RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 FOXI3A8MTJ6 420 aaPredicted RBP1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 FAM90A22PA8MWA6 464 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 FAM90A12PA8MX19 464 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 FAM90A23PA8MXZ1 464 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF732B4DXR9 585 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 SEC14L6B5MCN3 397 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF878C9JN71 531 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 LMO7DNF2Z398 122 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 GPR31O00270 319 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 SDCBPO00560 298 aaPredicted RBP1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 CCSO14618 274 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 TP53I11O14683 189 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 SCAMP1O15126 338 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 EFNA2O43921 213 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 LRP3O75074 770 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 ICOSLGO75144 302 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 MED6O75586 246 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 DEDDO75618 318 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 ADAP1O75689 374 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 CRTAPO75718 401 aaPredicted RBP1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 EIF3GO75821 320 aaKnown RBP eCLIP1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 CBR3O75828 277 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 OR2C1O95371 312 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 CDS2O95674 445 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 IGLV3-1P01715 115 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 IGHG1P01857 330 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 HBE1P02100 147 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 PRH1P02810 166 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 SERPINA5P05154 406 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 CSN2P05814 226 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 IGHV4-34P06331 123 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 FABP1P07148 127 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 UMODP07911 640 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 HCKP08631 526 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 QDPRP09417 244 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF806P0C7X5 589 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 SMIM6P0DI80 62 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF728P0DKX0 622 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 OR5H8P0DN80 308 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 SLC25A6P12236 298 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 CEACAM1P13688 526 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 HLA-DOBP13765 273 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 RPS2P15880 293 aaKnown RBP1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 MUC1P15941 1255 aaPredicted RBP1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF14P17017 642 aaPredicted RBP1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF708P17019 499 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 GABRG2P18507 467 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 RAB5AP20339 215 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 FUT3P21217 361 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 BCKDHBP21953 392 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 DTYMKP23919 212 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 ACKR3P25106 362 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 CD27P26842 260 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 S100A2P29034 98 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 S100GP29377 79 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 CD80P33681 288 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 TAGLN2P37802 199 aaKnown RBP1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 RPS27P42677 84 aaKnown RBP1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 NPBWR1P48145 328 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 CAMLGP49069 296 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 RBP2P50120 134 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 NPY4RP50391 375 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 FUT6P51993 359 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 AKR1C2P52895 323 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 BIDP55957 195 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 FBXW4P57775 412 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 SSTP61278 116 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 PCBD1P61457 104 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 ERVK11-1P61568 191 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 SUPT4H1P63272 117 aaKnown RBP1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 SRPXP78539 464 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 SERF2P84101 59 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 ACY1Q03154 408 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 TLE4Q04727 773 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 AKR1C1Q04828 323 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 MFGE8Q08431 387 aaPredicted RBP1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 FABP9Q0Z7S8 132 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 FOXO1Q12778 655 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 IL24Q13007 206 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 MFAP5Q13361 173 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 UNC119Q13432 240 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 C1orf61Q13536 156 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 TMEM187Q14656 261 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 EBPQ15125 230 aaKnown RBP1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 SLC9A3R2Q15599 337 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 OR7A5Q15622 319 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 UBE2V2Q15819 145 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 ATP6V1FQ16864 119 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 MRGPRG-AS1Q2M3A8 158 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 RSPO1Q2MKA7 263 aaPredicted RBP1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 IAH1Q2TAA2 248 aaPredicted RBP1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 HFEQ30201 348 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 ANKRD55Q3KP44 614 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 TMEM176BQ3YBM2 270 aaPredicted RBP1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 ACSF3Q4G176 576 aaPredicted RBP1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 SLC22A6Q4U2R8 563 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 C14orf28Q4W4Y0 310 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 ABCA11PQ4W5N1 156 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 KHDC3LQ587J8 217 aa1.74□□□□□ -2.13
SNRNP40-207ENST00000491106 FAM74A1Q5RGS3 127 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms