RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 SIGLEC5O15389 551 aa8.37□□□□□ -1.07
USP11-211ENST00000489111 TMPRSS2O15393 492 aa8.37□□□□□ -1.07
USP11-211ENST00000489111 PRAF2O60831 178 aa8.37□□□□□ -1.07
USP11-211ENST00000489111 PFDN1O60925 122 aa8.37□□□□□ -1.07
USP11-211ENST00000489111 TK1P04183 234 aa8.37□□□□□ -1.07
USP11-211ENST00000489111 GSTT2P0CG29 244 aa8.37□□□□□ -1.07
USP11-211ENST00000489111 DAOP14920 347 aa8.37□□□□□ -1.07
USP11-211ENST00000489111 PGAM2P15259 253 aa8.37□□□□□ -1.07
USP11-211ENST00000489111 RCC1P18754 421 aaPredicted RBP8.37□□□□□ -1.07
USP11-211ENST00000489111 ECI1P42126 302 aa8.37□□□□□ -1.07
USP11-211ENST00000489111 NPY4RP50391 375 aa8.37□□□□□ -1.07
USP11-211ENST00000489111 BCAP31P51572 246 aa8.37□□□□□ -1.07
USP11-211ENST00000489111 P2RX3P56373 397 aa8.37□□□□□ -1.07
USP11-211ENST00000489111 EDDM3BP56851 147 aa8.37□□□□□ -1.07
USP11-211ENST00000489111 HERV-K104P61576 105 aa8.37□□□□□ -1.07
USP11-211ENST00000489111 SEC61A1P61619 476 aaKnown RBP8.37□□□□□ -1.07
USP11-211ENST00000489111 MRPS11P82912 194 aaKnown RBP8.37□□□□□ -1.07
USP11-211ENST00000489111 SRSF1Q07955 248 aaKnown RBP eCLIP8.37□□□□□ -1.07
USP11-211ENST00000489111 AESQ08117 197 aa8.37□□□□□ -1.07
USP11-211ENST00000489111 ZNF880Q6PDB4 577 aa8.37□□□□□ -1.07
USP11-211ENST00000489111 TRAT1Q6PIZ9 186 aa8.37□□□□□ -1.07
USP11-211ENST00000489111 Q6ZPA2 131 aa8.37□□□□□ -1.07
USP11-211ENST00000489111 SLC36A1Q7Z2H8 476 aa8.37□□□□□ -1.07
USP11-211ENST00000489111 TMED4Q7Z7H5 227 aa8.37□□□□□ -1.07
USP11-211ENST00000489111 GAPTQ8N292 157 aa8.37□□□□□ -1.07
USP11-211ENST00000489111 FAM216BQ8N7L0 139 aa8.37□□□□□ -1.07
USP11-211ENST00000489111 ZDHHC22Q8N966 263 aa8.37□□□□□ -1.07
USP11-211ENST00000489111 ZNRF1Q8ND25 227 aa8.37□□□□□ -1.07
USP11-211ENST00000489111 TERB2Q8NHR7 220 aa8.37□□□□□ -1.07
USP11-211ENST00000489111 GIMAP1Q8WWP7 306 aa8.37□□□□□ -1.07
USP11-211ENST00000489111 TIMD4Q96H15 378 aa8.37□□□□□ -1.07
USP11-211ENST00000489111 COQ2Q96H96 371 aa8.37□□□□□ -1.07
USP11-211ENST00000489111 SCGB3A2Q96PL1 93 aa8.37□□□□□ -1.07
USP11-211ENST00000489111 ZNF2Q9BSG1 426 aaPredicted RBP8.37□□□□□ -1.07
USP11-211ENST00000489111 FAM234AQ9H0X4 552 aa8.37□□□□□ -1.07
USP11-211ENST00000489111 FLVCR2Q9UPI3 526 aa8.37□□□□□ -1.07
USP11-211ENST00000489111 ALG5Q9Y673 324 aa8.37□□□□□ -1.07
USP11-211ENST00000489111 TRAV39A0A0B4J263 110 aa8.36□□□□□ -1.07
USP11-211ENST00000489111 ODAMA1E959 279 aa8.36□□□□□ -1.07
USP11-211ENST00000489111 FAM172BPA6NC97 362 aa8.36□□□□□ -1.07
USP11-211ENST00000489111 LYNX1G3V0Z9 82 aa8.36□□□□□ -1.07
USP11-211ENST00000489111 ADAM20O43506 726 aa8.36□□□□□ -1.07
USP11-211ENST00000489111 NDUFA2O43678 99 aa8.36□□□□□ -1.07
USP11-211ENST00000489111 DIRAS3O95661 229 aa8.36□□□□□ -1.07
USP11-211ENST00000489111 CLDN1O95832 211 aa8.36□□□□□ -1.07
USP11-211ENST00000489111 LYNX1P0DP58 116 aa8.36□□□□□ -1.07
USP11-211ENST00000489111 ANXA7P20073 488 aaKnown RBP8.36□□□□□ -1.07
USP11-211ENST00000489111 FPR2P25090 351 aa8.36□□□□□ -1.07
USP11-211ENST00000489111 CDKN1AP38936 164 aa8.36□□□□□ -1.07
USP11-211ENST00000489111 GLIPR1P48060 266 aa8.36□□□□□ -1.07
USP11-211ENST00000489111 PAX5Q02548 391 aa8.36□□□□□ -1.07
USP11-211ENST00000489111 CARTPTQ16568 116 aa8.36□□□□□ -1.07
USP11-211ENST00000489111 ATPAF1Q5TC12 328 aaPredicted RBP8.36□□□□□ -1.07
USP11-211ENST00000489111 METTL11BQ5VVY1 283 aa8.36□□□□□ -1.07
USP11-211ENST00000489111 ZNF788Q6ZQV5 615 aa8.36□□□□□ -1.07
USP11-211ENST00000489111 MUC20Q8N307 709 aaPredicted RBP8.36□□□□□ -1.07
USP11-211ENST00000489111 PRR18Q8N4B5 295 aa8.36□□□□□ -1.07
USP11-211ENST00000489111 OR13C8Q8NGS7 320 aa8.36□□□□□ -1.07
USP11-211ENST00000489111 IL1F10Q8WWZ1 152 aa8.36□□□□□ -1.07
USP11-211ENST00000489111 RAB1CQ92928 201 aa8.36□□□□□ -1.07
USP11-211ENST00000489111 CABLES2Q9BTV7 478 aa8.36□□□□□ -1.07
USP11-211ENST00000489111 BEX2Q9BXY8 128 aa8.36□□□□□ -1.07
USP11-211ENST00000489111 SHARPINQ9H0F6 387 aa8.36□□□□□ -1.07
USP11-211ENST00000489111 BEX1Q9HBH7 125 aa8.36□□□□□ -1.07
USP11-211ENST00000489111 TAF9BQ9HBM6 251 aa8.36□□□□□ -1.07
USP11-211ENST00000489111 GPN1Q9HCN4 374 aaPredicted RBP8.36□□□□□ -1.07
USP11-211ENST00000489111 RAB9BQ9NP90 201 aa8.36□□□□□ -1.07
USP11-211ENST00000489111 MBNL3Q9NUK0 354 aaKnown RBP8.36□□□□□ -1.07
USP11-211ENST00000489111 MAB21L2Q9Y586 359 aa8.36□□□□□ -1.07
USP11-211ENST00000489111 RELNP78509 3460 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 TRGV10A0A0A0MS01 117 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 A0A0B4J293 547 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 CLEC18AA5D8T8 446 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 SPINT2O43291 252 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 HSPA12AO43301 675 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 PPIHO43447 177 aaKnown RBP8.35□□□□□ -1.07
USP11-211ENST00000489111 NDUFB3O43676 98 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 RP2O75695 350 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 SCTP09683 121 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 ZNF728P0DKX0 622 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 SELLP14151 372 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 NDUFB7P17568 137 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 COL8A2P25067 703 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 IL2RGP31785 369 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 FCGR2CP31995 323 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 EFNA4P52798 201 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 TAS2R31P59538 309 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 FXYD4P59646 89 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 CBX3Q13185 183 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 SURF2Q15527 256 aaPredicted RBP8.35□□□□□ -1.07
USP11-211ENST00000489111 HMGN3Q15651 99 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 C4orf46Q504U0 113 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 LRRC10Q5BKY1 277 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 IGSF11Q5DX21 431 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 CLEC18BQ6UXF7 455 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 ZNF554Q86TJ5 538 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 CADM3Q8N126 398 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 TPRX1Q8N7U7 411 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 CLEC18CQ8NCF0 446 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 OR10J5Q8NHC4 309 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms