RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 ARL6IP5O75915 188 aa11.58□□□□□ -0.56
BRCA1-218ENST00000489037 CPEP16870 476 aa11.58□□□□□ -0.56
BRCA1-218ENST00000489037 GZMHP20718 246 aa11.58□□□□□ -0.56
BRCA1-218ENST00000489037 NFYBP25208 207 aa11.58□□□□□ -0.56
BRCA1-218ENST00000489037 MAP2K4P45985 399 aa11.58□□□□□ -0.56
BRCA1-218ENST00000489037 ARHGDIBP52566 201 aa11.58□□□□□ -0.56
BRCA1-218ENST00000489037 GABARAPL2P60520 117 aa11.58□□□□□ -0.56
BRCA1-218ENST00000489037 PAX5Q02548 391 aa11.58□□□□□ -0.56
BRCA1-218ENST00000489037 INSL4Q14641 139 aa11.58□□□□□ -0.56
BRCA1-218ENST00000489037 TBCEQ15813 527 aaPredicted RBP11.58□□□□□ -0.56
BRCA1-218ENST00000489037 RSBN1Q5VWQ0 802 aaPredicted RBP11.58□□□□□ -0.56
BRCA1-218ENST00000489037 OLFML2AQ68BL7 652 aa11.58□□□□□ -0.56
BRCA1-218ENST00000489037 SLC35E4Q6ICL7 350 aa11.58□□□□□ -0.56
BRCA1-218ENST00000489037 LIAT1Q6ZQX7 453 aa11.58□□□□□ -0.56
BRCA1-218ENST00000489037 ZNF367Q7RTV3 350 aa11.58□□□□□ -0.56
BRCA1-218ENST00000489037 SVOPQ8N4V2 548 aa11.58□□□□□ -0.56
BRCA1-218ENST00000489037 TAF15Q92804 592 aaKnown RBP eCLIP11.58□□□□□ -0.566e-6■□□□□ 11.2
BRCA1-218ENST00000489037 AJUBAQ96IF1 538 aa11.58□□□□□ -0.56
BRCA1-218ENST00000489037 SELENOIQ9C0D9 397 aa11.58□□□□□ -0.56
BRCA1-218ENST00000489037 PITPNC1Q9UKF7 332 aa11.58□□□□□ -0.56
BRCA1-218ENST00000489037 FAM90A10PA6NDY2 464 aa11.57□□□□□ -0.56
BRCA1-218ENST00000489037 FAM90A18PA6NE21 464 aa11.57□□□□□ -0.56
BRCA1-218ENST00000489037 FAM90A16PA6NEW6 464 aa11.57□□□□□ -0.56
BRCA1-218ENST00000489037 FAM90A20PA6NIJ5 464 aa11.57□□□□□ -0.56
BRCA1-218ENST00000489037 FAM90A7PA6NKC0 464 aa11.57□□□□□ -0.56
BRCA1-218ENST00000489037 FAM90A22PA8MWA6 464 aa11.57□□□□□ -0.56
BRCA1-218ENST00000489037 FAM90A12PA8MX19 464 aa11.57□□□□□ -0.56
BRCA1-218ENST00000489037 FAM90A5PA8MXJ8 464 aa11.57□□□□□ -0.56
BRCA1-218ENST00000489037 FAM90A23PA8MXZ1 464 aa11.57□□□□□ -0.56
BRCA1-218ENST00000489037 MMP23AO75900 390 aa11.57□□□□□ -0.56
BRCA1-218ENST00000489037 UCHL1P09936 223 aa11.57□□□□□ -0.56
BRCA1-218ENST00000489037 FAM90A15PP0C7V4 464 aa11.57□□□□□ -0.56
BRCA1-218ENST00000489037 FAM90A13PP0C7W8 464 aa11.57□□□□□ -0.56
BRCA1-218ENST00000489037 FAM90A14PP0C7W9 464 aa11.57□□□□□ -0.56
BRCA1-218ENST00000489037 FAM90A24PP0C7X0 464 aa11.57□□□□□ -0.56
BRCA1-218ENST00000489037 MGMTP16455 207 aa11.57□□□□□ -0.56
BRCA1-218ENST00000489037 CEACAM3P40198 252 aa11.57□□□□□ -0.56
BRCA1-218ENST00000489037 PLA1AQ53H76 456 aa11.57□□□□□ -0.56
BRCA1-218ENST00000489037 FAM27D1Q5T7N8 215 aa11.57□□□□□ -0.56
BRCA1-218ENST00000489037 OR13A1Q8NGR1 328 aa11.57□□□□□ -0.56
BRCA1-218ENST00000489037 SGMS2Q8NHU3 365 aa11.57□□□□□ -0.56
BRCA1-218ENST00000489037 PLPPR1Q8TBJ4 325 aa11.57□□□□□ -0.56
BRCA1-218ENST00000489037 MRGPRDQ8TDS7 321 aa11.57□□□□□ -0.56
BRCA1-218ENST00000489037 YTHDF1Q9BYJ9 559 aaKnown RBP11.57□□□□□ -0.56
BRCA1-218ENST00000489037 BANF2Q9H503 90 aa11.57□□□□□ -0.56
BRCA1-218ENST00000489037 RAB9BQ9NP90 201 aa11.57□□□□□ -0.56
BRCA1-218ENST00000489037 ACOT13Q9NPJ3 140 aa11.57□□□□□ -0.56
BRCA1-218ENST00000489037 CALYQ9NYX4 217 aa11.57□□□□□ -0.56
BRCA1-218ENST00000489037 IDI2-AS1Q9NZ38 188 aa11.57□□□□□ -0.56
BRCA1-218ENST00000489037 DPM3Q9P2X0 92 aa11.57□□□□□ -0.56
BRCA1-218ENST00000489037 RRP15Q9Y3B9 282 aaKnown RBP11.57□□□□□ -0.56
BRCA1-218ENST00000489037 RNF114Q9Y508 228 aa11.57□□□□□ -0.56
BRCA1-218ENST00000489037 HILPDAQ9Y5L2 63 aa11.57□□□□□ -0.56
BRCA1-218ENST00000489037 VGLL3A8MV65 326 aa11.56□□□□□ -0.56
BRCA1-218ENST00000489037 LEUTXA8MZ59 168 aa11.56□□□□□ -0.56
BRCA1-218ENST00000489037 F2RL2O00254 374 aa11.56□□□□□ -0.56
BRCA1-218ENST00000489037 DENRO43583 198 aaKnown RBP11.56□□□□□ -0.56
BRCA1-218ENST00000489037 SC5DO75845 299 aa11.56□□□□□ -0.56
BRCA1-218ENST00000489037 IL1AP01583 271 aa11.56□□□□□ -0.56
BRCA1-218ENST00000489037 PAX6P26367 422 aa11.56□□□□□ -0.56
BRCA1-218ENST00000489037 CD34P28906 385 aa11.56□□□□□ -0.56
BRCA1-218ENST00000489037 GABRA5P31644 462 aa11.56□□□□□ -0.56
BRCA1-218ENST00000489037 RPS25P62851 125 aaKnown RBP11.56□□□□□ -0.56
BRCA1-218ENST00000489037 RELBQ01201 579 aa11.56□□□□□ -0.56
BRCA1-218ENST00000489037 C17orf58Q2M2W7 97 aa11.56□□□□□ -0.56
BRCA1-218ENST00000489037 RAB12Q6IQ22 244 aa11.56□□□□□ -0.56
BRCA1-218ENST00000489037 LRRTM1Q86UE6 522 aa11.56□□□□□ -0.56
BRCA1-218ENST00000489037 OR10A7Q8NGE5 316 aa11.56□□□□□ -0.56
BRCA1-218ENST00000489037 OR9G1Q8NH87 305 aa11.56□□□□□ -0.56
BRCA1-218ENST00000489037 PEX16Q9Y5Y5 336 aa11.56□□□□□ -0.56
BRCA1-218ENST00000489037 ANK2Q01484 3957 aa11.56□□□□□ -0.56
BRCA1-218ENST00000489037 TENM1Q9UKZ4 2725 aa11.55□□□□□ -0.56
BRCA1-218ENST00000489037 FAM172BPA6NC97 362 aa11.55□□□□□ -0.56
BRCA1-218ENST00000489037 AIPO00170 330 aa11.55□□□□□ -0.56
BRCA1-218ENST00000489037 MPIG6BO95866 241 aa11.55□□□□□ -0.56
BRCA1-218ENST00000489037 GLAP06280 429 aa11.55□□□□□ -0.56
BRCA1-218ENST00000489037 FUT3P21217 361 aa11.55□□□□□ -0.56
BRCA1-218ENST00000489037 HTR2CP28335 458 aa11.55□□□□□ -0.56
BRCA1-218ENST00000489037 BRS3P32247 399 aa11.55□□□□□ -0.56
BRCA1-218ENST00000489037 PSMD7P51665 324 aa11.55□□□□□ -0.56
BRCA1-218ENST00000489037 LTC4SQ16873 150 aa11.55□□□□□ -0.56
BRCA1-218ENST00000489037 C1orf100Q5SVJ3 147 aa11.55□□□□□ -0.56
BRCA1-218ENST00000489037 BRICD5Q6PL45 260 aa11.55□□□□□ -0.56
BRCA1-218ENST00000489037 Q6ZSV7 163 aa11.55□□□□□ -0.56
BRCA1-218ENST00000489037 LYPD6Q86Y78 171 aa11.55□□□□□ -0.56
BRCA1-218ENST00000489037 OR4C13Q8NGP0 309 aa11.55□□□□□ -0.56
BRCA1-218ENST00000489037 RFESDQ8TAC1 157 aa11.55□□□□□ -0.56
BRCA1-218ENST00000489037 KCNG3Q8TAE7 436 aa11.55□□□□□ -0.56
BRCA1-218ENST00000489037 FAM46BQ96A09 425 aa11.55□□□□□ -0.56
BRCA1-218ENST00000489037 KIRREL1Q96J84 757 aa11.55□□□□□ -0.56
BRCA1-218ENST00000489037 NEDD4LQ96PU5 975 aa11.55□□□□□ -0.56
BRCA1-218ENST00000489037 NPFFR1Q9GZQ6 430 aa11.55□□□□□ -0.56
BRCA1-218ENST00000489037 C16orf95Q9H693 158 aa11.55□□□□□ -0.56
BRCA1-218ENST00000489037 PLGRKTQ9HBL7 147 aa11.55□□□□□ -0.56
BRCA1-218ENST00000489037 ZNF286AQ9HBT8 521 aa11.55□□□□□ -0.56
BRCA1-218ENST00000489037 ETAA1Q9NY74 926 aa11.55□□□□□ -0.56
BRCA1-218ENST00000489037 TRAPPC2LQ9UL33 140 aa11.55□□□□□ -0.56
BRCA1-218ENST00000489037 AMMECR1Q9Y4X0 333 aaPredicted RBP11.55□□□□□ -0.56
BRCA1-218ENST00000489037 A0A087X0M5 115 aa11.54□□□□□ -0.56
BRCA1-218ENST00000489037 A0A1B0GX30 115 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms