RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 MUC3AQ02505 3323 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 EYSQ5T1H1 3165 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 IGHV2-26A0A0B4J1V2 119 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 IGLC7A0M8Q6 106 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 FAM24AA6NFZ4 105 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 DIRC3C9JPN6 131 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 TMEM250H0YL14 139 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 SDCBPO00560 298 aaPredicted RBP4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 ERI3O43414 337 aaKnown RBP4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 RAMP3O60896 148 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 VENTXO95231 258 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 SERPINA7P05543 415 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 HPNP05981 417 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 CTSEP14091 401 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 CD99P14209 185 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 RPS12P25398 132 aaKnown RBP4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 OTX1P32242 354 aaPredicted RBP4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 CDKN1AP38936 164 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 GABRA2P47869 451 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 LGALS7P47929 136 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 COMPP49747 757 aaPredicted RBP4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 SNU13P55769 128 aaKnown RBP4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 LGALS4P56470 323 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 BAXQ07812 192 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 FOXL1Q12952 345 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 SCGB2A2Q13296 93 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 PLPPR5Q32ZL2 321 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 LRRC10Q5BKY1 277 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 FAM71F2Q6NXP2 309 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 WDR73Q6P4I2 378 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 MEX3BQ6ZN04 569 aaKnown RBP4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 C22orf34Q6ZV56 151 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 BHLHA15Q7RTS1 189 aaPredicted RBP4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 ZAR1Q86SH2 424 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 NRSN1Q8IZ57 195 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 LGI3Q8N145 548 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 C17orf78Q8N4C9 275 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 CDRT4Q8N9R6 151 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 ZNF519Q8TB69 540 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 WBP2Q969T9 261 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 PINX1Q96BK5 328 aaKnown RBP4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 STARD4Q96DR4 205 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 DNAJA3Q96EY1 480 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 ABHD14BQ96IU4 210 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 LINC00615Q96LM1 132 aaPredicted RBP4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 JMJD8Q96S16 334 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 PTPN18Q99952 460 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 SLC46A2Q9BY10 475 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 VN1R1Q9GZP7 353 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 MEGF9Q9H1U4 602 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 C6orf106Q9H6K1 298 aaPredicted RBP4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 PLAGL1Q9UM63 463 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 MRPS28Q9Y2Q9 187 aaKnown RBP4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 SIT1Q9Y3P8 196 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 LRP12Q9Y561 859 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 ATP23Q9Y6H3 246 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 R4GMQ9 66 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 EML5Q05BV3 1969 aa4.13□□□□□ -1.75
SNRNP40-206ENST00000489853 KIAA0100Q14667 2235 aaKnown RBP4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 A0A0U1RQK1 487 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 IGSF23A1L1A6 192 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 GAGE12BA1L429 117 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 ZFP92A6NM28 416 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 GJE1A6NN92 205 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 C4orf47A7E2U8 309 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 CEBPZOSA8MTT3 80 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 HIDE1A8MVS5 230 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 G3V4G9 280 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 J3QR06 171 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 CDIPTO14735 213 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 SOCS1O15524 211 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 NPIPB7O75200 414 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 SRSF10O75494 262 aaKnown RBP4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 RAD51DO75771 328 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 HLA-HP01893 362 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 REG1AP05451 166 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 CELA3BP08861 270 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 PSG1P11464 419 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 HMGA1P17096 107 aaKnown RBP4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 EN2P19622 333 aaPredicted RBP4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 GABRA3P34903 492 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 SLC11A1P49279 550 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 ASCL1P50553 236 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 TMEM50BP56557 158 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 LCN6P62502 163 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 PAX2Q02962 417 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 Q0VG73 95 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 ARFRP1Q13795 201 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 EXOSC7Q15024 291 aaKnown RBP4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 CNN3Q15417 329 aaKnown RBP4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 ZNF74Q16587 644 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 ALG10Q5BKT4 473 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 DNM1P34Q6PK57 102 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 Q6ZVH6 145 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 COX15Q7KZN9 410 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 LYZL2Q7Z4W2 148 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 Q8N1Y9 231 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 FAM89BQ8N5H3 189 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 TMEM252Q8N6L7 170 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms