RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 RP1L1Q8IWN7 2480 aaPredicted RBP5.94□□□□□ -1.46
SF3A3-206ENST00000487062 NCOR2Q9Y618 2525 aa5.94□□□□□ -1.46
SF3A3-206ENST00000487062 DSPP15924 2871 aaKnown RBP5.93□□□□□ -1.46
SF3A3-206ENST00000487062 TMEM30CPA0ZSE6 113 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 ANKRD34BA5PLL1 514 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 FAM172BPA6NC97 362 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 OR5H14A6NHG9 310 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 RFPL4AA6NLU0 287 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 LRRC30A6NM36 301 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 E7EQL1 145 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 RFPL4AL1F8VTS6 287 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 SLC22A5O76082 557 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 LHBP01229 141 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 C1QBP02746 253 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 TK1P04183 234 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 CTSDP07339 412 aaPredicted RBP5.93□□□□□ -1.46
SF3A3-206ENST00000487062 ZNF728P0DKX0 622 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 AKR1C4P17516 323 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 GNLYP22749 145 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 ZBTB25P24278 435 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 CD34P28906 385 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 FCGR2CP31995 323 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 PRDX2P32119 198 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 UCP3P55916 312 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 SEC61A1P61619 476 aaKnown RBP5.93□□□□□ -1.46
SF3A3-206ENST00000487062 IL13RA1P78552 427 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 DHODHQ02127 395 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 DHRS2Q13268 280 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 EFNB3Q15768 340 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 ABCA11PQ4W5N1 156 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 AADACL3Q5VUY0 350 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 SLC35E4Q6ICL7 350 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 LIN54Q6MZP7 749 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 LPCAT3Q6P1A2 487 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 ZNF497Q6ZNH5 498 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 NOXA1Q86UR1 476 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 SGPP2Q8IWX5 399 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 C1orf87Q8N0U7 546 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 GAPTQ8N292 157 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 MUC20Q8N307 709 aaPredicted RBP5.93□□□□□ -1.46
SF3A3-206ENST00000487062 GCSAMQ8N6F7 178 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 ASCC1Q8N9N2 400 aaKnown RBP5.93□□□□□ -1.46
SF3A3-206ENST00000487062 BOLLQ8N9W6 283 aaKnown RBP5.93□□□□□ -1.46
SF3A3-206ENST00000487062 UXS1Q8NBZ7 420 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 OR2AK2Q8NG84 335 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 OR11H7Q8NGC8 314 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 OR52B4Q8NGK2 314 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 PLPPR1Q8TBJ4 325 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 Q8TCH9 128 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 CAPSLQ8WWF8 208 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 ASB13Q8WXK3 278 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 MRGPRFQ96AM1 343 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 FYTTD1Q96QD9 318 aaKnown RBP5.93□□□□□ -1.46
SF3A3-206ENST00000487062 PHB2Q99623 299 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 TRAF4Q9BUZ4 470 aaPredicted RBP5.93□□□□□ -1.46
SF3A3-206ENST00000487062 ZNF436Q9C0F3 470 aaPredicted RBP5.93□□□□□ -1.46
SF3A3-206ENST00000487062 RANBP3Q9H6Z4 567 aaPredicted RBP5.93□□□□□ -1.46
SF3A3-206ENST00000487062 GCM1Q9NP62 436 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 DYNLRB1Q9NP97 96 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 DECR2Q9NUI1 292 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 KCNIP1Q9NZI2 227 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 TRAPPC2LQ9UL33 140 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 PPP1R3CQ9UQK1 317 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 DYSFO75923 2080 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 POLEQ07864 2286 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 PCNX1Q96RV3 2341 aa5.93□□□□□ -1.46
SF3A3-206ENST00000487062 MAP1BP46821 2468 aaKnown RBP5.92□□□□□ -1.46
SF3A3-206ENST00000487062 A0A0B4J2A0 478 aa5.92□□□□□ -1.46
SF3A3-206ENST00000487062 C9orf170A2RU37 121 aa5.92□□□□□ -1.46
SF3A3-206ENST00000487062 OOEPA6NGQ2 149 aa5.92□□□□□ -1.46
SF3A3-206ENST00000487062 BET1O15155 118 aa5.92□□□□□ -1.46
SF3A3-206ENST00000487062 DUS4LO95620 317 aaKnown RBP5.92□□□□□ -1.46
SF3A3-206ENST00000487062 GIPP09681 153 aaPredicted RBP5.92□□□□□ -1.46
SF3A3-206ENST00000487062 PSG2P11465 335 aa5.92□□□□□ -1.46
SF3A3-206ENST00000487062 MUC1P15941 1255 aaPredicted RBP5.92□□□□□ -1.46
SF3A3-206ENST00000487062 EGR1P18146 543 aa5.92□□□□□ -1.46
SF3A3-206ENST00000487062 CXCL3P19876 107 aa5.92□□□□□ -1.46
SF3A3-206ENST00000487062 S100GP29377 79 aa5.92□□□□□ -1.46
SF3A3-206ENST00000487062 ERP29P30040 261 aaKnown RBP5.92□□□□□ -1.46
SF3A3-206ENST00000487062 GABRA2P47869 451 aa5.92□□□□□ -1.46
SF3A3-206ENST00000487062 CEBPDP49716 269 aaPredicted RBP5.92□□□□□ -1.46
SF3A3-206ENST00000487062 SMCPP49901 116 aaPredicted RBP5.92□□□□□ -1.46
SF3A3-206ENST00000487062 FXYD4P59646 89 aa5.92□□□□□ -1.46
SF3A3-206ENST00000487062 RAP2BP61225 183 aa5.92□□□□□ -1.46
SF3A3-206ENST00000487062 SNRPD2P62316 118 aaKnown RBP5.92□□□□□ -1.46
SF3A3-206ENST00000487062 CCL8P80075 99 aa5.92□□□□□ -1.46
SF3A3-206ENST00000487062 COL10A1Q03692 680 aa5.92□□□□□ -1.46
SF3A3-206ENST00000487062 TFF3Q07654 80 aa5.92□□□□□ -1.46
SF3A3-206ENST00000487062 PPP1R1AQ13522 171 aa5.92□□□□□ -1.46
SF3A3-206ENST00000487062 SNTB1Q13884 538 aaKnown RBP5.92□□□□□ -1.46
SF3A3-206ENST00000487062 ATXN7L3Q14CW9 347 aaPredicted RBP5.92□□□□□ -1.46
SF3A3-206ENST00000487062 C6orf183Q5T699 404 aa5.92□□□□□ -1.46
SF3A3-206ENST00000487062 ZNF660Q6AZW8 331 aaPredicted RBP5.92□□□□□ -1.46
SF3A3-206ENST00000487062 TRAT1Q6PIZ9 186 aa5.92□□□□□ -1.46
SF3A3-206ENST00000487062 C17orf107Q6ZR85 190 aa5.92□□□□□ -1.46
SF3A3-206ENST00000487062 DMRTC2Q8IXT2 367 aaPredicted RBP5.92□□□□□ -1.46
SF3A3-206ENST00000487062 SLC38A6Q8IZM9 456 aa5.92□□□□□ -1.46
SF3A3-206ENST00000487062 FAM185AQ8N0U4 392 aa5.92□□□□□ -1.46
SF3A3-206ENST00000487062 ZNF565Q8N9K5 539 aa5.92□□□□□ -1.46
SF3A3-206ENST00000487062 CCDC71LQ8N9Z2 235 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms