RNA–Protein interactions for RNA: ENST00000489390.1

SHOC2-205, Transcript of SHOC2, leucine rich repeat scaffold protein, human

TSL 5

Gene SHOC2, Length 815 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHOC2-205	ENST00000489390	HMGN1	P05114	100 aa		10.9	□□□□□ -0.66
SHOC2-205	ENST00000489390	HTR1F	P30939	366 aa		10.9	□□□□□ -0.66
SHOC2-205	ENST00000489390	MAGEA2	P43356	314 aa		10.9	□□□□□ -0.66
SHOC2-205	ENST00000489390	RNLS	Q5VYX0	342 aa		10.9	□□□□□ -0.66
SHOC2-205	ENST00000489390		Q6P435	159 aa		10.9	□□□□□ -0.66
SHOC2-205	ENST00000489390	ZNF322	Q6U7Q0	402 aa	Predicted RBP	10.9	□□□□□ -0.66
SHOC2-205	ENST00000489390	HAPLN4	Q86UW8	402 aa		10.9	□□□□□ -0.66
SHOC2-205	ENST00000489390	CCDC54	Q8NEL0	328 aa		10.9	□□□□□ -0.66
SHOC2-205	ENST00000489390	OR13A1	Q8NGR1	328 aa		10.9	□□□□□ -0.66
SHOC2-205	ENST00000489390	APOL4	Q9BPW4	351 aa		10.9	□□□□□ -0.66
SHOC2-205	ENST00000489390	ELOVL1	Q9BW60	279 aa		10.9	□□□□□ -0.66
SHOC2-205	ENST00000489390	TUBA4B	Q9H853	241 aa		10.9	□□□□□ -0.66
SHOC2-205	ENST00000489390	WSB1	Q9Y6I7	421 aa		10.9	□□□□□ -0.66
SHOC2-205	ENST00000489390	DNAH10	Q8IVF4	4471 aa		10.9	□□□□□ -0.66
SHOC2-205	ENST00000489390		A0A1W2PPE3	182 aa		10.89	□□□□□ -0.67
SHOC2-205	ENST00000489390	SYT7	O43581	403 aa		10.89	□□□□□ -0.67
SHOC2-205	ENST00000489390	KDM4B	O94953	1096 aa		10.89	□□□□□ -0.67
SHOC2-205	ENST00000489390	LGALS1	P09382	135 aa	Known RBP	10.89	□□□□□ -0.67
SHOC2-205	ENST00000489390	F2RL1	P55085	397 aa		10.89	□□□□□ -0.67
SHOC2-205	ENST00000489390	MTCP1	P56278	107 aa		10.89	□□□□□ -0.67
SHOC2-205	ENST00000489390	PDZK1IP1	Q13113	114 aa		10.89	□□□□□ -0.67
SHOC2-205	ENST00000489390	LTC4S	Q16873	150 aa		10.89	□□□□□ -0.67
SHOC2-205	ENST00000489390	PLEKHG7	Q6ZR37	379 aa		10.89	□□□□□ -0.67
SHOC2-205	ENST00000489390	ANKRD13B	Q86YJ7	626 aa		10.89	□□□□□ -0.67
SHOC2-205	ENST00000489390	OR10G2	Q8NGC3	310 aa		10.89	□□□□□ -0.67
SHOC2-205	ENST00000489390	OR51T1	Q8NGJ9	327 aa		10.89	□□□□□ -0.67
SHOC2-205	ENST00000489390	PP6455	Q8WZ26	134 aa		10.89	□□□□□ -0.67
SHOC2-205	ENST00000489390	C10orf35	Q96D05	121 aa		10.89	□□□□□ -0.67
SHOC2-205	ENST00000489390	FAM110A	Q9BQ89	295 aa		10.89	□□□□□ -0.67
SHOC2-205	ENST00000489390	REEP1	Q9H902	201 aa		10.89	□□□□□ -0.67
SHOC2-205	ENST00000489390	RHOF	Q9HBH0	211 aa		10.89	□□□□□ -0.67
SHOC2-205	ENST00000489390	MRM2	Q9UI43	246 aa	Known RBP	10.89	□□□□□ -0.67
SHOC2-205	ENST00000489390	SAMHD1	Q9Y3Z3	626 aa	Known RBP	10.89	□□□□□ -0.67
SHOC2-205	ENST00000489390	MEIKIN	A0A087WXM9	373 aa		10.88	□□□□□ -0.67
SHOC2-205	ENST00000489390	IGKV1-12	A0A0C4DH73	117 aa		10.88	□□□□□ -0.67
SHOC2-205	ENST00000489390	CCDC182	A6NF36	153 aa		10.88	□□□□□ -0.67
SHOC2-205	ENST00000489390	ARPC1B	O15143	372 aa	Known RBP	10.88	□□□□□ -0.67
SHOC2-205	ENST00000489390	MAGEB4	O15481	346 aa	Predicted RBP	10.88	□□□□□ -0.67
SHOC2-205	ENST00000489390	CCDC22	O60826	627 aa		10.88	□□□□□ -0.67
SHOC2-205	ENST00000489390	IGKV1D-12	P01611	117 aa		10.88	□□□□□ -0.67
SHOC2-205	ENST00000489390	CXCR4	P61073	352 aa		10.88	□□□□□ -0.67
SHOC2-205	ENST00000489390	ODF4	Q2M2E3	257 aa		10.88	□□□□□ -0.67
SHOC2-205	ENST00000489390	RFESD	Q8TAC1	157 aa		10.88	□□□□□ -0.67
SHOC2-205	ENST00000489390	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	10.88	□□□□□ -0.67
SHOC2-205	ENST00000489390	FLYWCH2	Q96CP2	140 aa	Known RBP	10.88	□□□□□ -0.67
SHOC2-205	ENST00000489390	FEV	Q99581	238 aa		10.88	□□□□□ -0.67
SHOC2-205	ENST00000489390	TMED9	Q9BVK6	235 aa		10.88	□□□□□ -0.67
SHOC2-205	ENST00000489390	KIF25	Q9UIL4	384 aa		10.88	□□□□□ -0.67
SHOC2-205	ENST00000489390	TRAV41	A0A0B4J266	112 aa		10.87	□□□□□ -0.67
SHOC2-205	ENST00000489390	IGKV1-9	A0A0C4DH69	117 aa		10.87	□□□□□ -0.67
SHOC2-205	ENST00000489390	ZNF736	B4DX44	427 aa	Predicted RBP	10.87	□□□□□ -0.67
SHOC2-205	ENST00000489390	DEGS1	O15121	323 aa		10.87	□□□□□ -0.67
SHOC2-205	ENST00000489390	ATP6V0E1	O15342	81 aa		10.87	□□□□□ -0.67
SHOC2-205	ENST00000489390	PRKACB	P22694	351 aa		10.87	□□□□□ -0.67
SHOC2-205	ENST00000489390	CDK5	Q00535	292 aa		10.87	□□□□□ -0.67
SHOC2-205	ENST00000489390	OR2T5	Q6IEZ7	315 aa		10.87	□□□□□ -0.67
SHOC2-205	ENST00000489390	LINC00311	Q8N616	119 aa		10.87	□□□□□ -0.67
SHOC2-205	ENST00000489390	YIPF7	Q8N8F6	280 aa		10.87	□□□□□ -0.67
SHOC2-205	ENST00000489390	MINDY2	Q8NBR6	621 aa		10.87	□□□□□ -0.67
SHOC2-205	ENST00000489390	OR2T29	Q8NH02	315 aa		10.87	□□□□□ -0.67
SHOC2-205	ENST00000489390	CMTM5	Q96DZ9	223 aa		10.87	□□□□□ -0.67
SHOC2-205	ENST00000489390	LRGUK	Q96M69	825 aa		10.87	□□□□□ -0.67
SHOC2-205	ENST00000489390	MBOAT4	Q96T53	435 aa		10.87	□□□□□ -0.67
SHOC2-205	ENST00000489390	CNN2	Q99439	309 aa	Known RBP	10.87	□□□□□ -0.67
SHOC2-205	ENST00000489390	RSRP1	Q9BUV0	290 aa		10.87	□□□□□ -0.67
SHOC2-205	ENST00000489390	ZCCHC4	Q9H5U6	513 aa		10.87	□□□□□ -0.67
SHOC2-205	ENST00000489390	CEPT1	Q9Y6K0	416 aa		10.87	□□□□□ -0.67
SHOC2-205	ENST00000489390		H0Y980	276 aa		10.86	□□□□□ -0.67
SHOC2-205	ENST00000489390	TXNL1	O43396	289 aa		10.86	□□□□□ -0.67
SHOC2-205	ENST00000489390	HSPB1	P04792	205 aa	Known RBP	10.86	□□□□□ -0.67
SHOC2-205	ENST00000489390	SLC2A2	P11168	524 aa	Predicted RBP	10.86	□□□□□ -0.67
SHOC2-205	ENST00000489390	IL3RA	P26951	378 aa		10.86	□□□□□ -0.67
SHOC2-205	ENST00000489390	SSTR5	P35346	364 aa		10.86	□□□□□ -0.67
SHOC2-205	ENST00000489390	LINC00322	Q6ZN03	302 aa	Predicted RBP	10.86	□□□□□ -0.67
SHOC2-205	ENST00000489390	HDX	Q7Z353	690 aa		10.86	□□□□□ -0.67
SHOC2-205	ENST00000489390	GTSCR1	Q86UQ5	136 aa		10.86	□□□□□ -0.67
SHOC2-205	ENST00000489390	RPP25L	Q8N5L8	163 aa	Known RBP	10.86	□□□□□ -0.67
SHOC2-205	ENST00000489390	C8orf31	Q8N9H6	132 aa		10.86	□□□□□ -0.67
SHOC2-205	ENST00000489390	MRGPRD	Q8TDS7	321 aa		10.86	□□□□□ -0.67
SHOC2-205	ENST00000489390	NABP2	Q9BQ15	211 aa		10.86	□□□□□ -0.67
SHOC2-205	ENST00000489390	THAP7	Q9BT49	309 aa	Predicted RBP	10.86	□□□□□ -0.67
SHOC2-205	ENST00000489390	ADI1	Q9BV57	179 aa		10.86	□□□□□ -0.67
SHOC2-205	ENST00000489390	ST6GALNAC5	Q9BVH7	336 aa		10.86	□□□□□ -0.67
SHOC2-205	ENST00000489390	BARHL1	Q9BZE3	327 aa		10.86	□□□□□ -0.67
SHOC2-205	ENST00000489390	RPP14	O95059	124 aa	Known RBP	10.85	□□□□□ -0.67
SHOC2-205	ENST00000489390	ATF1	P18846	271 aa		10.85	□□□□□ -0.67
SHOC2-205	ENST00000489390	PAX5	Q02548	391 aa		10.85	□□□□□ -0.67
SHOC2-205	ENST00000489390	GK3P	Q14409	553 aa		10.85	□□□□□ -0.67
SHOC2-205	ENST00000489390	CDK5R1	Q15078	307 aa		10.85	□□□□□ -0.67
SHOC2-205	ENST00000489390	GIPC3	Q8TF64	312 aa		10.85	□□□□□ -0.67
SHOC2-205	ENST00000489390	SPSB1	Q96BD6	273 aa		10.85	□□□□□ -0.67
SHOC2-205	ENST00000489390	OPALIN	Q96PE5	141 aa		10.85	□□□□□ -0.67
SHOC2-205	ENST00000489390	PARP11	Q9NR21	331 aa		10.85	□□□□□ -0.67
SHOC2-205	ENST00000489390	IGHV7-81	A0A0B4J1V7	117 aa		10.84	□□□□□ -0.67
SHOC2-205	ENST00000489390	ZNF670-ZNF695	F2Z2N8	137 aa		10.84	□□□□□ -0.67
SHOC2-205	ENST00000489390	HSPB6	O14558	160 aa		10.84	□□□□□ -0.67
SHOC2-205	ENST00000489390	RGS11	O94810	467 aa		10.84	□□□□□ -0.67
SHOC2-205	ENST00000489390	HLA-DRB1	P01911	266 aa		10.84	□□□□□ -0.67
SHOC2-205	ENST00000489390	MMD	Q15546	238 aa		10.84	□□□□□ -0.67
SHOC2-205	ENST00000489390	PAN3	Q58A45	887 aa	Known RBP	10.84	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms