RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 ST3GAL6Q9Y274 331 aa15.41■□□□□ 0.06
CD55-209ENST00000488171 EXOSC1Q9Y3B2 195 aaKnown RBP15.41■□□□□ 0.06
CD55-209ENST00000488171 TRBV5-5A0A0J9YX44 114 aa15.4■□□□□ 0.06
CD55-209ENST00000488171 SH2D7A6NKC9 451 aaPredicted RBP15.4■□□□□ 0.06
CD55-209ENST00000488171 J3QR06 171 aa15.4■□□□□ 0.06
CD55-209ENST00000488171 LPLP06858 475 aa15.4■□□□□ 0.06
CD55-209ENST00000488171 IGFBP3P17936 291 aaPredicted RBP15.4■□□□□ 0.06
CD55-209ENST00000488171 MYL12AP19105 171 aa15.4■□□□□ 0.06
CD55-209ENST00000488171 BDKRB2P30411 391 aa15.4■□□□□ 0.06
CD55-209ENST00000488171 ZNF93P35789 620 aaPredicted RBP15.4■□□□□ 0.06
CD55-209ENST00000488171 RBM11P57052 281 aaKnown RBP15.4■□□□□ 0.06
CD55-209ENST00000488171 PPP3R1P63098 170 aa15.4■□□□□ 0.06
CD55-209ENST00000488171 TCTEX1D4Q5JR98 221 aa15.4■□□□□ 0.06
CD55-209ENST00000488171 DMKNQ6E0U4 476 aaPredicted RBP15.4■□□□□ 0.06
CD55-209ENST00000488171 OSR2Q8N2R0 312 aa15.4■□□□□ 0.06
CD55-209ENST00000488171 ZNF485Q8NCK3 441 aa15.4■□□□□ 0.06
CD55-209ENST00000488171 CAPSLQ8WWF8 208 aa15.4■□□□□ 0.06
CD55-209ENST00000488171 GHSRQ92847 366 aa15.4■□□□□ 0.06
CD55-209ENST00000488171 DPCDQ9BVM2 203 aaPredicted RBP15.4■□□□□ 0.06
CD55-209ENST00000488171 METTL9Q9H1A3 318 aa15.4■□□□□ 0.06
CD55-209ENST00000488171 ING4Q9UNL4 249 aa15.4■□□□□ 0.06
CD55-209ENST00000488171 TRAV39A0A0B4J263 110 aa15.39■□□□□ 0.05
CD55-209ENST00000488171 FAM90A18PA6NE21 464 aa15.39■□□□□ 0.05
CD55-209ENST00000488171 FAM90A16PA6NEW6 464 aa15.39■□□□□ 0.05
CD55-209ENST00000488171 FAM90A20PA6NIJ5 464 aa15.39■□□□□ 0.05
CD55-209ENST00000488171 FAM90A9PA6NNJ1 464 aa15.39■□□□□ 0.05
CD55-209ENST00000488171 FAM90A12PA8MX19 464 aa15.39■□□□□ 0.05
CD55-209ENST00000488171 FAM90A5PA8MXJ8 464 aa15.39■□□□□ 0.05
CD55-209ENST00000488171 XPNPEP2O43895 674 aa15.39■□□□□ 0.05
CD55-209ENST00000488171 FAM90A15PP0C7V4 464 aa15.39■□□□□ 0.05
CD55-209ENST00000488171 FAM90A13PP0C7W8 464 aa15.39■□□□□ 0.05
CD55-209ENST00000488171 FAM90A14PP0C7W9 464 aa15.39■□□□□ 0.05
CD55-209ENST00000488171 FAM90A24PP0C7X0 464 aa15.39■□□□□ 0.05
CD55-209ENST00000488171 SSTR5P35346 364 aa15.39■□□□□ 0.05
CD55-209ENST00000488171 MNDAP41218 407 aa15.39■□□□□ 0.05
CD55-209ENST00000488171 RPS11P62280 158 aaKnown RBP eCLIP15.39■□□□□ 0.05
CD55-209ENST00000488171 ADARB1P78563 741 aaKnown RBP15.39■□□□□ 0.05
CD55-209ENST00000488171 LTC4SQ16873 150 aa15.39■□□□□ 0.05
CD55-209ENST00000488171 OXLD1Q5BKU9 147 aa15.39■□□□□ 0.05
CD55-209ENST00000488171 TTC23Q5W5X9 447 aa15.39■□□□□ 0.05
CD55-209ENST00000488171 OR52N1Q8NH53 320 aa15.39■□□□□ 0.05
CD55-209ENST00000488171 RFESDQ8TAC1 157 aa15.39■□□□□ 0.05
CD55-209ENST00000488171 TOMM40LQ969M1 308 aa15.39■□□□□ 0.05
CD55-209ENST00000488171 RPEQ96AT9 228 aa15.39■□□□□ 0.05
CD55-209ENST00000488171 TMEM80Q96HE8 168 aa15.39■□□□□ 0.05
CD55-209ENST00000488171 PSG11Q9UQ72 335 aa15.39■□□□□ 0.05
CD55-209ENST00000488171 AMMECR1Q9Y4X0 333 aaPredicted RBP15.39■□□□□ 0.05
CD55-209ENST00000488171 A0A1W2PRX2 142 aa15.38■□□□□ 0.05
CD55-209ENST00000488171 MAGEA13PA6NCF6 341 aa15.38■□□□□ 0.05
CD55-209ENST00000488171 GEMIN2O14893 280 aaKnown RBP15.38■□□□□ 0.05
CD55-209ENST00000488171 OR7C1O76099 320 aaPredicted RBP15.38■□□□□ 0.05
CD55-209ENST00000488171 PRB2P02812 416 aaPredicted RBP15.38■□□□□ 0.05
CD55-209ENST00000488171 RIPK1Q13546 671 aa15.38■□□□□ 0.05
CD55-209ENST00000488171 DIAPH2-AS1Q14236 149 aa15.38■□□□□ 0.05
CD55-209ENST00000488171 CENPVQ7Z7K6 275 aaPredicted RBP15.38■□□□□ 0.05
CD55-209ENST00000488171 PACRGLQ8N7B6 248 aa15.38■□□□□ 0.05
CD55-209ENST00000488171 ZFP41Q8N8Y5 198 aa15.38■□□□□ 0.05
CD55-209ENST00000488171 OR10A7Q8NGE5 316 aa15.38■□□□□ 0.05
CD55-209ENST00000488171 GGHQ92820 318 aa15.38■□□□□ 0.05
CD55-209ENST00000488171 PGLYRP3Q96LB9 341 aa15.38■□□□□ 0.05
CD55-209ENST00000488171 ZNF184Q99676 751 aaPredicted RBP15.38■□□□□ 0.05
CD55-209ENST00000488171 PCDHB16Q9NRJ7 776 aa15.38■□□□□ 0.05
CD55-209ENST00000488171 TRAV8-7A0A075B6U6 113 aa15.37■□□□□ 0.05
CD55-209ENST00000488171 A0A1W2PP11 408 aa15.37■□□□□ 0.05
CD55-209ENST00000488171 A0A1W2PPI3 338 aa15.37■□□□□ 0.05
CD55-209ENST00000488171 GPX5O75715 221 aa15.37■□□□□ 0.05
CD55-209ENST00000488171 CSTBP04080 98 aaKnown RBP15.37■□□□□ 0.05
CD55-209ENST00000488171 SERPINA2P20848 420 aa15.37■□□□□ 0.05
CD55-209ENST00000488171 GNG10P50151 68 aa15.37■□□□□ 0.05
CD55-209ENST00000488171 C10orf99Q6UWK7 81 aa15.37■□□□□ 0.05
CD55-209ENST00000488171 LINC00596Q86U02 117 aa15.37■□□□□ 0.05
CD55-209ENST00000488171 THNSL2Q86YJ6 484 aa15.37■□□□□ 0.05
CD55-209ENST00000488171 SETD9Q8NE22 299 aa15.37■□□□□ 0.05
CD55-209ENST00000488171 OR56B4Q8NH76 319 aa15.37■□□□□ 0.05
CD55-209ENST00000488171 C8orf4Q9NR00 106 aa15.37■□□□□ 0.05
CD55-209ENST00000488171 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.37■□□□□ 0.05
CD55-209ENST00000488171 M0QZK8 103 aa15.36■□□□□ 0.05
CD55-209ENST00000488171 SNRNP70P08621 437 aaKnown RBP15.36■□□□□ 0.05
CD55-209ENST00000488171 FAM106CPP0CH98 169 aa15.36■□□□□ 0.05
CD55-209ENST00000488171 MADCAM1Q13477 382 aa15.36■□□□□ 0.05
CD55-209ENST00000488171 Q499Y3 187 aa15.36■□□□□ 0.05
CD55-209ENST00000488171 YIF1BQ5BJH7 314 aa15.36■□□□□ 0.05
CD55-209ENST00000488171 LAIR2Q6ISS4 152 aa15.36■□□□□ 0.05
CD55-209ENST00000488171 SLC16A12Q6ZSM3 486 aa15.36■□□□□ 0.05
CD55-209ENST00000488171 DHRSXQ8N5I4 330 aa15.36■□□□□ 0.05
CD55-209ENST00000488171 DRAM1Q8N682 238 aa15.36■□□□□ 0.05
CD55-209ENST00000488171 S100A13Q99584 98 aa15.36■□□□□ 0.05
CD55-209ENST00000488171 PAK1IP1Q9NWT1 392 aaPredicted RBP15.36■□□□□ 0.05
CD55-209ENST00000488171 CHCHD3Q9NX63 227 aaKnown RBP15.36■□□□□ 0.05
CD55-209ENST00000488171 MOB4Q9Y3A3 225 aa15.36■□□□□ 0.05
CD55-209ENST00000488171 HSPE1-MOB4S4R3N1 261 aa15.36■□□□□ 0.05
CD55-209ENST00000488171 TRBV5-7A0A0A0MS05 114 aa15.36■□□□□ 0.05
CD55-209ENST00000488171 TMEM30CPA0ZSE6 113 aa15.36■□□□□ 0.05
CD55-209ENST00000488171 FSTP19883 344 aa15.36■□□□□ 0.05
CD55-209ENST00000488171 ST3GAL4Q11206 333 aa15.36■□□□□ 0.05
CD55-209ENST00000488171 MED21Q13503 144 aa15.36■□□□□ 0.05
CD55-209ENST00000488171 MPV17LQ2QL34 196 aa15.36■□□□□ 0.05
CD55-209ENST00000488171 SLC22A6Q4U2R8 563 aa15.36■□□□□ 0.05
CD55-209ENST00000488171 MYDGFQ969H8 173 aa15.36■□□□□ 0.05
CD55-209ENST00000488171 A0A1W2PPE3 182 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms