RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 RNF7Q9UBF6 113 aa9.79□□□□□ -0.84
PRKCB-207ENST00000486868 ERRFI1Q9UJM3 462 aaPredicted RBP9.79□□□□□ -0.84
PRKCB-207ENST00000486868 FBXO9Q9UK97 447 aaPredicted RBP9.79□□□□□ -0.84
PRKCB-207ENST00000486868 MAP1BP46821 2468 aaKnown RBP9.79□□□□□ -0.84
PRKCB-207ENST00000486868 CFAP47Q6ZTR5 3102 aa9.78□□□□□ -0.84
PRKCB-207ENST00000486868 hCG_1807616A0A1W2PRN6 198 aa9.78□□□□□ -0.84
PRKCB-207ENST00000486868 OOEPA6NGQ2 149 aa9.78□□□□□ -0.84
PRKCB-207ENST00000486868 SHISA9B4DS77 424 aa9.78□□□□□ -0.84
PRKCB-207ENST00000486868 SIRPB1O00241 398 aa9.78□□□□□ -0.84
PRKCB-207ENST00000486868 SCTP09683 121 aa9.78□□□□□ -0.84
PRKCB-207ENST00000486868 OR4A8P0C604 315 aa9.78□□□□□ -0.84
PRKCB-207ENST00000486868 SLC25A4P12235 298 aa9.78□□□□□ -0.84
PRKCB-207ENST00000486868 AADACP22760 399 aa9.78□□□□□ -0.84
PRKCB-207ENST00000486868 PRDX2P32119 198 aa9.78□□□□□ -0.84
PRKCB-207ENST00000486868 RBMXP38159 391 aaKnown RBP9.78□□□□□ -0.84
PRKCB-207ENST00000486868 SRPXP78539 464 aa9.78□□□□□ -0.84
PRKCB-207ENST00000486868 TNFAIP6P98066 277 aaPredicted RBP9.78□□□□□ -0.84
PRKCB-207ENST00000486868 IFITM2Q01629 132 aa9.78□□□□□ -0.84
PRKCB-207ENST00000486868 HERPUD1Q15011 391 aa9.78□□□□□ -0.84
PRKCB-207ENST00000486868 IGFBP7Q16270 282 aa9.78□□□□□ -0.84
PRKCB-207ENST00000486868 CR1LQ2VPA4 569 aa9.78□□□□□ -0.84
PRKCB-207ENST00000486868 ABCA11PQ4W5N1 156 aa9.78□□□□□ -0.84
PRKCB-207ENST00000486868 IGSF11Q5DX21 431 aa9.78□□□□□ -0.84
PRKCB-207ENST00000486868 BEX5Q5H9J7 111 aa9.78□□□□□ -0.84
PRKCB-207ENST00000486868 C6orf183Q5T699 404 aa9.78□□□□□ -0.84
PRKCB-207ENST00000486868 VHLLQ6RSH7 139 aa9.78□□□□□ -0.84
PRKCB-207ENST00000486868 GSG1LQ6UXU4 331 aa9.78□□□□□ -0.84
PRKCB-207ENST00000486868 C20orf204Q6ZNR8 217 aa9.78□□□□□ -0.84
PRKCB-207ENST00000486868 LDLRAD3Q86YD5 345 aa9.78□□□□□ -0.84
PRKCB-207ENST00000486868 H1FOOQ8IZA3 346 aaPredicted RBP9.78□□□□□ -0.84
PRKCB-207ENST00000486868 ZNF808Q8N4W9 903 aaPredicted RBP9.78□□□□□ -0.84
PRKCB-207ENST00000486868 GCSAMQ8N6F7 178 aa9.78□□□□□ -0.84
PRKCB-207ENST00000486868 PLPPR1Q8TBJ4 325 aa9.78□□□□□ -0.84
PRKCB-207ENST00000486868 ITLN1Q8WWA0 313 aa9.78□□□□□ -0.84
PRKCB-207ENST00000486868 LURAP1Q96LR2 239 aa9.78□□□□□ -0.84
PRKCB-207ENST00000486868 TMEM246Q9BRR3 403 aa9.78□□□□□ -0.84
PRKCB-207ENST00000486868 NAA60Q9H7X0 242 aa9.78□□□□□ -0.84
PRKCB-207ENST00000486868 KCNJ16Q9NPI9 418 aa9.78□□□□□ -0.84
PRKCB-207ENST00000486868 UFSP2Q9NUQ7 469 aa9.78□□□□□ -0.84
PRKCB-207ENST00000486868 KCNIP1Q9NZI2 227 aa9.78□□□□□ -0.84
PRKCB-207ENST00000486868 TRAPPC2LQ9UL33 140 aa9.78□□□□□ -0.84
PRKCB-207ENST00000486868 OR2W1Q9Y3N9 320 aa9.78□□□□□ -0.84
PRKCB-207ENST00000486868 ASPMQ8IZT6 3477 aa9.78□□□□□ -0.84
PRKCB-207ENST00000486868 TLN1Q9Y490 2541 aaKnown RBP9.77□□□□□ -0.85
PRKCB-207ENST00000486868 IGKV1-6A0A0C4DH72 117 aa9.77□□□□□ -0.85
PRKCB-207ENST00000486868 MED19A0JLT2 244 aaPredicted RBP9.77□□□□□ -0.85
PRKCB-207ENST00000486868 C17orf100A8MU93 164 aa9.77□□□□□ -0.85
PRKCB-207ENST00000486868 SMLR1H3BR10 107 aa9.77□□□□□ -0.85
PRKCB-207ENST00000486868 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.77□□□□□ -0.85
PRKCB-207ENST00000486868 GPR31O00270 319 aa9.77□□□□□ -0.85
PRKCB-207ENST00000486868 WNT9BO14905 357 aa9.77□□□□□ -0.85
PRKCB-207ENST00000486868 SPRY3O43610 288 aa9.77□□□□□ -0.85
PRKCB-207ENST00000486868 PSPNO60542 156 aa9.77□□□□□ -0.85
PRKCB-207ENST00000486868 ZNF737O75373 536 aa9.77□□□□□ -0.85
PRKCB-207ENST00000486868 HEXAP06865 529 aa9.77□□□□□ -0.85
PRKCB-207ENST00000486868 CD3EP07766 207 aa9.77□□□□□ -0.85
PRKCB-207ENST00000486868 PSG2P11465 335 aa9.77□□□□□ -0.85
PRKCB-207ENST00000486868 MUC1P15941 1255 aaPredicted RBP9.77□□□□□ -0.85
PRKCB-207ENST00000486868 NFYAP23511 347 aaPredicted RBP9.77□□□□□ -0.85
PRKCB-207ENST00000486868 S100GP29377 79 aa9.77□□□□□ -0.85
PRKCB-207ENST00000486868 APOBEC3AP31941 199 aaPredicted RBP9.77□□□□□ -0.85
PRKCB-207ENST00000486868 SERPINF1P36955 418 aa9.77□□□□□ -0.85
PRKCB-207ENST00000486868 OR3A1P47881 315 aa9.77□□□□□ -0.85
PRKCB-207ENST00000486868 PIGPP57054 158 aa9.77□□□□□ -0.85
PRKCB-207ENST00000486868 ESCO2Q56NI9 601 aa9.77□□□□□ -0.85
PRKCB-207ENST00000486868 DCAF12L2Q5VW00 463 aa9.77□□□□□ -0.85
PRKCB-207ENST00000486868 TEX36Q5VZQ5 186 aa9.77□□□□□ -0.85
PRKCB-207ENST00000486868 ASCC1Q8N9N2 400 aaKnown RBP9.77□□□□□ -0.85
PRKCB-207ENST00000486868 OR5D13Q8NGL4 314 aa9.77□□□□□ -0.85
PRKCB-207ENST00000486868 OR10J5Q8NHC4 309 aa9.77□□□□□ -0.85
PRKCB-207ENST00000486868 CASTOR1Q8WTX7 329 aa9.77□□□□□ -0.85
PRKCB-207ENST00000486868 RTN4IP1Q8WWV3 396 aaPredicted RBP9.77□□□□□ -0.85
PRKCB-207ENST00000486868 SDSLQ96GA7 329 aa9.77□□□□□ -0.85
PRKCB-207ENST00000486868 KIRREL1Q96J84 757 aa9.77□□□□□ -0.85
PRKCB-207ENST00000486868 AKR1E2Q96JD6 320 aa9.77□□□□□ -0.85
PRKCB-207ENST00000486868 CHIAQ9BZP6 476 aa9.77□□□□□ -0.85
PRKCB-207ENST00000486868 EGLN1Q9GZT9 426 aa9.77□□□□□ -0.85
PRKCB-207ENST00000486868 MS4A5Q9H3V2 200 aa9.77□□□□□ -0.85
PRKCB-207ENST00000486868 GCM1Q9NP62 436 aa9.77□□□□□ -0.85
PRKCB-207ENST00000486868 RAB9BQ9NP90 201 aa9.77□□□□□ -0.85
PRKCB-207ENST00000486868 SLC2A9Q9NRM0 540 aa9.77□□□□□ -0.85
PRKCB-207ENST00000486868 HSPB11Q9Y547 144 aa9.77□□□□□ -0.85
PRKCB-207ENST00000486868 IGF2RP11717 2491 aa9.76□□□□□ -0.85
PRKCB-207ENST00000486868 DMXL2Q8TDJ6 3036 aa9.76□□□□□ -0.85
PRKCB-207ENST00000486868 TEX13DA0A0J9YY54 714 aaPredicted RBP9.76□□□□□ -0.85
PRKCB-207ENST00000486868 DUXBA0A1W2PPF3 345 aa9.76□□□□□ -0.85
PRKCB-207ENST00000486868 B9A039 149 aa9.76□□□□□ -0.85
PRKCB-207ENST00000486868 M0R233 179 aa9.76□□□□□ -0.85
PRKCB-207ENST00000486868 HSPB6O14558 160 aa9.76□□□□□ -0.85
PRKCB-207ENST00000486868 MGST3O14880 152 aa9.76□□□□□ -0.85
PRKCB-207ENST00000486868 SIX6O95475 246 aa9.76□□□□□ -0.85
PRKCB-207ENST00000486868 RPA2P15927 270 aa9.76□□□□□ -0.85
PRKCB-207ENST00000486868 RCC1P18754 421 aaPredicted RBP9.76□□□□□ -0.85
PRKCB-207ENST00000486868 GNRHRP30968 328 aa9.76□□□□□ -0.85
PRKCB-207ENST00000486868 COL10A1Q03692 680 aa9.76□□□□□ -0.85
PRKCB-207ENST00000486868 BAMBIQ13145 260 aa9.76□□□□□ -0.85
PRKCB-207ENST00000486868 LY6DQ14210 128 aa9.76□□□□□ -0.85
PRKCB-207ENST00000486868 TMEM187Q14656 261 aa9.76□□□□□ -0.85
PRKCB-207ENST00000486868 NDUFA5Q16718 116 aa9.76□□□□□ -0.85
PRKCB-207ENST00000486868 ANKRD55Q3KP44 614 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms