RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 PATZ1Q9HBE1 687 aaKnown RBP18.04■□□□□ 0.48
VCPKMT-204ENST00000491402 MTFP1Q9UDX5 166 aa18.04■□□□□ 0.48
VCPKMT-204ENST00000491402 ZNF230Q9UIE0 474 aaPredicted RBP18.04■□□□□ 0.48
VCPKMT-204ENST00000491402 MALRD1Q5VYJ5 2156 aa18.04■□□□□ 0.48
VCPKMT-204ENST00000491402 TMEM30CPA0ZSE6 113 aa18.04■□□□□ 0.48
VCPKMT-204ENST00000491402 LANCL1O43813 399 aa18.04■□□□□ 0.48
VCPKMT-204ENST00000491402 NDUFB7P17568 137 aa18.04■□□□□ 0.48
VCPKMT-204ENST00000491402 DTYMKP23919 212 aa18.04■□□□□ 0.48
VCPKMT-204ENST00000491402 GLIPR1P48060 266 aa18.04■□□□□ 0.48
VCPKMT-204ENST00000491402 EDDM3BP56851 147 aa18.04■□□□□ 0.48
VCPKMT-204ENST00000491402 ZNF841Q6ZN19 808 aa18.04■□□□□ 0.48
VCPKMT-204ENST00000491402 GVQW1Q8N7I0 195 aa18.04■□□□□ 0.48
VCPKMT-204ENST00000491402 OR4K15Q8NH41 348 aa18.04■□□□□ 0.48
VCPKMT-204ENST00000491402 OCSTAMPQ9BR26 566 aa18.04■□□□□ 0.48
VCPKMT-204ENST00000491402 KIF25Q9UIL4 384 aa18.04■□□□□ 0.48
VCPKMT-204ENST00000491402 RBMX2Q9Y388 322 aaKnown RBP18.04■□□□□ 0.48
VCPKMT-204ENST00000491402 F5H0A9 414 aaPredicted RBP18.03■□□□□ 0.48
VCPKMT-204ENST00000491402 H7C1Q1 480 aa18.03■□□□□ 0.48
VCPKMT-204ENST00000491402 MT-ND4P03905 459 aa18.03■□□□□ 0.48
VCPKMT-204ENST00000491402 FCER2P06734 321 aa18.03■□□□□ 0.48
VCPKMT-204ENST00000491402 IL7P13232 177 aa18.03■□□□□ 0.48
VCPKMT-204ENST00000491402 ERP29P30040 261 aaKnown RBP18.03■□□□□ 0.48
VCPKMT-204ENST00000491402 CBX5P45973 191 aa18.03■□□□□ 0.48
VCPKMT-204ENST00000491402 P2RX3P56373 397 aa18.03■□□□□ 0.48
VCPKMT-204ENST00000491402 Q96MF0 132 aa18.03■□□□□ 0.48
VCPKMT-204ENST00000491402 IFT46Q9NQC8 304 aa18.03■□□□□ 0.48
VCPKMT-204ENST00000491402 TRBV6-6A0A0A6YYG2 114 aa18.02■□□□□ 0.48
VCPKMT-204ENST00000491402 ORC5O43913 435 aa18.02■□□□□ 0.48
VCPKMT-204ENST00000491402 RBBP9O75884 186 aa18.02■□□□□ 0.48
VCPKMT-204ENST00000491402 GDNFP39905 211 aa18.02■□□□□ 0.48
VCPKMT-204ENST00000491402 SEC61A1P61619 476 aaKnown RBP18.02■□□□□ 0.48
VCPKMT-204ENST00000491402 MAFIPQ8WZ33 124 aa18.02■□□□□ 0.48
VCPKMT-204ENST00000491402 MEIKINA0A087WXM9 373 aa18.02■□□□□ 0.47
VCPKMT-204ENST00000491402 IGHV2-5P01817 119 aa18.02■□□□□ 0.47
VCPKMT-204ENST00000491402 ACTBP60709 375 aa18.02■□□□□ 0.47
VCPKMT-204ENST00000491402 ACTG1P63261 375 aa18.02■□□□□ 0.47
VCPKMT-204ENST00000491402 SSBP1Q04837 148 aaKnown RBP18.02■□□□□ 0.47
VCPKMT-204ENST00000491402 TRIQKQ629K1 86 aa18.02■□□□□ 0.47
VCPKMT-204ENST00000491402 CLDND2Q8NHS1 167 aa18.02■□□□□ 0.47
VCPKMT-204ENST00000491402 SETD6Q8TBK2 473 aa18.02■□□□□ 0.47
VCPKMT-204ENST00000491402 ST6GALNAC5Q9BVH7 336 aa18.02■□□□□ 0.47
VCPKMT-204ENST00000491402 CLN8Q9UBY8 286 aa18.02■□□□□ 0.47
VCPKMT-204ENST00000491402 TRAPPC2LQ9UL33 140 aa18.02■□□□□ 0.47
VCPKMT-204ENST00000491402 ANAPC10Q9UM13 185 aa18.02■□□□□ 0.47
VCPKMT-204ENST00000491402 ODAMA1E959 279 aa18.01■□□□□ 0.47
VCPKMT-204ENST00000491402 FUOMA2VDF0 154 aa18.01■□□□□ 0.47
VCPKMT-204ENST00000491402 CCDC107Q8WV48 283 aa18.01■□□□□ 0.47
VCPKMT-204ENST00000491402 BORCS5Q969J3 196 aa18.01■□□□□ 0.47
VCPKMT-204ENST00000491402 IGHV4-61A0A0C4DH41 118 aa18■□□□□ 0.47
VCPKMT-204ENST00000491402 UPK1BO75841 260 aa18■□□□□ 0.47
VCPKMT-204ENST00000491402 RCC1P18754 421 aaPredicted RBP18■□□□□ 0.47
VCPKMT-204ENST00000491402 RCVRNP35243 200 aa18■□□□□ 0.47
VCPKMT-204ENST00000491402 NPY4RP50391 375 aa18■□□□□ 0.47
VCPKMT-204ENST00000491402 WDR25Q64LD2 544 aaPredicted RBP18■□□□□ 0.47
VCPKMT-204ENST00000491402 ZNF880Q6PDB4 577 aa18■□□□□ 0.47
VCPKMT-204ENST00000491402 HOGA1Q86XE5 327 aa18■□□□□ 0.47
VCPKMT-204ENST00000491402 SNAPC3Q92966 411 aa18■□□□□ 0.47
VCPKMT-204ENST00000491402 Q9N2K0 584 aa18■□□□□ 0.47
VCPKMT-204ENST00000491402 ABCB10Q9NRK6 738 aa18■□□□□ 0.47
VCPKMT-204ENST00000491402 MBNL3Q9NUK0 354 aaKnown RBP18■□□□□ 0.47
VCPKMT-204ENST00000491402 FLNAP21333 2647 aaKnown RBP18■□□□□ 0.47
VCPKMT-204ENST00000491402 CELSR1Q9NYQ6 3014 aa18■□□□□ 0.47
VCPKMT-204ENST00000491402 TRAV39A0A0B4J263 110 aa17.99■□□□□ 0.47
VCPKMT-204ENST00000491402 POM121CA8CG34 1229 aa17.99■□□□□ 0.47
VCPKMT-204ENST00000491402 GPR37O15354 613 aa17.99■□□□□ 0.47
VCPKMT-204ENST00000491402 SLC25A16P16260 332 aa17.99■□□□□ 0.47
VCPKMT-204ENST00000491402 LMO4P61968 165 aa17.99■□□□□ 0.47
VCPKMT-204ENST00000491402 OR52W1Q6IF63 320 aa17.99■□□□□ 0.47
VCPKMT-204ENST00000491402 MOB1BQ7L9L4 216 aa17.99■□□□□ 0.47
VCPKMT-204ENST00000491402 BEST4Q8NFU0 473 aa17.99■□□□□ 0.47
VCPKMT-204ENST00000491402 H1FXQ92522 213 aaKnown RBP17.99■□□□□ 0.47
VCPKMT-204ENST00000491402 SSBP3Q9BWW4 388 aaPredicted RBP17.99■□□□□ 0.47
VCPKMT-204ENST00000491402 NCOR1P1Q9H4R4 102 aa17.99■□□□□ 0.47
VCPKMT-204ENST00000491402 A0A1W2PQ09 198 aa17.99■□□□□ 0.47
VCPKMT-204ENST00000491402 MEX3AA1L020 520 aaKnown RBP17.99■□□□□ 0.47
VCPKMT-204ENST00000491402 GNB2P62879 340 aa17.99■□□□□ 0.47
VCPKMT-204ENST00000491402 RPL31P62899 125 aaKnown RBP17.99■□□□□ 0.47
VCPKMT-204ENST00000491402 SRSF7Q16629 238 aaKnown RBP eCLIP17.99■□□□□ 0.47
VCPKMT-204ENST00000491402 ESCO2Q56NI9 601 aa17.99■□□□□ 0.47
VCPKMT-204ENST00000491402 RAB39BQ96DA2 213 aa17.99■□□□□ 0.47
VCPKMT-204ENST00000491402 DCTN5Q9BTE1 182 aa17.99■□□□□ 0.47
VCPKMT-204ENST00000491402 C19orf12Q9NSK7 152 aa17.99■□□□□ 0.47
VCPKMT-204ENST00000491402 MED13LQ71F56 2210 aa17.98■□□□□ 0.47
VCPKMT-204ENST00000491402 IGKV1D-8A0A087WSZ0 117 aa17.98■□□□□ 0.47
VCPKMT-204ENST00000491402 PHF1O43189 567 aaPredicted RBP17.98■□□□□ 0.47
VCPKMT-204ENST00000491402 NAT1P18440 290 aa17.98■□□□□ 0.47
VCPKMT-204ENST00000491402 GLP1RP43220 463 aa17.98■□□□□ 0.47
VCPKMT-204ENST00000491402 IFITM3Q01628 133 aa17.98■□□□□ 0.47
VCPKMT-204ENST00000491402 C16orf87Q6PH81 154 aa17.98■□□□□ 0.47
VCPKMT-204ENST00000491402 TCF23Q7RTU1 214 aa17.98■□□□□ 0.47
VCPKMT-204ENST00000491402 OR13A1Q8NGR1 328 aa17.98■□□□□ 0.47
VCPKMT-204ENST00000491402 ZNF286AQ9HBT8 521 aa17.98■□□□□ 0.47
VCPKMT-204ENST00000491402 TAS2R8Q9NYW2 309 aa17.98■□□□□ 0.47
VCPKMT-204ENST00000491402 OR6C3Q9NZP0 311 aa17.98■□□□□ 0.47
VCPKMT-204ENST00000491402 CSF1P09603 554 aa17.97■□□□□ 0.47
VCPKMT-204ENST00000491402 INPP1P49441 399 aa17.97■□□□□ 0.47
VCPKMT-204ENST00000491402 STEAP3Q658P3 488 aa17.97■□□□□ 0.47
VCPKMT-204ENST00000491402 Q6ZS49 121 aa17.97■□□□□ 0.47
VCPKMT-204ENST00000491402 BTN2A1Q7KYR7 527 aa17.97■□□□□ 0.47
VCPKMT-204ENST00000491402 TOMM5Q8N4H5 51 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms