RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 COQ2Q96H96 371 aa18.08■□□□□ 0.49
SMC4-221ENST00000489573 GAFA1Q96PS6 74 aa18.08■□□□□ 0.49
SMC4-221ENST00000489573 MAB21L2Q9Y586 359 aa18.08■□□□□ 0.49
SMC4-221ENST00000489573 RAI1Q7Z5J4 1906 aaPredicted RBP18.08■□□□□ 0.48
SMC4-221ENST00000489573 A0A0B4J293 547 aa18.08■□□□□ 0.48
SMC4-221ENST00000489573 FUOMA2VDF0 154 aa18.08■□□□□ 0.48
SMC4-221ENST00000489573 K7N7A8 449 aa18.08■□□□□ 0.48
SMC4-221ENST00000489573 MGST3O14880 152 aa18.08■□□□□ 0.48
SMC4-221ENST00000489573 FABP7O15540 132 aa18.08■□□□□ 0.48
SMC4-221ENST00000489573 CLDN1O95832 211 aa18.08■□□□□ 0.48
SMC4-221ENST00000489573 OR5H8P0DN80 308 aa18.08■□□□□ 0.48
SMC4-221ENST00000489573 BCAP31P51572 246 aa18.08■□□□□ 0.48
SMC4-221ENST00000489573 HLA-DRB3P79483 266 aa18.08■□□□□ 0.48
SMC4-221ENST00000489573 AESQ08117 197 aa18.08■□□□□ 0.48
SMC4-221ENST00000489573 KRBOX4Q5JUW0 171 aa18.08■□□□□ 0.48
SMC4-221ENST00000489573 ZNF788Q6ZQV5 615 aa18.08■□□□□ 0.48
SMC4-221ENST00000489573 DLL4Q9NR61 685 aa18.08■□□□□ 0.48
SMC4-221ENST00000489573 PEX14O75381 377 aa18.07■□□□□ 0.48
SMC4-221ENST00000489573 RCC1P18754 421 aaPredicted RBP18.07■□□□□ 0.48
SMC4-221ENST00000489573 ATPAF1Q5TC12 328 aaPredicted RBP18.07■□□□□ 0.48
SMC4-221ENST00000489573 ZNRF1Q8ND25 227 aa18.07■□□□□ 0.48
SMC4-221ENST00000489573 TERB2Q8NHR7 220 aa18.07■□□□□ 0.48
SMC4-221ENST00000489573 CCL13Q99616 98 aa18.07■□□□□ 0.48
SMC4-221ENST00000489573 DNTTIP1Q9H147 329 aa18.07■□□□□ 0.48
SMC4-221ENST00000489573 MYOZ1Q9NP98 299 aaPredicted RBP18.07■□□□□ 0.48
SMC4-221ENST00000489573 MBNL3Q9NUK0 354 aaKnown RBP18.07■□□□□ 0.48
SMC4-221ENST00000489573 KIF25Q9UIL4 384 aa18.07■□□□□ 0.48
SMC4-221ENST00000489573 A1L4Q6 167 aa18.06■□□□□ 0.48
SMC4-221ENST00000489573 TK1P04183 234 aa18.06■□□□□ 0.48
SMC4-221ENST00000489573 SCTP09683 121 aa18.06■□□□□ 0.48
SMC4-221ENST00000489573 COX6B1P14854 86 aa18.06■□□□□ 0.48
SMC4-221ENST00000489573 COL8A2P25067 703 aa18.06■□□□□ 0.48
SMC4-221ENST00000489573 MRPS11P82912 194 aaKnown RBP18.06■□□□□ 0.48
SMC4-221ENST00000489573 LHFPL1Q86WI0 220 aa18.06■□□□□ 0.48
SMC4-221ENST00000489573 CADM3Q8N126 398 aa18.06■□□□□ 0.48
SMC4-221ENST00000489573 FAM234AQ9H0X4 552 aa18.06■□□□□ 0.48
SMC4-221ENST00000489573 CLEC4MQ9H2X3 399 aaPredicted RBP18.06■□□□□ 0.48
SMC4-221ENST00000489573 MYO18BQ8IUG5 2567 aa18.06■□□□□ 0.48
SMC4-221ENST00000489573 FLNBO75369 2602 aaKnown RBP18.06■□□□□ 0.48
SMC4-221ENST00000489573 MEIKINA0A087WXM9 373 aa18.05■□□□□ 0.48
SMC4-221ENST00000489573 TRAV39A0A0B4J263 110 aa18.05■□□□□ 0.48
SMC4-221ENST00000489573 LYNX1G3V0Z9 82 aa18.05■□□□□ 0.48
SMC4-221ENST00000489573 SIGLEC5O15389 551 aa18.05■□□□□ 0.48
SMC4-221ENST00000489573 RP2O75695 350 aa18.05■□□□□ 0.48
SMC4-221ENST00000489573 RLN1P04808 185 aa18.05■□□□□ 0.48
SMC4-221ENST00000489573 LYNX1P0DP58 116 aa18.05■□□□□ 0.48
SMC4-221ENST00000489573 SELLP14151 372 aa18.05■□□□□ 0.48
SMC4-221ENST00000489573 GLP1RP43220 463 aa18.05■□□□□ 0.48
SMC4-221ENST00000489573 IL13RA1P78552 427 aa18.05■□□□□ 0.48
SMC4-221ENST00000489573 EDDM3AQ14507 147 aa18.05■□□□□ 0.48
SMC4-221ENST00000489573 FAM216BQ8N7L0 139 aa18.05■□□□□ 0.48
SMC4-221ENST00000489573 TMEM185AQ8NFB2 350 aa18.05■□□□□ 0.48
SMC4-221ENST00000489573 OR5D13Q8NGL4 314 aa18.05■□□□□ 0.48
SMC4-221ENST00000489573 OR4A4PQ8NGN8 299 aa18.05■□□□□ 0.48
SMC4-221ENST00000489573 OR6F1Q8NGZ6 308 aa18.05■□□□□ 0.48
SMC4-221ENST00000489573 MRGPRFQ96AM1 343 aa18.05■□□□□ 0.48
SMC4-221ENST00000489573 ALG5Q9Y673 324 aa18.05■□□□□ 0.48
SMC4-221ENST00000489573 UBR5O95071 2799 aaPredicted RBP18.05■□□□□ 0.48
SMC4-221ENST00000489573 A0A1B0GW55 424 aa18.04■□□□□ 0.48
SMC4-221ENST00000489573 CTXN2P0C2S0 81 aa18.04■□□□□ 0.48
SMC4-221ENST00000489573 DUX4L2P0CJ85 424 aa18.04■□□□□ 0.48
SMC4-221ENST00000489573 DUX4L3P0CJ86 424 aa18.04■□□□□ 0.48
SMC4-221ENST00000489573 DUX4L4P0CJ87 422 aa18.04■□□□□ 0.48
SMC4-221ENST00000489573 DUX4L5P0CJ88 424 aa18.04■□□□□ 0.48
SMC4-221ENST00000489573 DUX4L6P0CJ89 424 aa18.04■□□□□ 0.48
SMC4-221ENST00000489573 DUX4L7P0CJ90 424 aa18.04■□□□□ 0.48
SMC4-221ENST00000489573 GLIPR1P48060 266 aa18.04■□□□□ 0.48
SMC4-221ENST00000489573 MECP2P51608 486 aaKnown RBP18.04■□□□□ 0.48
SMC4-221ENST00000489573 HMGN3Q15651 99 aa18.04■□□□□ 0.48
SMC4-221ENST00000489573 KCNJ8Q15842 424 aa18.04■□□□□ 0.48
SMC4-221ENST00000489573 IGSF11Q5DX21 431 aa18.04■□□□□ 0.48
SMC4-221ENST00000489573 DUX4L9Q6RFH8 374 aaPredicted RBP18.04■□□□□ 0.48
SMC4-221ENST00000489573 ZDHHC22Q8N966 263 aa18.04■□□□□ 0.48
SMC4-221ENST00000489573 GIMAP1Q8WWP7 306 aa18.04■□□□□ 0.48
SMC4-221ENST00000489573 ZNF2Q9BSG1 426 aaPredicted RBP18.04■□□□□ 0.48
SMC4-221ENST00000489573 DUX4Q9UBX2 424 aa18.04■□□□□ 0.48
SMC4-221ENST00000489573 PRAF2O60831 178 aa18.04■□□□□ 0.48
SMC4-221ENST00000489573 ANXA7P20073 488 aaKnown RBP18.04■□□□□ 0.48
SMC4-221ENST00000489573 CDKN1AP38936 164 aa18.04■□□□□ 0.48
SMC4-221ENST00000489573 SEC61A1P61619 476 aaKnown RBP18.04■□□□□ 0.48
SMC4-221ENST00000489573 HERPUD1Q15011 391 aa18.04■□□□□ 0.48
SMC4-221ENST00000489573 ZNF660Q6AZW8 331 aaPredicted RBP18.04■□□□□ 0.48
SMC4-221ENST00000489573 DHRS11Q6UWP2 260 aa18.04■□□□□ 0.48
SMC4-221ENST00000489573 SLC36A1Q7Z2H8 476 aa18.04■□□□□ 0.48
SMC4-221ENST00000489573 C5orf24Q7Z6I8 188 aa18.04■□□□□ 0.48
SMC4-221ENST00000489573 TPRX1Q8N7U7 411 aa18.04■□□□□ 0.48
SMC4-221ENST00000489573 MED30Q96HR3 178 aa18.04■□□□□ 0.48
SMC4-221ENST00000489573 CABLES2Q9BTV7 478 aa18.04■□□□□ 0.48
SMC4-221ENST00000489573 BEX2Q9BXY8 128 aa18.04■□□□□ 0.48
SMC4-221ENST00000489573 PLEKHF2Q9H8W4 249 aa18.04■□□□□ 0.48
SMC4-221ENST00000489573 BEX1Q9HBH7 125 aa18.04■□□□□ 0.48
SMC4-221ENST00000489573 KCNIP1Q9NZI2 227 aa18.04■□□□□ 0.48
SMC4-221ENST00000489573 VSIG4Q9Y279 399 aa18.04■□□□□ 0.48
SMC4-221ENST00000489573 TMPRSS2O15393 492 aa18.03■□□□□ 0.48
SMC4-221ENST00000489573 FSTL3O95633 263 aa18.03■□□□□ 0.48
SMC4-221ENST00000489573 DAOP14920 347 aa18.03■□□□□ 0.48
SMC4-221ENST00000489573 NPY4RP50391 375 aa18.03■□□□□ 0.48
SMC4-221ENST00000489573 P2RX3P56373 397 aa18.03■□□□□ 0.48
SMC4-221ENST00000489573 C6orf183Q5T699 404 aa18.03■□□□□ 0.48
SMC4-221ENST00000489573 AADACL3Q5VUY0 350 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms