RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 SSX2Q16385 188 aa12.88□□□□□ -0.35
CTDSP1-209ENST00000488627 C1orf100Q5SVJ3 147 aa12.88□□□□□ -0.35
CTDSP1-209ENST00000488627 OLFML2AQ68BL7 652 aa12.88□□□□□ -0.35
CTDSP1-209ENST00000488627 SLC35E4Q6ICL7 350 aa12.88□□□□□ -0.35
CTDSP1-209ENST00000488627 OR52W1Q6IF63 320 aa12.88□□□□□ -0.35
CTDSP1-209ENST00000488627 BRICD5Q6PL45 260 aa12.88□□□□□ -0.35
CTDSP1-209ENST00000488627 SHISA2Q6UWI4 295 aa12.88□□□□□ -0.35
CTDSP1-209ENST00000488627 ZNF565Q8N9K5 539 aa12.88□□□□□ -0.35
CTDSP1-209ENST00000488627 UFD1Q92890 307 aa12.88□□□□□ -0.35
CTDSP1-209ENST00000488627 MGLLQ99685 303 aa12.88□□□□□ -0.35
CTDSP1-209ENST00000488627 SLITRK2Q9H156 845 aa12.88□□□□□ -0.35
CTDSP1-209ENST00000488627 C16orf95Q9H693 158 aa12.88□□□□□ -0.35
CTDSP1-209ENST00000488627 RCC2Q9P258 522 aaKnown RBP12.88□□□□□ -0.35
CTDSP1-209ENST00000488627 DSCAML1Q8TD84 2053 aa12.88□□□□□ -0.35
CTDSP1-209ENST00000488627 TRAV39A0A0B4J263 110 aa12.87□□□□□ -0.35
CTDSP1-209ENST00000488627 NPIPB11E5RHQ5 1161 aa12.87□□□□□ -0.35
CTDSP1-209ENST00000488627 HSMCR30P0CW71 290 aa12.87□□□□□ -0.35
CTDSP1-209ENST00000488627 JUNBP17275 347 aaPredicted RBP12.87□□□□□ -0.35
CTDSP1-209ENST00000488627 RPS25P62851 125 aaKnown RBP12.87□□□□□ -0.35
CTDSP1-209ENST00000488627 TBCEQ15813 527 aaPredicted RBP12.87□□□□□ -0.35
CTDSP1-209ENST00000488627 LY6EQ16553 131 aa12.87□□□□□ -0.35
CTDSP1-209ENST00000488627 AWAT2Q6E213 333 aa12.87□□□□□ -0.35
CTDSP1-209ENST00000488627 CCBE1Q6UXH8 406 aaPredicted RBP12.87□□□□□ -0.35
CTDSP1-209ENST00000488627 RTN4RL2Q86UN3 420 aa12.87□□□□□ -0.35
CTDSP1-209ENST00000488627 FOXRED1Q96CU9 486 aaPredicted RBP12.87□□□□□ -0.35
CTDSP1-209ENST00000488627 KIRREL1Q96J84 757 aa12.87□□□□□ -0.35
CTDSP1-209ENST00000488627 BANF2Q9H503 90 aa12.87□□□□□ -0.35
CTDSP1-209ENST00000488627 ZNF286AQ9HBT8 521 aa12.87□□□□□ -0.35
CTDSP1-209ENST00000488627 TCF7L1Q9HCS4 588 aa12.87□□□□□ -0.35
CTDSP1-209ENST00000488627 MGMTP16455 207 aa12.86□□□□□ -0.35
CTDSP1-209ENST00000488627 GLP1RP43220 463 aa12.86□□□□□ -0.35
CTDSP1-209ENST00000488627 DYNLT3P51808 116 aa12.86□□□□□ -0.35
CTDSP1-209ENST00000488627 KRTAP10-3P60369 221 aa12.86□□□□□ -0.35
CTDSP1-209ENST00000488627 SRSF4Q08170 494 aaKnown RBP12.86□□□□□ -0.35
CTDSP1-209ENST00000488627 HSD17B12Q53GQ0 312 aa12.86□□□□□ -0.35
CTDSP1-209ENST00000488627 PLA1AQ53H76 456 aa12.86□□□□□ -0.35
CTDSP1-209ENST00000488627 SIGIRRQ6IA17 410 aa12.86□□□□□ -0.35
CTDSP1-209ENST00000488627 DHRS7BQ6IAN0 325 aaPredicted RBP12.86□□□□□ -0.35
CTDSP1-209ENST00000488627 MRGPRDQ8TDS7 321 aa12.86□□□□□ -0.35
CTDSP1-209ENST00000488627 WFDC12Q8WWY7 111 aa12.86□□□□□ -0.35
CTDSP1-209ENST00000488627 CYYR1Q96J86 154 aa12.86□□□□□ -0.35
CTDSP1-209ENST00000488627 Q96M66 194 aa12.86□□□□□ -0.35
CTDSP1-209ENST00000488627 GFI1Q99684 422 aa12.86□□□□□ -0.35
CTDSP1-209ENST00000488627 ACOT13Q9NPJ3 140 aa12.86□□□□□ -0.35
CTDSP1-209ENST00000488627 CALYQ9NYX4 217 aa12.86□□□□□ -0.35
CTDSP1-209ENST00000488627 GHRLQ9UBU3 117 aa12.86□□□□□ -0.35
CTDSP1-209ENST00000488627 BLOC1S6Q9UL45 172 aa12.86□□□□□ -0.35
CTDSP1-209ENST00000488627 HILPDAQ9Y5L2 63 aa12.86□□□□□ -0.35
CTDSP1-209ENST00000488627 KIAA2026Q5HYC2 2103 aa12.85□□□□□ -0.35
CTDSP1-209ENST00000488627 FAM172BPA6NC97 362 aa12.85□□□□□ -0.35
CTDSP1-209ENST00000488627 A6NDX4 124 aa12.85□□□□□ -0.35
CTDSP1-209ENST00000488627 FAM90A22PA8MWA6 464 aa12.85□□□□□ -0.35
CTDSP1-209ENST00000488627 LY6LH3BQJ8 138 aa12.85□□□□□ -0.35
CTDSP1-209ENST00000488627 CHST1O43916 411 aa12.85□□□□□ -0.35
CTDSP1-209ENST00000488627 IL1AP01583 271 aa12.85□□□□□ -0.35
CTDSP1-209ENST00000488627 MT-ND4P03905 459 aa12.85□□□□□ -0.35
CTDSP1-209ENST00000488627 HTR1DP28221 377 aa12.85□□□□□ -0.35
CTDSP1-209ENST00000488627 PROK1P58294 105 aa12.85□□□□□ -0.35
CTDSP1-209ENST00000488627 EMX1Q04741 257 aaPredicted RBP12.85□□□□□ -0.35
CTDSP1-209ENST00000488627 FAM189A2Q15884 450 aa12.85□□□□□ -0.35
CTDSP1-209ENST00000488627 SSX1Q16384 188 aa12.85□□□□□ -0.35
CTDSP1-209ENST00000488627 ATAD3CQ5T2N8 411 aa12.85□□□□□ -0.35
CTDSP1-209ENST00000488627 ZNF497Q6ZNH5 498 aa12.85□□□□□ -0.35
CTDSP1-209ENST00000488627 RFESDQ8TAC1 157 aa12.85□□□□□ -0.35
CTDSP1-209ENST00000488627 ZNF596Q8TC21 504 aa12.85□□□□□ -0.35
CTDSP1-209ENST00000488627 SELENOIQ9C0D9 397 aa12.85□□□□□ -0.35
CTDSP1-209ENST00000488627 DPM3Q9P2X0 92 aa12.85□□□□□ -0.35
CTDSP1-209ENST00000488627 RNF114Q9Y508 228 aa12.85□□□□□ -0.35
CTDSP1-209ENST00000488627 TMEM30CPA0ZSE6 113 aa12.84□□□□□ -0.35
CTDSP1-209ENST00000488627 FAM90A10PA6NDY2 464 aa12.84□□□□□ -0.35
CTDSP1-209ENST00000488627 FAM90A18PA6NE21 464 aa12.84□□□□□ -0.35
CTDSP1-209ENST00000488627 FAM90A16PA6NEW6 464 aa12.84□□□□□ -0.35
CTDSP1-209ENST00000488627 FAM90A20PA6NIJ5 464 aa12.84□□□□□ -0.35
CTDSP1-209ENST00000488627 FAM90A7PA6NKC0 464 aa12.84□□□□□ -0.35
CTDSP1-209ENST00000488627 FAM90A12PA8MX19 464 aa12.84□□□□□ -0.35
CTDSP1-209ENST00000488627 FAM90A5PA8MXJ8 464 aa12.84□□□□□ -0.35
CTDSP1-209ENST00000488627 FAM90A23PA8MXZ1 464 aa12.84□□□□□ -0.35
CTDSP1-209ENST00000488627 C15orf65H3BRN8 121 aa12.84□□□□□ -0.35
CTDSP1-209ENST00000488627 SLC22A1O15245 554 aa12.84□□□□□ -0.35
CTDSP1-209ENST00000488627 FAM90A15PP0C7V4 464 aa12.84□□□□□ -0.35
CTDSP1-209ENST00000488627 FAM90A13PP0C7W8 464 aa12.84□□□□□ -0.35
CTDSP1-209ENST00000488627 FAM90A14PP0C7W9 464 aa12.84□□□□□ -0.35
CTDSP1-209ENST00000488627 FAM90A24PP0C7X0 464 aa12.84□□□□□ -0.35
CTDSP1-209ENST00000488627 VSIG8P0DPA2 414 aa12.84□□□□□ -0.35
CTDSP1-209ENST00000488627 GZMHP20718 246 aa12.84□□□□□ -0.35
CTDSP1-209ENST00000488627 PSMA1P25786 263 aaKnown RBP12.84□□□□□ -0.35
CTDSP1-209ENST00000488627 SSTR5P35346 364 aa12.84□□□□□ -0.35
CTDSP1-209ENST00000488627 QRFPP83859 136 aa12.84□□□□□ -0.35
CTDSP1-209ENST00000488627 FABP5Q01469 135 aa12.84□□□□□ -0.35
CTDSP1-209ENST00000488627 TRAM1Q15629 374 aa12.84□□□□□ -0.35
CTDSP1-209ENST00000488627 HLA-DRB5Q30154 266 aa12.84□□□□□ -0.35
CTDSP1-209ENST00000488627 GLT8D1Q68CQ7 371 aa12.84□□□□□ -0.35
CTDSP1-209ENST00000488627 ZNF367Q7RTV3 350 aa12.84□□□□□ -0.35
CTDSP1-209ENST00000488627 GAPTQ8N292 157 aa12.84□□□□□ -0.35
CTDSP1-209ENST00000488627 SGMS2Q8NHU3 365 aa12.84□□□□□ -0.35
CTDSP1-209ENST00000488627 NDNFQ8TB73 568 aa12.84□□□□□ -0.35
CTDSP1-209ENST00000488627 SPACA1Q9HBV2 294 aa12.84□□□□□ -0.35
CTDSP1-209ENST00000488627 IDI2-AS1Q9NZ38 188 aa12.84□□□□□ -0.35
CTDSP1-209ENST00000488627 TCF19Q9Y242 345 aa12.84□□□□□ -0.35
CTDSP1-209ENST00000488627 BUB1B-PAK6H3BSN5 160 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms