977 MAP1BP46821 2468 aaKnown RBP11.85□□□□□ -0.51
PTPN7-216ENST00000492977 C13orf42A0A1B0GVH6 325 aa11.85□□□□□ -0.51
PTPN7-216ENST00000492977 IFNL4K9M1U5 179 aa11.85□□□□□ -0.51
PTPN7-216ENST00000492977 BET1O15155 118 aa11.85□□□□□ -0.51
PTPN7-216ENST00000492977 ARPC5O15511 151 aa11.85□□□□□ -0.51
PTPN7-216ENST00000492977 TUSC2O75896 110 aa11.85□□□□□ -0.51
PTPN7-216ENST00000492977 HLA-DRB3P79483 266 aa11.85□□□□□ -0.51
PTPN7-216ENST00000492977 OPCMLQ14982 345 aa11.85□□□□□ -0.51
PTPN7-216ENST00000492977 HERPUD1Q15011 391 aa11.85□□□□□ -0.51
PTPN7-216ENST00000492977 SMIM21Q3B7S5 101 aa11.85□□□□□ -0.51
PTPN7-216ENST00000492977 ZNF546Q86UE3 836 aa11.85□□□□□ -0.51
PTPN7-216ENST00000492977 OR10Z1Q8NGY1 313 aa11.85□□□□□ -0.51
PTPN7-216ENST00000492977 RTN4IP1Q8WWV3 396 aaPredicted RBP11.85□□□□□ -0.51
PTPN7-216ENST00000492977 NAA60Q9H7X0 242 aa11.85□□□□□ -0.51
PTPN7-216ENST00000492977 METTL8Q9H825 291 aaKnown RBP11.85□□□□□ -0.51
PTPN7-216ENST00000492977 SLC2A9Q9NRM0 540 aa11.85□□□□□ -0.51
PTPN7-216ENST00000492977 UFSP2Q9NUQ7 469 aa11.85□□□□□ -0.51
PTPN7-216ENST00000492977 MEMO1Q9Y316 297 aa11.85□□□□□ -0.51
PTPN7-216ENST00000492977 DMXL2Q8TDJ6 3036 aa11.85□□□□□ -0.51
PTPN7-216ENST00000492977 IGKV1-6A0A0C4DH72 117 aa11.84□□□□□ -0.51
PTPN7-216ENST00000492977 hCG_1807616A0A1W2PRN6 198 aa11.84□□□□□ -0.51
PTPN7-216ENST00000492977 WNT9BO14905 357 aa11.84□□□□□ -0.51
PTPN7-216ENST00000492977 RCC1P18754 421 aaPredicted RBP11.84□□□□□ -0.51
PTPN7-216ENST00000492977 S100A11P31949 105 aa11.84□□□□□ -0.51
PTPN7-216ENST00000492977 VHLLQ6RSH7 139 aa11.84□□□□□ -0.51
PTPN7-216ENST00000492977 PCSK4Q6UW60 755 aa11.84□□□□□ -0.51
PTPN7-216ENST00000492977 TMUB2Q71RG4 321 aa11.84□□□□□ -0.51
PTPN7-216ENST00000492977 PLPPR1Q8TBJ4 325 aa11.84□□□□□ -0.51
PTPN7-216ENST00000492977 CABLES2Q9BTV7 478 aa11.84□□□□□ -0.51
PTPN7-216ENST00000492977 SUCNR1Q9BXA5 334 aa11.84□□□□□ -0.51
PTPN7-216ENST00000492977 MFFQ9GZY8 342 aa11.84□□□□□ -0.51
PTPN7-216ENST00000492977 SEBOXQ9HB31 216 aaPredicted RBP11.84□□□□□ -0.51
PTPN7-216ENST00000492977 TAAR3PQ9P1P4 343 aa11.84□□□□□ -0.51
PTPN7-216ENST00000492977 OR14J1Q9UGF5 321 aa11.84□□□□□ -0.51
PTPN7-216ENST00000492977 WIPI2Q9Y4P8 454 aa11.84□□□□□ -0.51
PTPN7-216ENST00000492977 TRBV6-7A0A0A0MS04 114 aa11.84□□□□□ -0.51
PTPN7-216ENST00000492977 ZSCAN5BA6NJL1 495 aa11.84□□□□□ -0.51
PTPN7-216ENST00000492977 NPIPB11E5RHQ5 1161 aa11.84□□□□□ -0.51
PTPN7-216ENST00000492977 ADAP1O75689 374 aa11.84□□□□□ -0.51
PTPN7-216ENST00000492977 PSMB6P28072 239 aa11.84□□□□□ -0.51
PTPN7-216ENST00000492977 KCNJ3P48549 501 aa11.84□□□□□ -0.51
PTPN7-216ENST00000492977 RND3P61587 244 aa11.84□□□□□ -0.51
PTPN7-216ENST00000492977 FAM90A1Q86YD7 464 aa11.84□□□□□ -0.51
PTPN7-216ENST00000492977 RP1L1Q8IWN7 2480 aaPredicted RBP11.84□□□□□ -0.51
PTPN7-216ENST00000492977 ZNF565Q8N9K5 539 aa11.84□□□□□ -0.51
PTPN7-216ENST00000492977 ST6GALNAC3Q8NDV1 305 aa11.84□□□□□ -0.51
PTPN7-216ENST00000492977 ZNF680Q8NEM1 530 aa11.84□□□□□ -0.51
PTPN7-216ENST00000492977 OR10J5Q8NHC4 309 aa11.84□□□□□ -0.51
PTPN7-216ENST00000492977 THAP6Q8TBB0 222 aa11.84□□□□□ -0.51
PTPN7-216ENST00000492977 MRPL24Q96A35 216 aaKnown RBP11.84□□□□□ -0.51
PTPN7-216ENST00000492977 C2orf50Q96LR7 162 aa11.84□□□□□ -0.51
PTPN7-216ENST00000492977 MBNL3Q9NUK0 354 aaKnown RBP11.84□□□□□ -0.51
PTPN7-216ENST00000492977 PRR13Q9NZ81 148 aa11.84□□□□□ -0.51
PTPN7-216ENST00000492977 TRAPPC2LQ9UL33 140 aa11.84□□□□□ -0.51
PTPN7-216ENST00000492977 BOD1L1Q8NFC6 3051 aa11.83□□□□□ -0.52
PTPN7-216ENST00000492977 TRGV8A0A0C4DH27 118 aa11.83□□□□□ -0.52
PTPN7-216ENST00000492977 A0A0D9SG52 128 aa11.83□□□□□ -0.52
PTPN7-216ENST00000492977 SRRM5B3KS81 715 aa11.83□□□□□ -0.52
PTPN7-216ENST00000492977 MPC2O95563 127 aa11.83□□□□□ -0.52
PTPN7-216ENST00000492977 IFNA7P01567 189 aa11.83□□□□□ -0.52
PTPN7-216ENST00000492977 THBDP07204 575 aa11.83□□□□□ -0.52
PTPN7-216ENST00000492977 C1QTNF9P0C862 333 aa11.83□□□□□ -0.52
PTPN7-216ENST00000492977 GNRHRP30968 328 aa11.83□□□□□ -0.52
PTPN7-216ENST00000492977 CA7P43166 264 aa11.83□□□□□ -0.52
PTPN7-216ENST00000492977 ID4P47928 161 aa11.83□□□□□ -0.52
PTPN7-216ENST00000492977 TMEM187Q14656 261 aa11.83□□□□□ -0.52
PTPN7-216ENST00000492977 PHLDA2Q53GA4 152 aa11.83□□□□□ -0.52
PTPN7-216ENST00000492977 SLC35E4Q6ICL7 350 aa11.83□□□□□ -0.52
PTPN7-216ENST00000492977 WFDC8Q8IUA0 241 aa11.83□□□□□ -0.52
PTPN7-216ENST00000492977 SLC7A5P1Q8MH63 180 aa11.83□□□□□ -0.52
PTPN7-216ENST00000492977 LRTM2Q8N967 370 aa11.83□□□□□ -0.52
PTPN7-216ENST00000492977 LRRC29Q8WV35 223 aa11.83□□□□□ -0.52
PTPN7-216ENST00000492977 MEGF10Q96KG7 1140 aa11.83□□□□□ -0.52
PTPN7-216ENST00000492977 MRPL37Q9BZE1 423 aaKnown RBP11.83□□□□□ -0.52
PTPN7-216ENST00000492977 TNFSF18Q9UNG2 199 aa11.83□□□□□ -0.52
PTPN7-216ENST00000492977 CADP27708 2225 aa11.82□□□□□ -0.52
PTPN7-216ENST00000492977 TMEM30CPA0ZSE6 113 aa11.82□□□□□ -0.52
PTPN7-216ENST00000492977 DPRXA6NFQ7 191 aa11.82□□□□□ -0.52
PTPN7-216ENST00000492977 GPR31O00270 319 aa11.82□□□□□ -0.52
PTPN7-216ENST00000492977 MPPED1O15442 326 aa11.82□□□□□ -0.52
PTPN7-216ENST00000492977 PSPNO60542 156 aa11.82□□□□□ -0.52
PTPN7-216ENST00000492977 OR2F2O95006 317 aa11.82□□□□□ -0.52
PTPN7-216ENST00000492977 IFNA21P01568 189 aa11.82□□□□□ -0.52
PTPN7-216ENST00000492977 OR5AC1P0C628 307 aa11.82□□□□□ -0.52
PTPN7-216ENST00000492977 SFTPCP11686 197 aa11.82□□□□□ -0.52
PTPN7-216ENST00000492977 GATA4P43694 442 aa11.82□□□□□ -0.52
PTPN7-216ENST00000492977 OR2F1Q13607 317 aa11.82□□□□□ -0.52
PTPN7-216ENST00000492977 ZNF345Q14585 488 aa11.82□□□□□ -0.52
PTPN7-216ENST00000492977 ATXN7L3Q14CW9 347 aaPredicted RBP11.82□□□□□ -0.52
PTPN7-216ENST00000492977 LRRC37A5PQ49AS3 106 aa11.82□□□□□ -0.52
PTPN7-216ENST00000492977 C5orf24Q7Z6I8 188 aa11.82□□□□□ -0.52
PTPN7-216ENST00000492977 LDLRAD3Q86YD5 345 aa11.82□□□□□ -0.52
PTPN7-216ENST00000492977 H1FOOQ8IZA3 346 aaPredicted RBP11.82□□□□□ -0.52
PTPN7-216ENST00000492977 LILRB1Q8NHL6 650 aaPredicted RBP11.82□□□□□ -0.52
PTPN7-216ENST00000492977 KIRREL1Q96J84 757 aa11.82□□□□□ -0.52
PTPN7-216ENST00000492977 OR2V2Q96R30 315 aa11.82□□□□□ -0.52
PTPN7-216ENST00000492977 SLC5A7Q9GZV3 580 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms