RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 DEFA3P59666 94 aa11.82□□□□□ -0.52
CLDN11-209ENST00000489485 PITPNAQ00169 270 aa11.82□□□□□ -0.52
CLDN11-209ENST00000489485 IFITM3Q01628 133 aa11.82□□□□□ -0.52
CLDN11-209ENST00000489485 GUCA2AQ02747 115 aa11.82□□□□□ -0.52
CLDN11-209ENST00000489485 ARFRP1Q13795 201 aa11.82□□□□□ -0.52
CLDN11-209ENST00000489485 ATXN7L3Q14CW9 347 aaPredicted RBP11.82□□□□□ -0.52
CLDN11-209ENST00000489485 HACD4Q5VWC8 232 aa11.82□□□□□ -0.52
CLDN11-209ENST00000489485 GDPD3Q7L5L3 318 aa11.82□□□□□ -0.52
CLDN11-209ENST00000489485 OR5D13Q8NGL4 314 aa11.82□□□□□ -0.52
CLDN11-209ENST00000489485 NUDCD2Q8WVJ2 157 aa11.82□□□□□ -0.52
CLDN11-209ENST00000489485 H1FXQ92522 213 aaKnown RBP11.82□□□□□ -0.52
CLDN11-209ENST00000489485 FAM234AQ9H0X4 552 aa11.82□□□□□ -0.52
CLDN11-209ENST00000489485 AK3Q9UIJ7 227 aa11.82□□□□□ -0.52
CLDN11-209ENST00000489485 MAST4O15021 2626 aa11.82□□□□□ -0.52
CLDN11-209ENST00000489485 MEIS3P1A6NDR6 274 aa11.81□□□□□ -0.52
CLDN11-209ENST00000489485 SERPINE3A8MV23 424 aa11.81□□□□□ -0.52
CLDN11-209ENST00000489485 ATP6V1G1O75348 118 aa11.81□□□□□ -0.52
CLDN11-209ENST00000489485 GSTP1P09211 210 aaKnown RBP11.81□□□□□ -0.52
CLDN11-209ENST00000489485 OR3A1P47881 315 aa11.81□□□□□ -0.52
CLDN11-209ENST00000489485 EIF2B2P49770 351 aaKnown RBP11.81□□□□□ -0.52
CLDN11-209ENST00000489485 EDDM3BP56851 147 aa11.81□□□□□ -0.52
CLDN11-209ENST00000489485 LCN2P80188 198 aa11.81□□□□□ -0.52
CLDN11-209ENST00000489485 RBM39Q14498 530 aaKnown RBP11.81□□□□□ -0.52
CLDN11-209ENST00000489485 EDDM3AQ14507 147 aa11.81□□□□□ -0.52
CLDN11-209ENST00000489485 Q8N402 240 aa11.81□□□□□ -0.52
CLDN11-209ENST00000489485 HDHD3Q9BSH5 251 aaPredicted RBP11.81□□□□□ -0.52
CLDN11-209ENST00000489485 SRRQ9GZT4 340 aa11.81□□□□□ -0.52
CLDN11-209ENST00000489485 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.81□□□□□ -0.52
CLDN11-209ENST00000489485 MELTFP08582 738 aa11.8□□□□□ -0.52
CLDN11-209ENST00000489485 PTBP1P26599 531 aaKnown RBP eCLIP11.8□□□□□ -0.52
CLDN11-209ENST00000489485 PRSS3P35030 304 aa11.8□□□□□ -0.52
CLDN11-209ENST00000489485 GNG2P59768 71 aa11.8□□□□□ -0.52
CLDN11-209ENST00000489485 DGCR2P98153 550 aa11.8□□□□□ -0.52
CLDN11-209ENST00000489485 AESQ08117 197 aa11.8□□□□□ -0.52
CLDN11-209ENST00000489485 ARL6IP1Q15041 203 aa11.8□□□□□ -0.52
CLDN11-209ENST00000489485 BTN2A1Q7KYR7 527 aa11.8□□□□□ -0.52
CLDN11-209ENST00000489485 LYSMD2Q8IV50 215 aa11.8□□□□□ -0.52
CLDN11-209ENST00000489485 TPRX1Q8N7U7 411 aa11.8□□□□□ -0.52
CLDN11-209ENST00000489485 C15orf40Q8WUR7 153 aa11.8□□□□□ -0.52
CLDN11-209ENST00000489485 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.8□□□□□ -0.52
CLDN11-209ENST00000489485 RABL2AQ9UBK7 228 aaPredicted RBP11.8□□□□□ -0.52
CLDN11-209ENST00000489485 RABL2BQ9UNT1 228 aa11.8□□□□□ -0.52
CLDN11-209ENST00000489485 ABCA1O95477 2261 aa11.8□□□□□ -0.52
CLDN11-209ENST00000489485 MGST3O14880 152 aa11.8□□□□□ -0.52
CLDN11-209ENST00000489485 GPR37O15354 613 aa11.8□□□□□ -0.52
CLDN11-209ENST00000489485 TPPPO94811 219 aa11.8□□□□□ -0.52
CLDN11-209ENST00000489485 FCER2P06734 321 aa11.8□□□□□ -0.52
CLDN11-209ENST00000489485 ZFP36P26651 326 aaKnown RBP11.8□□□□□ -0.52
CLDN11-209ENST00000489485 MRPS15P82914 257 aaKnown RBP11.8□□□□□ -0.52
CLDN11-209ENST00000489485 TMEM249Q2WGJ8 235 aa11.8□□□□□ -0.52
CLDN11-209ENST00000489485 CADM3Q8N126 398 aa11.8□□□□□ -0.52
CLDN11-209ENST00000489485 OR52I2Q8NH67 350 aa11.8□□□□□ -0.52
CLDN11-209ENST00000489485 PLPPR1Q8TBJ4 325 aa11.8□□□□□ -0.52
CLDN11-209ENST00000489485 FCAMRQ8WWV6 532 aa11.8□□□□□ -0.52
CLDN11-209ENST00000489485 SDHCQ99643 169 aaPredicted RBP11.8□□□□□ -0.52
CLDN11-209ENST00000489485 CMSS1Q9BQ75 279 aaKnown RBP11.8□□□□□ -0.52
CLDN11-209ENST00000489485 ABCB10Q9NRK6 738 aa11.8□□□□□ -0.52
CLDN11-209ENST00000489485 KLK11Q9UBX7 282 aa11.8□□□□□ -0.52
CLDN11-209ENST00000489485 CSPG4Q6UVK1 2322 aa11.79□□□□□ -0.52
CLDN11-209ENST00000489485 TLN2Q9Y4G6 2542 aa11.79□□□□□ -0.52
CLDN11-209ENST00000489485 FOXH1O75593 365 aa11.79□□□□□ -0.52
CLDN11-209ENST00000489485 CSN2P05814 226 aa11.79□□□□□ -0.52
CLDN11-209ENST00000489485 GLAP06280 429 aa11.79□□□□□ -0.52
CLDN11-209ENST00000489485 CD3GP09693 182 aa11.79□□□□□ -0.52
CLDN11-209ENST00000489485 PNLIPRP3Q17RR3 467 aa11.79□□□□□ -0.52
CLDN11-209ENST00000489485 SVEP1Q4LDE5 3571 aa11.79□□□□□ -0.52
CLDN11-209ENST00000489485 KRBOX4Q5JUW0 171 aa11.79□□□□□ -0.52
CLDN11-209ENST00000489485 SPNS3Q6ZMD2 512 aa11.79□□□□□ -0.52
CLDN11-209ENST00000489485 DSCAML1Q8TD84 2053 aa11.79□□□□□ -0.52
CLDN11-209ENST00000489485 ZNF230Q9UIE0 474 aaPredicted RBP11.79□□□□□ -0.52
CLDN11-209ENST00000489485 LOC105371242A0A075B767 164 aa11.78□□□□□ -0.52
CLDN11-209ENST00000489485 MEX3AA1L020 520 aaKnown RBP11.78□□□□□ -0.52
CLDN11-209ENST00000489485 B4DSR2 109 aa11.78□□□□□ -0.52
CLDN11-209ENST00000489485 GABARAPH6UMI1 98 aa11.78□□□□□ -0.52
CLDN11-209ENST00000489485 CTDSPLO15194 276 aa11.78□□□□□ -0.52
CLDN11-209ENST00000489485 SSX5O60225 188 aa11.78□□□□□ -0.52
CLDN11-209ENST00000489485 KCNJ3P48549 501 aa11.78□□□□□ -0.52
CLDN11-209ENST00000489485 RPL31P62899 125 aaKnown RBP11.78□□□□□ -0.52
CLDN11-209ENST00000489485 BAK1Q16611 211 aa11.78□□□□□ -0.52
CLDN11-209ENST00000489485 CD276Q5ZPR3 534 aa11.78□□□□□ -0.52
CLDN11-209ENST00000489485 TRAPPC6BQ86SZ2 158 aa11.78□□□□□ -0.52
CLDN11-209ENST00000489485 GDPD1Q8N9F7 314 aa11.78□□□□□ -0.52
CLDN11-209ENST00000489485 SMIM4Q8WVI0 70 aa11.78□□□□□ -0.52
CLDN11-209ENST00000489485 THAP7Q9BT49 309 aaPredicted RBP11.78□□□□□ -0.52
CLDN11-209ENST00000489485 CCDC32Q9BV29 185 aa11.78□□□□□ -0.52
CLDN11-209ENST00000489485 CHMP1AQ9HD42 196 aaPredicted RBP11.78□□□□□ -0.52
CLDN11-209ENST00000489485 KIAA1324LA8MWY0 1029 aaPredicted RBP11.78□□□□□ -0.52
CLDN11-209ENST00000489485 A8MXK9 166 aa11.78□□□□□ -0.52
CLDN11-209ENST00000489485 LANCL1O43813 399 aa11.78□□□□□ -0.52
CLDN11-209ENST00000489485 ECDO95905 644 aaPredicted RBP11.78□□□□□ -0.52
CLDN11-209ENST00000489485 LPLP06858 475 aa11.78□□□□□ -0.52
CLDN11-209ENST00000489485 GLIPR1P48060 266 aa11.78□□□□□ -0.52
CLDN11-209ENST00000489485 MRPS10P82664 201 aaKnown RBP11.78□□□□□ -0.52
CLDN11-209ENST00000489485 GVQW1Q8N7I0 195 aa11.78□□□□□ -0.52
CLDN11-209ENST00000489485 LINC01356Q8N9X3 169 aa11.78□□□□□ -0.52
CLDN11-209ENST00000489485 POC5Q8NA72 575 aa11.78□□□□□ -0.52
CLDN11-209ENST00000489485 OR4K15Q8NH41 348 aa11.78□□□□□ -0.52
CLDN11-209ENST00000489485 GPX8Q8TED1 209 aa11.78□□□□□ -0.52
CLDN11-209ENST00000489485 MAFIPQ8WZ33 124 aa11.78□□□□□ -0.52
CLDN11-209ENST00000489485 MSI2Q96DH6 328 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms