RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 RSBN1Q5VWQ0 802 aaPredicted RBP10.85□□□□□ -0.67
CCL28-202ENST00000489442 ZNF367Q7RTV3 350 aa10.85□□□□□ -0.67
CCL28-202ENST00000489442 RTN4RL2Q86UN3 420 aa10.85□□□□□ -0.67
CCL28-202ENST00000489442 SVOPQ8N4V2 548 aa10.85□□□□□ -0.67
CCL28-202ENST00000489442 PLPPR1Q8TBJ4 325 aa10.85□□□□□ -0.67
CCL28-202ENST00000489442 AJUBAQ96IF1 538 aa10.85□□□□□ -0.67
CCL28-202ENST00000489442 CST11Q9H112 138 aa10.85□□□□□ -0.67
CCL28-202ENST00000489442 NCOR1P1Q9H4R4 102 aa10.85□□□□□ -0.67
CCL28-202ENST00000489442 ZNF581Q9P0T4 197 aa10.85□□□□□ -0.67
CCL28-202ENST00000489442 GHRLQ9UBU3 117 aa10.85□□□□□ -0.67
CCL28-202ENST00000489442 HILPDAQ9Y5L2 63 aa10.85□□□□□ -0.67
CCL28-202ENST00000489442 TMEM30CPA0ZSE6 113 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 FAM90A8PA6NJQ4 464 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 H3BUI4 141 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 SC5DO75845 299 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 NDUFA7O95182 113 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 UCHL1P09936 223 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 UBBP0CG47 229 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 HTR1DP28221 377 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 PRRX1P54821 245 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 GP2P55259 537 aaKnown RBP10.84□□□□□ -0.67
CCL28-202ENST00000489442 GABARAPL2P60520 117 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 MINOS1Q5TGZ0 78 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 SLC35E4Q6ICL7 350 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 LRRTM1Q86UE6 522 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 OR13A1Q8NGR1 328 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 ZNF596Q8TC21 504 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 MRGPRDQ8TDS7 321 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 FAM46BQ96A09 425 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 ZNF747Q9BV97 191 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 RAB18Q9NP72 206 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 ACOT13Q9NPJ3 140 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 CALYQ9NYX4 217 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 MINOS1-NBL1R4GNA1 71 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 FBN3Q75N90 2809 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 TRAV39A0A0B4J263 110 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 MRPS14O60783 128 aaKnown RBP10.84□□□□□ -0.67
CCL28-202ENST00000489442 MPIG6BO95866 241 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 GZMHP20718 246 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 HTR2CP28335 458 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 GABRA5P31644 462 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 RAB13P51153 203 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 RELBQ01201 579 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 PAX5Q02548 391 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 EMX1Q04741 257 aaPredicted RBP10.84□□□□□ -0.67
CCL28-202ENST00000489442 LTC4SQ16873 150 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 C17orf58Q2M2W7 97 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 RAB12Q6IQ22 244 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 SHISA2Q6UWI4 295 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 BAIAP2L2Q6UXY1 529 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 TMEM91Q6ZNR0 172 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 LYPD6Q86Y78 171 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 TMEM104Q8NE00 496 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 RFESDQ8TAC1 157 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 CCDC107Q8WV48 283 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 CREB3L1Q96BA8 519 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 YTHDF1Q9BYJ9 559 aaKnown RBP10.84□□□□□ -0.67
CCL28-202ENST00000489442 PLGRKTQ9HBL7 147 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 IDI2-AS1Q9NZ38 188 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 DPM3Q9P2X0 92 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 MMP24Q9Y5R2 645 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 PEX16Q9Y5Y5 336 aa10.84□□□□□ -0.67
CCL28-202ENST00000489442 CLPSL1A2RUU4 121 aa10.83□□□□□ -0.68
CCL28-202ENST00000489442 FAM90A10PA6NDY2 464 aa10.83□□□□□ -0.68
CCL28-202ENST00000489442 FAM90A18PA6NE21 464 aa10.83□□□□□ -0.68
CCL28-202ENST00000489442 FAM90A16PA6NEW6 464 aa10.83□□□□□ -0.68
CCL28-202ENST00000489442 FAM90A20PA6NIJ5 464 aa10.83□□□□□ -0.68
CCL28-202ENST00000489442 FAM90A7PA6NKC0 464 aa10.83□□□□□ -0.68
CCL28-202ENST00000489442 FAM90A22PA8MWA6 464 aa10.83□□□□□ -0.68
CCL28-202ENST00000489442 FAM90A12PA8MX19 464 aa10.83□□□□□ -0.68
CCL28-202ENST00000489442 FAM90A5PA8MXJ8 464 aa10.83□□□□□ -0.68
CCL28-202ENST00000489442 FAM90A23PA8MXZ1 464 aa10.83□□□□□ -0.68
CCL28-202ENST00000489442 AIPO00170 330 aa10.83□□□□□ -0.68
CCL28-202ENST00000489442 F2RL2O00254 374 aa10.83□□□□□ -0.68
CCL28-202ENST00000489442 IL1AP01583 271 aa10.83□□□□□ -0.68
CCL28-202ENST00000489442 FAM90A15PP0C7V4 464 aa10.83□□□□□ -0.68
CCL28-202ENST00000489442 FAM90A13PP0C7W8 464 aa10.83□□□□□ -0.68
CCL28-202ENST00000489442 FAM90A14PP0C7W9 464 aa10.83□□□□□ -0.68
CCL28-202ENST00000489442 FAM90A24PP0C7X0 464 aa10.83□□□□□ -0.68
CCL28-202ENST00000489442 FUT3P21217 361 aa10.83□□□□□ -0.68
CCL28-202ENST00000489442 CALRP27797 417 aaKnown RBP10.83□□□□□ -0.68
CCL28-202ENST00000489442 GDNFP39905 211 aa10.83□□□□□ -0.68
CCL28-202ENST00000489442 CEACAM3P40198 252 aa10.83□□□□□ -0.68
CCL28-202ENST00000489442 ARHGDIBP52566 201 aa10.83□□□□□ -0.68
CCL28-202ENST00000489442 FABP5Q01469 135 aa10.83□□□□□ -0.68
CCL28-202ENST00000489442 C1orf100Q5SVJ3 147 aa10.83□□□□□ -0.68
CCL28-202ENST00000489442 OLFML2AQ68BL7 652 aa10.83□□□□□ -0.68
CCL28-202ENST00000489442 DYNAPQ8N1N2 210 aa10.83□□□□□ -0.68
CCL28-202ENST00000489442 OR6M1Q8NGM8 313 aa10.83□□□□□ -0.68
CCL28-202ENST00000489442 KCNG3Q8TAE7 436 aa10.83□□□□□ -0.68
CCL28-202ENST00000489442 KIRREL1Q96J84 757 aa10.83□□□□□ -0.68
CCL28-202ENST00000489442 Q96M66 194 aa10.83□□□□□ -0.68
CCL28-202ENST00000489442 ZNF286AQ9HBT8 521 aa10.83□□□□□ -0.68
CCL28-202ENST00000489442 ETAA1Q9NY74 926 aa10.83□□□□□ -0.68
CCL28-202ENST00000489442 PITPNC1Q9UKF7 332 aa10.83□□□□□ -0.68
CCL28-202ENST00000489442 TRAPPC2LQ9UL33 140 aa10.83□□□□□ -0.68
CCL28-202ENST00000489442 AK6Q9Y3D8 172 aaKnown RBP10.83□□□□□ -0.68
CCL28-202ENST00000489442 RNF114Q9Y508 228 aa10.83□□□□□ -0.68
CCL28-202ENST00000489442 LRRC42Q9Y546 428 aa10.83□□□□□ -0.68
CCL28-202ENST00000489442 VGLL3A8MV65 326 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms