RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 H0YJX3 145 aa10.88□□□□□ -0.67
VARS-227ENST00000489979 RRP9O43818 475 aaKnown RBP10.88□□□□□ -0.67
VARS-227ENST00000489979 MPZL2O60487 215 aa10.88□□□□□ -0.67
VARS-227ENST00000489979 IGHG4P01861 327 aa10.88□□□□□ -0.67
VARS-227ENST00000489979 FRMD6-AS1P0C7T7 363 aa10.88□□□□□ -0.67
VARS-227ENST00000489979 VDAC1P21796 283 aa10.88□□□□□ -0.67
VARS-227ENST00000489979 EPHA2P29317 976 aa10.88□□□□□ -0.67
VARS-227ENST00000489979 HTR1FP30939 366 aa10.88□□□□□ -0.67
VARS-227ENST00000489979 FAM27D1Q5T7N8 215 aa10.88□□□□□ -0.67
VARS-227ENST00000489979 TMEM244Q5VVB8 128 aa10.88□□□□□ -0.67
VARS-227ENST00000489979 FAHD1Q6P587 224 aa10.88□□□□□ -0.67
VARS-227ENST00000489979 IZUMO1Q8IYV9 350 aa10.88□□□□□ -0.67
VARS-227ENST00000489979 OR2T10Q8NGZ9 312 aa10.88□□□□□ -0.67
VARS-227ENST00000489979 MRGPRDQ8TDS7 321 aa10.88□□□□□ -0.67
VARS-227ENST00000489979 RNF166Q96A37 237 aaPredicted RBP10.88□□□□□ -0.67
VARS-227ENST00000489979 RNFT2Q96EX2 444 aa10.88□□□□□ -0.67
VARS-227ENST00000489979 PLSCR3Q9NRY6 295 aa10.88□□□□□ -0.67
VARS-227ENST00000489979 WARS2Q9UGM6 360 aaKnown RBP10.88□□□□□ -0.67
VARS-227ENST00000489979 GNG8Q9UK08 70 aa10.88□□□□□ -0.67
VARS-227ENST00000489979 MITFO75030 526 aaPredicted RBP10.87□□□□□ -0.67
VARS-227ENST00000489979 FKBP6O75344 327 aa10.87□□□□□ -0.67
VARS-227ENST00000489979 FAM107AO95990 144 aa10.87□□□□□ -0.67
VARS-227ENST00000489979 GAPDHP04406 335 aaKnown RBP10.87□□□□□ -0.67
VARS-227ENST00000489979 PSMB8P28062 276 aa10.87□□□□□ -0.67
VARS-227ENST00000489979 SSTR5P35346 364 aa10.87□□□□□ -0.67
VARS-227ENST00000489979 TP53I3Q53FA7 332 aa10.87□□□□□ -0.67
VARS-227ENST00000489979 PAN3Q58A45 887 aaKnown RBP10.87□□□□□ -0.67
VARS-227ENST00000489979 ASPHD1Q5U4P2 390 aa10.87□□□□□ -0.67
VARS-227ENST00000489979 C12orf73Q69YU5 71 aa10.87□□□□□ -0.67
VARS-227ENST00000489979 SLC16A12Q6ZSM3 486 aa10.87□□□□□ -0.67
VARS-227ENST00000489979 FAM220AQ7Z4H9 259 aa10.87□□□□□ -0.67
VARS-227ENST00000489979 SAXO1Q8IYX7 474 aa10.87□□□□□ -0.67
VARS-227ENST00000489979 OR1N2Q8NGR9 330 aa10.87□□□□□ -0.67
VARS-227ENST00000489979 OR13C9Q8NGT0 318 aa10.87□□□□□ -0.67
VARS-227ENST00000489979 OR2G2Q8NGZ5 317 aa10.87□□□□□ -0.67
VARS-227ENST00000489979 NRBF2Q96F24 287 aa10.87□□□□□ -0.67
VARS-227ENST00000489979 KCTD7Q96MP8 289 aa10.87□□□□□ -0.67
VARS-227ENST00000489979 NR1H4Q96RI1 486 aaPredicted RBP10.87□□□□□ -0.67
VARS-227ENST00000489979 MBOAT4Q96T53 435 aa10.87□□□□□ -0.67
VARS-227ENST00000489979 S1PR3Q99500 378 aa10.87□□□□□ -0.67
VARS-227ENST00000489979 RASL11BQ9BPW5 248 aa10.87□□□□□ -0.67
VARS-227ENST00000489979 HSPB9Q9BQS6 159 aa10.87□□□□□ -0.67
VARS-227ENST00000489979 BARHL1Q9BZE3 327 aa10.87□□□□□ -0.67
VARS-227ENST00000489979 NCOR1P1Q9H4R4 102 aa10.87□□□□□ -0.67
VARS-227ENST00000489979 TRAV39A0A0B4J263 110 aa10.86□□□□□ -0.67
VARS-227ENST00000489979 TRAV24A0A0B4J272 114 aa10.86□□□□□ -0.67
VARS-227ENST00000489979 ZAR1LA6NP61 321 aa10.86□□□□□ -0.67
VARS-227ENST00000489979 MT-ND2P03891 347 aa10.86□□□□□ -0.67
VARS-227ENST00000489979 HCKP08631 526 aa10.86□□□□□ -0.67
VARS-227ENST00000489979 OR8U8P0C7N1 319 aa10.86□□□□□ -0.67
VARS-227ENST00000489979 TMEM225BP0DP42 221 aa10.86□□□□□ -0.67
VARS-227ENST00000489979 HOXB6P17509 224 aaKnown RBP10.86□□□□□ -0.67
VARS-227ENST00000489979 ISL1P61371 349 aa10.86□□□□□ -0.67
VARS-227ENST00000489979 RSBN1Q5VWQ0 802 aaPredicted RBP10.86□□□□□ -0.67
VARS-227ENST00000489979 ADAMTSL5Q6ZMM2 481 aa10.86□□□□□ -0.67
VARS-227ENST00000489979 ZNF429Q86V71 674 aa10.86□□□□□ -0.67
VARS-227ENST00000489979 SPATA24Q86W54 205 aa10.86□□□□□ -0.67
VARS-227ENST00000489979 OR10A7Q8NGE5 316 aa10.86□□□□□ -0.67
VARS-227ENST00000489979 OR10AC1Q8NH08 325 aa10.86□□□□□ -0.67
VARS-227ENST00000489979 MYOZ3Q8TDC0 251 aa10.86□□□□□ -0.67
VARS-227ENST00000489979 UTP4Q969X6 686 aaKnown RBP10.86□□□□□ -0.67
VARS-227ENST00000489979 GNB4Q9HAV0 340 aa10.86□□□□□ -0.67
VARS-227ENST00000489979 ISYNA1Q9NPH2 558 aa10.86□□□□□ -0.67
VARS-227ENST00000489979 MYRFQ9Y2G1 1151 aa10.86□□□□□ -0.67
VARS-227ENST00000489979 I3L521 148 aa10.85□□□□□ -0.67
VARS-227ENST00000489979 ISG15P05161 165 aa10.85□□□□□ -0.67
VARS-227ENST00000489979 SPNP16150 400 aa10.85□□□□□ -0.67
VARS-227ENST00000489979 ATP6V1E1P36543 226 aa10.85□□□□□ -0.67
VARS-227ENST00000489979 MTNR1BP49286 362 aa10.85□□□□□ -0.67
VARS-227ENST00000489979 ZP1P60852 638 aa10.85□□□□□ -0.67
VARS-227ENST00000489979 ZNF85Q03923 595 aa10.85□□□□□ -0.67
VARS-227ENST00000489979 KIAA0141Q14154 515 aaPredicted RBP10.85□□□□□ -0.67
VARS-227ENST00000489979 FAM53AQ6NSI3 398 aaPredicted RBP10.85□□□□□ -0.67
VARS-227ENST00000489979 OR51A4Q8NGJ6 313 aa10.85□□□□□ -0.67
VARS-227ENST00000489979 CNIH3Q8TBE1 160 aa10.85□□□□□ -0.67
VARS-227ENST00000489979 PLPPR1Q8TBJ4 325 aa10.85□□□□□ -0.67
VARS-227ENST00000489979 RBMXL1Q96E39 390 aaKnown RBP10.85□□□□□ -0.67
VARS-227ENST00000489979 OR5B12Q96R08 314 aa10.85□□□□□ -0.67
VARS-227ENST00000489979 THTPAQ9BU02 230 aa10.85□□□□□ -0.67
VARS-227ENST00000489979 KLK15Q9H2R5 256 aa10.85□□□□□ -0.67
VARS-227ENST00000489979 FRRS1LQ9P0K9 344 aa10.85□□□□□ -0.67
VARS-227ENST00000489979 TRIM64CA6NLI5 447 aa10.84□□□□□ -0.67
VARS-227ENST00000489979 ZNF736B4DX44 427 aaPredicted RBP10.84□□□□□ -0.67
VARS-227ENST00000489979 MOSP00540 346 aa10.84□□□□□ -0.67
VARS-227ENST00000489979 IGF1P05019 195 aa10.84□□□□□ -0.67
VARS-227ENST00000489979 DBTP11182 482 aaKnown RBP10.84□□□□□ -0.67
VARS-227ENST00000489979 GP9P14770 177 aa10.84□□□□□ -0.67
VARS-227ENST00000489979 CALB2P22676 271 aa10.84□□□□□ -0.67
VARS-227ENST00000489979 CD1BP29016 333 aa10.84□□□□□ -0.67
VARS-227ENST00000489979 SOX6P35712 828 aa10.84□□□□□ -0.67
VARS-227ENST00000489979 F2RL1P55085 397 aa10.84□□□□□ -0.67
VARS-227ENST00000489979 NANOS3P60323 173 aaKnown RBP10.84□□□□□ -0.67
VARS-227ENST00000489979 GNB1P62873 340 aa10.84□□□□□ -0.67
VARS-227ENST00000489979 ZNF616Q08AN1 781 aa10.84□□□□□ -0.67
VARS-227ENST00000489979 ZNF491Q8N8L2 437 aa10.84□□□□□ -0.67
VARS-227ENST00000489979 TMEM104Q8NE00 496 aa10.84□□□□□ -0.67
VARS-227ENST00000489979 OR13C3Q8NGS6 347 aa10.84□□□□□ -0.67
VARS-227ENST00000489979 RTN4IP1Q8WWV3 396 aaPredicted RBP10.84□□□□□ -0.67
VARS-227ENST00000489979 DCUN1D4Q92564 292 aa10.84□□□□□ -0.67
VARS-227ENST00000489979 UBE2E2Q96LR5 201 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms