RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 OR8U8P0C7N1 319 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 GZMHP20718 246 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 SOHLH1Q5JUK2 328 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 PRAMEF5Q5TYX0 476 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 PRAMEF6Q5VXH4 476 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 CXorf67Q86X51 503 aaPredicted RBP6.32□□□□□ -1.4
NPHP3-208ENST00000490993 BVESQ8NE79 360 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 C22orf15Q8WYQ4 148 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 DYRK2Q92630 601 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 AQP10Q96PS8 301 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 ZNF552Q9H707 407 aaPredicted RBP6.32□□□□□ -1.4
NPHP3-208ENST00000490993 APOA2P02652 100 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 MBPP02686 304 aaPredicted RBP6.32□□□□□ -1.4
NPHP3-208ENST00000490993 GAPDHP04406 335 aaKnown RBP6.32□□□□□ -1.4
NPHP3-208ENST00000490993 CD37P11049 281 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 PDLIM3Q53GG5 364 aaPredicted RBP6.32□□□□□ -1.4
NPHP3-208ENST00000490993 DHRS11Q6UWP2 260 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 SLC35G3Q8N808 338 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 OR10P1Q8NGE3 313 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 IL22RA2Q969J5 263 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 SPSB4Q96A44 273 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 PINX1Q96BK5 328 aaKnown RBP6.32□□□□□ -1.4
NPHP3-208ENST00000490993 POM121L2Q96KW2 1035 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 OR5B12Q96R08 314 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 MAGT1Q9H0U3 335 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 CCL28Q9NRJ3 127 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 SMCO4Q9NRQ5 59 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 H0Y980 276 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 DEDDO75618 318 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 IFNA4P05014 189 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 ADH4P08319 380 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 ZNF14P17017 642 aaPredicted RBP6.32□□□□□ -1.4
NPHP3-208ENST00000490993 TNFAIP6P98066 277 aaPredicted RBP6.32□□□□□ -1.4
NPHP3-208ENST00000490993 RTL8BQ17RB0 113 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 ANKRD55Q3KP44 614 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 NHLRC3Q5JS37 347 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 SCCPDHQ8NBX0 429 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 MS4A3Q96HJ5 214 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 TMEM222Q9H0R3 208 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 HEYLQ9NQ87 328 aaPredicted RBP6.32□□□□□ -1.4
NPHP3-208ENST00000490993 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.32□□□□□ -1.4
NPHP3-208ENST00000490993 C19orf12Q9NSK7 152 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 SCGB2A1O75556 95 aa6.31□□□□□ -1.4
NPHP3-208ENST00000490993 NXPH3O95157 252 aa6.31□□□□□ -1.4
NPHP3-208ENST00000490993 NDUFB7P17568 137 aa6.31□□□□□ -1.4
NPHP3-208ENST00000490993 LPAR6P43657 344 aa6.31□□□□□ -1.4
NPHP3-208ENST00000490993 OR3A1P47881 315 aa6.31□□□□□ -1.4
NPHP3-208ENST00000490993 UCNP55089 124 aa6.31□□□□□ -1.4
NPHP3-208ENST00000490993 ZNF660Q6AZW8 331 aaPredicted RBP6.31□□□□□ -1.4
NPHP3-208ENST00000490993 DNM1P46Q6ZS02 220 aa6.31□□□□□ -1.4
NPHP3-208ENST00000490993 TCTEX1D1Q8N7M0 179 aa6.31□□□□□ -1.4
NPHP3-208ENST00000490993 SFXN3Q9BWM7 321 aa6.31□□□□□ -1.4
NPHP3-208ENST00000490993 PRR13Q9NZ81 148 aa6.31□□□□□ -1.4
NPHP3-208ENST00000490993 SYNGR1O43759 233 aa6.31□□□□□ -1.4
NPHP3-208ENST00000490993 WISP1O95388 367 aa6.31□□□□□ -1.4
NPHP3-208ENST00000490993 MMP7P09237 267 aaPredicted RBP6.31□□□□□ -1.4
NPHP3-208ENST00000490993 BMP5P22003 454 aa6.31□□□□□ -1.4
NPHP3-208ENST00000490993 TAGLN2P37802 199 aaKnown RBP6.31□□□□□ -1.4
NPHP3-208ENST00000490993 SRSF7Q16629 238 aaKnown RBP eCLIP6.31□□□□□ -1.4
NPHP3-208ENST00000490993 SPANXN5Q5MJ07 72 aa6.31□□□□□ -1.4
NPHP3-208ENST00000490993 PXDC1Q5TGL8 231 aa6.31□□□□□ -1.4
NPHP3-208ENST00000490993 LYZL2Q7Z4W2 148 aa6.31□□□□□ -1.4
NPHP3-208ENST00000490993 FAM219AQ8IW50 185 aa6.31□□□□□ -1.4
NPHP3-208ENST00000490993 NANPQ8TBE9 248 aa6.31□□□□□ -1.4
NPHP3-208ENST00000490993 GTF3AQ92664 365 aaKnown RBP6.31□□□□□ -1.4
NPHP3-208ENST00000490993 CYB5BO43169 146 aa6.31□□□□□ -1.4
NPHP3-208ENST00000490993 NFYBP25208 207 aa6.31□□□□□ -1.4
NPHP3-208ENST00000490993 Q5BKY6 102 aa6.31□□□□□ -1.4
NPHP3-208ENST00000490993 C1QTNF12Q5T7M4 302 aa6.31□□□□□ -1.4
NPHP3-208ENST00000490993 RPL7L1Q6DKI1 246 aaKnown RBP6.31□□□□□ -1.4
NPHP3-208ENST00000490993 DIRC2Q96SL1 478 aa6.31□□□□□ -1.4
NPHP3-208ENST00000490993 DLL3Q9NYJ7 618 aa6.31□□□□□ -1.4
NPHP3-208ENST00000490993 OR2H2O95918 312 aa6.31□□□□□ -1.4
NPHP3-208ENST00000490993 SNRNP70P08621 437 aaKnown RBP6.31□□□□□ -1.4
NPHP3-208ENST00000490993 DVL1P1P54792 670 aaPredicted RBP6.31□□□□□ -1.4
NPHP3-208ENST00000490993 ATP6V1FQ16864 119 aa6.31□□□□□ -1.4
NPHP3-208ENST00000490993 TMEM42Q69YG0 159 aa6.31□□□□□ -1.4
NPHP3-208ENST00000490993 POC1AQ8NBT0 407 aa6.31□□□□□ -1.4
NPHP3-208ENST00000490993 SFT2D1Q8WV19 159 aa6.31□□□□□ -1.4
NPHP3-208ENST00000490993 SLC39A7Q92504 469 aa6.31□□□□□ -1.4
NPHP3-208ENST00000490993 CORO2AQ92828 525 aa6.31□□□□□ -1.4
NPHP3-208ENST00000490993 GALNT14Q96FL9 552 aa6.31□□□□□ -1.4
NPHP3-208ENST00000490993 CXorf58Q96LI9 332 aa6.31□□□□□ -1.4
NPHP3-208ENST00000490993 OR2D2Q9H210 308 aa6.31□□□□□ -1.4
NPHP3-208ENST00000490993 ESRP2Q9H6T0 727 aaKnown RBP6.31□□□□□ -1.4
NPHP3-208ENST00000490993 FZR1Q9UM11 496 aa6.31□□□□□ -1.4
NPHP3-208ENST00000490993 A0A0A6YYD4 124 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 CLEC18AA5D8T8 446 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 RNASEK-C17orf49H0YIS7 233 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 ST8SIA5O15466 376 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 SMPD2O60906 423 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 NMBP08949 121 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 SEC11BP0C7V7 166 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 IGSF11Q5DX21 431 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 OR8G2PQ6IF36 304 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 GLRX5Q86SX6 157 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 CLEC18CQ8NCF0 446 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 ERGIC1Q969X5 290 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 RTBDNQ9BSG5 229 aaPredicted RBP6.3□□□□□ -1.4
NPHP3-208ENST00000490993 OPN3Q9H1Y3 402 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms