RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 A0A0A6YYD4 124 aa8.5□□□□□ -1.05
SKA1-204ENST00000488454 A0A0A6YYH2 397 aa8.5□□□□□ -1.05
SKA1-204ENST00000488454 TMEM238LA0A1B0GVL6 79 aa8.5□□□□□ -1.05
SKA1-204ENST00000488454 TMEM30CPA0ZSE6 113 aa8.5□□□□□ -1.05
SKA1-204ENST00000488454 A6NJ64 397 aa8.5□□□□□ -1.05
SKA1-204ENST00000488454 C22orf46C9J442 243 aa8.5□□□□□ -1.05
SKA1-204ENST00000488454 J3QLI3 93 aa8.5□□□□□ -1.05
SKA1-204ENST00000488454 RGS5O15539 181 aa8.5□□□□□ -1.05
SKA1-204ENST00000488454 CA11O75493 328 aa8.5□□□□□ -1.05
SKA1-204ENST00000488454 FCN3O75636 299 aa8.5□□□□□ -1.05
SKA1-204ENST00000488454 LY6G6DO95868 133 aa8.5□□□□□ -1.05
SKA1-204ENST00000488454 CHATP28329 748 aa8.5□□□□□ -1.05
SKA1-204ENST00000488454 GLIPR1P48060 266 aa8.5□□□□□ -1.05
SKA1-204ENST00000488454 ARF6P62330 175 aa8.5□□□□□ -1.05
SKA1-204ENST00000488454 UBE2NLQ5JXB2 153 aa8.5□□□□□ -1.05
SKA1-204ENST00000488454 METTL11BQ5VVY1 283 aa8.5□□□□□ -1.05
SKA1-204ENST00000488454 TMEM200BQ69YZ2 307 aa8.5□□□□□ -1.05
SKA1-204ENST00000488454 SIGIRRQ6IA17 410 aa8.5□□□□□ -1.05
SKA1-204ENST00000488454 SLC35E4Q6ICL7 350 aa8.5□□□□□ -1.05
SKA1-204ENST00000488454 C6orf201Q7Z4U5 140 aa8.5□□□□□ -1.05
SKA1-204ENST00000488454 TPRX1Q8N7U7 411 aa8.5□□□□□ -1.05
SKA1-204ENST00000488454 LY6G5BQ8NDX9 201 aa8.5□□□□□ -1.05
SKA1-204ENST00000488454 C8orf46Q8TAG6 207 aa8.5□□□□□ -1.05
SKA1-204ENST00000488454 ARHGAP5-AS1Q96IT6 56 aa8.5□□□□□ -1.05
SKA1-204ENST00000488454 CMTM3Q96MX0 182 aa8.5□□□□□ -1.05
SKA1-204ENST00000488454 DCUN1D5Q9BTE7 237 aa8.5□□□□□ -1.05
SKA1-204ENST00000488454 TMPRSS13Q9BYE2 586 aa8.5□□□□□ -1.05
SKA1-204ENST00000488454 C7orf69Q9H7B7 122 aa8.5□□□□□ -1.05
SKA1-204ENST00000488454 CHMP1AQ9HD42 196 aaPredicted RBP8.5□□□□□ -1.05
SKA1-204ENST00000488454 C19orf12Q9NSK7 152 aa8.5□□□□□ -1.05
SKA1-204ENST00000488454 ZNF581Q9P0T4 197 aa8.5□□□□□ -1.05
SKA1-204ENST00000488454 ONECUT1Q9UBC0 465 aa8.5□□□□□ -1.05
SKA1-204ENST00000488454 TRAPPC2LQ9UL33 140 aa8.5□□□□□ -1.05
SKA1-204ENST00000488454 HSF4Q9ULV5 492 aa8.5□□□□□ -1.05
SKA1-204ENST00000488454 TEX15Q9BXT5 2789 aa8.5□□□□□ -1.05
SKA1-204ENST00000488454 VPS13CQ709C8 3753 aa8.49□□□□□ -1.05
SKA1-204ENST00000488454 ITPR3Q14573 2671 aa8.49□□□□□ -1.05
SKA1-204ENST00000488454 A0A075B6Q4 140 aa8.49□□□□□ -1.05
SKA1-204ENST00000488454 ODAMA1E959 279 aa8.49□□□□□ -1.05
SKA1-204ENST00000488454 A8MV72 311 aaPredicted RBP8.49□□□□□ -1.05
SKA1-204ENST00000488454 FAM25AB3EWG3 89 aa8.49□□□□□ -1.05
SKA1-204ENST00000488454 FAM25CB3EWG5 89 aa8.49□□□□□ -1.05
SKA1-204ENST00000488454 FAM25GB3EWG6 89 aa8.49□□□□□ -1.05
SKA1-204ENST00000488454 EIF4EBP3O60516 100 aaPredicted RBP8.49□□□□□ -1.05
SKA1-204ENST00000488454 MT-ND4P03905 459 aa8.49□□□□□ -1.05
SKA1-204ENST00000488454 CD3GP09693 182 aa8.49□□□□□ -1.05
SKA1-204ENST00000488454 GZMHP20718 246 aa8.49□□□□□ -1.05
SKA1-204ENST00000488454 TALDO1P37837 337 aa8.49□□□□□ -1.05
SKA1-204ENST00000488454 TMEM50BP56557 158 aa8.49□□□□□ -1.05
SKA1-204ENST00000488454 ARFRP1Q13795 201 aa8.49□□□□□ -1.05
SKA1-204ENST00000488454 CDNFQ49AH0 187 aa8.49□□□□□ -1.05
SKA1-204ENST00000488454 TEX29Q8N6K0 151 aa8.49□□□□□ -1.05
SKA1-204ENST00000488454 MCFD2Q8NI22 146 aa8.49□□□□□ -1.05
SKA1-204ENST00000488454 SMR3AQ99954 134 aa8.49□□□□□ -1.05
SKA1-204ENST00000488454 SULT4A1Q9BR01 284 aa8.49□□□□□ -1.05
SKA1-204ENST00000488454 PECRQ9BY49 303 aa8.49□□□□□ -1.05
SKA1-204ENST00000488454 ABCG5Q9H222 651 aa8.49□□□□□ -1.05
SKA1-204ENST00000488454 RIMS4Q9H426 269 aaPredicted RBP8.49□□□□□ -1.05
SKA1-204ENST00000488454 NCOR1P1Q9H4R4 102 aa8.49□□□□□ -1.05
SKA1-204ENST00000488454 RAB9BQ9NP90 201 aa8.49□□□□□ -1.05
SKA1-204ENST00000488454 KCNIP1Q9NZI2 227 aa8.49□□□□□ -1.05
SKA1-204ENST00000488454 KIF25Q9UIL4 384 aa8.49□□□□□ -1.05
SKA1-204ENST00000488454 ADAM30Q9UKF2 790 aa8.49□□□□□ -1.05
SKA1-204ENST00000488454 UBE2J1Q9Y385 318 aaPredicted RBP8.49□□□□□ -1.05
SKA1-204ENST00000488454 AUP1Q9Y679 476 aa8.49□□□□□ -1.05
SKA1-204ENST00000488454 LINC00312Q9Y6C7 94 aa8.49□□□□□ -1.05
SKA1-204ENST00000488454 OTOGQ6ZRI0 2925 aa8.48□□□□□ -1.05
SKA1-204ENST00000488454 TRAV18A0A075B6X5 111 aa8.48□□□□□ -1.05
SKA1-204ENST00000488454 SERPINE3A8MV23 424 aa8.48□□□□□ -1.05
SKA1-204ENST00000488454 RAB27BO00194 218 aa8.48□□□□□ -1.05
SKA1-204ENST00000488454 HPGDSO60760 199 aa8.48□□□□□ -1.05
SKA1-204ENST00000488454 TOX4O94842 621 aa8.48□□□□□ -1.05
SKA1-204ENST00000488454 APOA1P02647 267 aa8.48□□□□□ -1.05
SKA1-204ENST00000488454 ZNF728P0DKX0 622 aa8.48□□□□□ -1.05
SKA1-204ENST00000488454 GNB3P16520 340 aa8.48□□□□□ -1.05
SKA1-204ENST00000488454 HNF1AP20823 631 aa8.48□□□□□ -1.05
SKA1-204ENST00000488454 MNDAP41218 407 aa8.48□□□□□ -1.05
SKA1-204ENST00000488454 PAX5Q02548 391 aa8.48□□□□□ -1.05
SKA1-204ENST00000488454 PAX2Q02962 417 aa8.48□□□□□ -1.05
SKA1-204ENST00000488454 PAX8Q06710 450 aa8.48□□□□□ -1.05
SKA1-204ENST00000488454 MOGAT2Q3SYC2 334 aa8.48□□□□□ -1.05
SKA1-204ENST00000488454 PLAC9Q5JTB6 97 aa8.48□□□□□ -1.05
SKA1-204ENST00000488454 RSBN1Q5VWQ0 802 aaPredicted RBP8.48□□□□□ -1.05
SKA1-204ENST00000488454 ZNF497Q6ZNH5 498 aa8.48□□□□□ -1.05
SKA1-204ENST00000488454 C1orf122Q6ZSJ8 110 aa8.48□□□□□ -1.05
SKA1-204ENST00000488454 KIR3DL3Q8N743 410 aa8.48□□□□□ -1.05
SKA1-204ENST00000488454 PLPPR1Q8TBJ4 325 aa8.48□□□□□ -1.05
SKA1-204ENST00000488454 SETD6Q8TBK2 473 aa8.48□□□□□ -1.05
SKA1-204ENST00000488454 CCDC107Q8WV48 283 aa8.48□□□□□ -1.05
SKA1-204ENST00000488454 CORO2AQ92828 525 aa8.48□□□□□ -1.05
SKA1-204ENST00000488454 SLC25A38Q96DW6 304 aa8.48□□□□□ -1.05
SKA1-204ENST00000488454 COQ2Q96H96 371 aa8.48□□□□□ -1.05
SKA1-204ENST00000488454 ZNF714Q96N38 554 aa8.48□□□□□ -1.05
SKA1-204ENST00000488454 CMSS1Q9BQ75 279 aaKnown RBP8.48□□□□□ -1.05
SKA1-204ENST00000488454 C6orf62Q9GZU0 229 aaPredicted RBP8.48□□□□□ -1.05
SKA1-204ENST00000488454 GAL3ST2Q9H3Q3 398 aa8.48□□□□□ -1.05
SKA1-204ENST00000488454 ZMAT3Q9HA38 289 aaKnown RBP8.48□□□□□ -1.05
SKA1-204ENST00000488454 TAS2R3Q9NYW6 316 aa8.48□□□□□ -1.05
SKA1-204ENST00000488454 AK3Q9UIJ7 227 aa8.48□□□□□ -1.05
SKA1-204ENST00000488454 KPTNQ9Y664 436 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms