RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 GLP1RP43220 463 aa10.84□□□□□ -0.67
CLIC4-202ENST00000488683 PMP22Q01453 160 aa10.84□□□□□ -0.67
CLIC4-202ENST00000488683 EWSR1Q01844 656 aaKnown RBP eCLIP10.84□□□□□ -0.676e-10■■■■■ 36.9
CLIC4-202ENST00000488683 PEA15Q15121 130 aa10.84□□□□□ -0.67
CLIC4-202ENST00000488683 AWAT1Q58HT5 328 aa10.84□□□□□ -0.67
CLIC4-202ENST00000488683 KRBOX4Q5JUW0 171 aa10.84□□□□□ -0.67
CLIC4-202ENST00000488683 LILRB1Q8NHL6 650 aaPredicted RBP10.84□□□□□ -0.67
CLIC4-202ENST00000488683 LYPD6BQ8NI32 183 aa10.84□□□□□ -0.67
CLIC4-202ENST00000488683 SPRY4Q9C004 299 aa10.84□□□□□ -0.67
CLIC4-202ENST00000488683 ARV1Q9H2C2 271 aa10.84□□□□□ -0.67
CLIC4-202ENST00000488683 CACFD1Q9UGQ2 172 aa10.84□□□□□ -0.67
CLIC4-202ENST00000488683 BOKQ9UMX3 212 aaPredicted RBP10.84□□□□□ -0.67
CLIC4-202ENST00000488683 CHD3Q12873 2000 aaKnown RBP10.84□□□□□ -0.67
CLIC4-202ENST00000488683 hCG_1809904A0A1W2PP81 198 aa10.84□□□□□ -0.67
CLIC4-202ENST00000488683 A0A1W2PPH5 198 aa10.84□□□□□ -0.67
CLIC4-202ENST00000488683 A0A1W2PR64 198 aa10.84□□□□□ -0.67
CLIC4-202ENST00000488683 A0A1W2PRV1 198 aa10.84□□□□□ -0.67
CLIC4-202ENST00000488683 ZNF724A8MTY0 619 aa10.84□□□□□ -0.67
CLIC4-202ENST00000488683 RPL36A-HNRNPH2H7BZ11 118 aa10.84□□□□□ -0.67
CLIC4-202ENST00000488683 CEBPDP49716 269 aaPredicted RBP10.84□□□□□ -0.67
CLIC4-202ENST00000488683 UCP3P55916 312 aa10.84□□□□□ -0.67
CLIC4-202ENST00000488683 PLGLB1Q02325 96 aa10.84□□□□□ -0.67
CLIC4-202ENST00000488683 GUK1Q16774 197 aa10.84□□□□□ -0.67
CLIC4-202ENST00000488683 ZNF695Q8IW36 515 aa10.84□□□□□ -0.67
CLIC4-202ENST00000488683 ODF3L1Q8IXM7 274 aa10.84□□□□□ -0.67
CLIC4-202ENST00000488683 LGI3Q8N145 548 aa10.84□□□□□ -0.67
CLIC4-202ENST00000488683 OR4D5Q8NGN0 318 aa10.84□□□□□ -0.67
CLIC4-202ENST00000488683 ZFP57Q9NU63 452 aa10.84□□□□□ -0.67
CLIC4-202ENST00000488683 OR1A1Q9P1Q5 309 aa10.84□□□□□ -0.67
CLIC4-202ENST00000488683 A0A1W2PPE2 198 aa10.83□□□□□ -0.68
CLIC4-202ENST00000488683 LNP1A1A4G5 178 aa10.83□□□□□ -0.68
CLIC4-202ENST00000488683 SLC22A20A6NK97 555 aa10.83□□□□□ -0.68
CLIC4-202ENST00000488683 COLCA2A8K830 154 aa10.83□□□□□ -0.68
CLIC4-202ENST00000488683 ST8SIA3O43173 380 aa10.83□□□□□ -0.68
CLIC4-202ENST00000488683 GLAP06280 429 aa10.83□□□□□ -0.68
CLIC4-202ENST00000488683 SNCAP37840 140 aa10.83□□□□□ -0.68
CLIC4-202ENST00000488683 WNT5AP41221 380 aa10.83□□□□□ -0.68
CLIC4-202ENST00000488683 RAB13P51153 203 aa10.83□□□□□ -0.68
CLIC4-202ENST00000488683 SNRPEP62304 92 aaKnown RBP10.83□□□□□ -0.68
CLIC4-202ENST00000488683 FLI1Q01543 452 aaPredicted RBP10.83□□□□□ -0.68
CLIC4-202ENST00000488683 ZNF154Q13106 437 aa10.83□□□□□ -0.68
CLIC4-202ENST00000488683 ALKBH6Q3KRA9 238 aa10.83□□□□□ -0.68
CLIC4-202ENST00000488683 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.83□□□□□ -0.68
CLIC4-202ENST00000488683 TMEM251Q8N6I4 163 aa10.83□□□□□ -0.68
CLIC4-202ENST00000488683 SCRT1Q9BWW7 348 aa10.83□□□□□ -0.68
CLIC4-202ENST00000488683 C19orf12Q9NSK7 152 aa10.83□□□□□ -0.68
CLIC4-202ENST00000488683 GPR137BO60478 399 aa10.83□□□□□ -0.68
CLIC4-202ENST00000488683 ZNF44P15621 663 aa10.83□□□□□ -0.68
CLIC4-202ENST00000488683 SRSF6Q13247 344 aaKnown RBP10.83□□□□□ -0.68
CLIC4-202ENST00000488683 DHRS13Q6UX07 377 aa10.83□□□□□ -0.68
CLIC4-202ENST00000488683 RBMS3Q6XE24 437 aaKnown RBP10.83□□□□□ -0.68
CLIC4-202ENST00000488683 DPPA2Q7Z7J5 298 aa10.83□□□□□ -0.68
CLIC4-202ENST00000488683 CXorf67Q86X51 503 aaPredicted RBP10.83□□□□□ -0.68
CLIC4-202ENST00000488683 Q8NFD4 153 aa10.83□□□□□ -0.68
CLIC4-202ENST00000488683 SYT3Q9BQG1 590 aa10.83□□□□□ -0.68
CLIC4-202ENST00000488683 CEP250Q9BV73 2442 aa10.83□□□□□ -0.68
CLIC4-202ENST00000488683 ZNF16P17020 682 aaPredicted RBP10.82□□□□□ -0.68
CLIC4-202ENST00000488683 P2RY1P47900 373 aa10.82□□□□□ -0.68
CLIC4-202ENST00000488683 RPS16P62249 146 aaKnown RBP10.82□□□□□ -0.68
CLIC4-202ENST00000488683 TMEM267Q0VDI3 215 aaPredicted RBP10.82□□□□□ -0.68
CLIC4-202ENST00000488683 HAGHQ16775 308 aa10.82□□□□□ -0.68
CLIC4-202ENST00000488683 ABHD17BQ5VST6 288 aa10.82□□□□□ -0.68
CLIC4-202ENST00000488683 SELENOHQ8IZQ5 122 aaKnown RBP10.82□□□□□ -0.68
CLIC4-202ENST00000488683 GCNT2Q8N0V5 402 aa10.82□□□□□ -0.68
CLIC4-202ENST00000488683 TECTBQ96PL2 329 aa10.82□□□□□ -0.68
CLIC4-202ENST00000488683 FAM173AQ9BQD7 235 aa10.82□□□□□ -0.68
CLIC4-202ENST00000488683 Q9N2K0 584 aa10.82□□□□□ -0.68
CLIC4-202ENST00000488683 NAPSAO96009 420 aa10.82□□□□□ -0.68
CLIC4-202ENST00000488683 DANCRP0C864 163 aa10.82□□□□□ -0.68
CLIC4-202ENST00000488683 DVL1P1P54792 670 aaPredicted RBP10.82□□□□□ -0.68
CLIC4-202ENST00000488683 ZDHHC23Q8IYP9 409 aa10.82□□□□□ -0.68
CLIC4-202ENST00000488683 ZNF565Q8N9K5 539 aa10.82□□□□□ -0.68
CLIC4-202ENST00000488683 SUMF2Q8NBJ7 301 aa10.82□□□□□ -0.68
CLIC4-202ENST00000488683 OR5C1Q8NGR4 320 aa10.82□□□□□ -0.68
CLIC4-202ENST00000488683 BOD1Q96IK1 185 aa10.82□□□□□ -0.68
CLIC4-202ENST00000488683 TAAR9Q96RI9 348 aa10.82□□□□□ -0.68
CLIC4-202ENST00000488683 GINS3Q9BRX5 216 aa10.82□□□□□ -0.68
CLIC4-202ENST00000488683 LINC00470Q9BZP3 86 aa10.82□□□□□ -0.68
CLIC4-202ENST00000488683 TMEM222Q9H0R3 208 aa10.82□□□□□ -0.68
CLIC4-202ENST00000488683 PUS1Q9Y606 427 aaKnown RBP eCLIP10.82□□□□□ -0.68
CLIC4-202ENST00000488683 PCNX2A6NKB5 2137 aa10.82□□□□□ -0.68
CLIC4-202ENST00000488683 ZNF727A8MUV8 499 aa10.81□□□□□ -0.68
CLIC4-202ENST00000488683 SIRPB1O00241 398 aa10.81□□□□□ -0.68
CLIC4-202ENST00000488683 ATP6V0CP27449 155 aa10.81□□□□□ -0.68
CLIC4-202ENST00000488683 DYNLT3P51808 116 aa10.81□□□□□ -0.68
CLIC4-202ENST00000488683 OR2B8PP59922 312 aa10.81□□□□□ -0.68
CLIC4-202ENST00000488683 FGF12P61328 243 aa10.81□□□□□ -0.68
CLIC4-202ENST00000488683 CEACAM21Q3KPI0 293 aa10.81□□□□□ -0.68
CLIC4-202ENST00000488683 NRN1LQ496H8 165 aa10.81□□□□□ -0.68
CLIC4-202ENST00000488683 RNFT1Q5M7Z0 435 aa10.81□□□□□ -0.68
CLIC4-202ENST00000488683 DEFB123Q8N688 67 aa10.81□□□□□ -0.68
CLIC4-202ENST00000488683 CCDC71LQ8N9Z2 235 aa10.81□□□□□ -0.68
CLIC4-202ENST00000488683 OR1K1Q8NGR3 316 aa10.81□□□□□ -0.68
CLIC4-202ENST00000488683 BCL2L14Q9BZR8 327 aa10.81□□□□□ -0.68
CLIC4-202ENST00000488683 C11orf1Q9H5F2 150 aa10.81□□□□□ -0.68
CLIC4-202ENST00000488683 FAM212BQ9NTI7 297 aaPredicted RBP10.81□□□□□ -0.68
CLIC4-202ENST00000488683 C7orf77A4D0Y5 90 aa10.81□□□□□ -0.68
CLIC4-202ENST00000488683 TRDCB7Z8K6 153 aa10.81□□□□□ -0.68
CLIC4-202ENST00000488683 TRAPPC2LH3BP13 241 aa10.81□□□□□ -0.68
CLIC4-202ENST00000488683 MPLP40238 635 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms