RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 TMEM50BP56557 158 aa7.73□□□□□ -1.17
COL12A1-208ENST00000486533 FAM3AP98173 230 aa7.73□□□□□ -1.17
COL12A1-208ENST00000486533 IAH1Q2TAA2 248 aaPredicted RBP7.73□□□□□ -1.17
COL12A1-208ENST00000486533 FAM76BQ5HYJ3 339 aa7.73□□□□□ -1.17
COL12A1-208ENST00000486533 GPR157Q5UAW9 335 aa7.73□□□□□ -1.17
COL12A1-208ENST00000486533 ZSCAN4Q8NAM6 433 aaPredicted RBP7.73□□□□□ -1.17
COL12A1-208ENST00000486533 LFNGQ8NES3 379 aa7.73□□□□□ -1.17
COL12A1-208ENST00000486533 WFDC11Q8NEX6 87 aa7.73□□□□□ -1.17
COL12A1-208ENST00000486533 OR9K2Q8NGE7 335 aa7.73□□□□□ -1.17
COL12A1-208ENST00000486533 ABHD3Q8WU67 409 aa7.73□□□□□ -1.17
COL12A1-208ENST00000486533 TMED6Q8WW62 240 aa7.73□□□□□ -1.17
COL12A1-208ENST00000486533 SPIN2AQ99865 258 aa7.73□□□□□ -1.17
COL12A1-208ENST00000486533 SPIN2BQ9BPZ2 258 aa7.73□□□□□ -1.17
COL12A1-208ENST00000486533 RTBDNQ9BSG5 229 aaPredicted RBP7.73□□□□□ -1.17
COL12A1-208ENST00000486533 WDR13Q9H1Z4 485 aa7.73□□□□□ -1.17
COL12A1-208ENST00000486533 BCO1Q9HAY6 547 aa7.73□□□□□ -1.17
COL12A1-208ENST00000486533 CYTL1Q9NRR1 136 aa7.73□□□□□ -1.17
COL12A1-208ENST00000486533 UQCC1Q9NVA1 299 aa7.73□□□□□ -1.17
COL12A1-208ENST00000486533 PLEK2Q9NYT0 353 aa7.73□□□□□ -1.17
COL12A1-208ENST00000486533 CRYM-AS1A6NIL9 109 aa7.72□□□□□ -1.17
COL12A1-208ENST00000486533 F5H5K5 113 aa7.72□□□□□ -1.17
COL12A1-208ENST00000486533 EFNA2O43921 213 aa7.72□□□□□ -1.17
COL12A1-208ENST00000486533 MED6O75586 246 aa7.72□□□□□ -1.17
COL12A1-208ENST00000486533 HTR3BO95264 441 aa7.72□□□□□ -1.17
COL12A1-208ENST00000486533 IFNA4P05014 189 aa7.72□□□□□ -1.17
COL12A1-208ENST00000486533 SFTPBP07988 381 aa7.72□□□□□ -1.17
COL12A1-208ENST00000486533 ZNF728P0DKX0 622 aa7.72□□□□□ -1.17
COL12A1-208ENST00000486533 TMEM225BP0DP42 221 aa7.72□□□□□ -1.17
COL12A1-208ENST00000486533 PAX6P26367 422 aa7.72□□□□□ -1.17
COL12A1-208ENST00000486533 RPL12P30050 165 aaKnown RBP7.72□□□□□ -1.17
COL12A1-208ENST00000486533 CDAP32320 146 aa7.72□□□□□ -1.17
COL12A1-208ENST00000486533 HOXA1P49639 335 aaPredicted RBP7.72□□□□□ -1.17
COL12A1-208ENST00000486533 RAB32Q13637 225 aa7.72□□□□□ -1.17
COL12A1-208ENST00000486533 PEA15Q15121 130 aa7.72□□□□□ -1.17
COL12A1-208ENST00000486533 RNPS1Q15287 305 aaKnown RBP7.72□□□□□ -1.17
COL12A1-208ENST00000486533 FAM27BQ5VT28 67 aa7.72□□□□□ -1.17
COL12A1-208ENST00000486533 AADACL3Q5VUY0 350 aa7.72□□□□□ -1.17
COL12A1-208ENST00000486533 ALKBH2Q6NS38 261 aa7.72□□□□□ -1.17
COL12A1-208ENST00000486533 BEND4Q6ZU67 534 aa7.72□□□□□ -1.17
COL12A1-208ENST00000486533 C22orf34Q6ZV56 151 aa7.72□□□□□ -1.17
COL12A1-208ENST00000486533 ZNF100Q8IYN0 542 aa7.72□□□□□ -1.17
COL12A1-208ENST00000486533 GPR137CQ8N3F9 429 aa7.72□□□□□ -1.17
COL12A1-208ENST00000486533 BORCS8Q96FH0 119 aa7.72□□□□□ -1.17
COL12A1-208ENST00000486533 ABHD14BQ96IU4 210 aa7.72□□□□□ -1.17
COL12A1-208ENST00000486533 Q96M66 194 aa7.72□□□□□ -1.17
COL12A1-208ENST00000486533 CMSS1Q9BQ75 279 aaKnown RBP7.72□□□□□ -1.17
COL12A1-208ENST00000486533 PBDC1Q9BVG4 233 aa7.72□□□□□ -1.17
COL12A1-208ENST00000486533 SRXN1Q9BYN0 137 aa7.72□□□□□ -1.17
COL12A1-208ENST00000486533 FN3KRPQ9HA64 309 aa7.72□□□□□ -1.17
COL12A1-208ENST00000486533 RHOFQ9HBH0 211 aa7.72□□□□□ -1.17
COL12A1-208ENST00000486533 ZNF286AQ9HBT8 521 aa7.72□□□□□ -1.17
COL12A1-208ENST00000486533 DECR2Q9NUI1 292 aa7.72□□□□□ -1.17
COL12A1-208ENST00000486533 BEX4Q9NWD9 120 aaPredicted RBP7.72□□□□□ -1.17
COL12A1-208ENST00000486533 IL36GQ9NZH8 169 aa7.72□□□□□ -1.17
COL12A1-208ENST00000486533 GSKIPQ9P0R6 139 aa7.72□□□□□ -1.17
COL12A1-208ENST00000486533 ANXA10Q9UJ72 324 aa7.72□□□□□ -1.17
COL12A1-208ENST00000486533 NAV3Q8IVL0 2385 aa7.72□□□□□ -1.17
COL12A1-208ENST00000486533 DSCAMO60469 2012 aa7.72□□□□□ -1.17
COL12A1-208ENST00000486533 FREM1Q5H8C1 2179 aa7.72□□□□□ -1.17
COL12A1-208ENST00000486533 PRR14LQ5THK1 2151 aa7.72□□□□□ -1.17
COL12A1-208ENST00000486533 IGHV3-15A0A0B4J1V0 119 aa7.71□□□□□ -1.17
COL12A1-208ENST00000486533 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.71□□□□□ -1.17
COL12A1-208ENST00000486533 FAM90A10PA6NDY2 464 aa7.71□□□□□ -1.17
COL12A1-208ENST00000486533 FAM90A18PA6NE21 464 aa7.71□□□□□ -1.17
COL12A1-208ENST00000486533 FAM90A16PA6NEW6 464 aa7.71□□□□□ -1.17
COL12A1-208ENST00000486533 FAM90A20PA6NIJ5 464 aa7.71□□□□□ -1.17
COL12A1-208ENST00000486533 FAM90A8PA6NJQ4 464 aa7.71□□□□□ -1.17
COL12A1-208ENST00000486533 FAM90A7PA6NKC0 464 aa7.71□□□□□ -1.17
COL12A1-208ENST00000486533 FAM90A22PA8MWA6 464 aa7.71□□□□□ -1.17
COL12A1-208ENST00000486533 FAM90A12PA8MX19 464 aa7.71□□□□□ -1.17
COL12A1-208ENST00000486533 FAM90A5PA8MXJ8 464 aa7.71□□□□□ -1.17
COL12A1-208ENST00000486533 FAM90A23PA8MXZ1 464 aa7.71□□□□□ -1.17
COL12A1-208ENST00000486533 NUPL2O15504 423 aaKnown RBP7.71□□□□□ -1.17
COL12A1-208ENST00000486533 XRCC2O43543 280 aa7.71□□□□□ -1.17
COL12A1-208ENST00000486533 SGCEO43556 437 aa7.71□□□□□ -1.17
COL12A1-208ENST00000486533 GPR137BO60478 399 aa7.71□□□□□ -1.17
COL12A1-208ENST00000486533 SMPD2O60906 423 aa7.71□□□□□ -1.17
COL12A1-208ENST00000486533 FBXO24O75426 580 aa7.71□□□□□ -1.17
COL12A1-208ENST00000486533 DEDDO75618 318 aa7.71□□□□□ -1.17
COL12A1-208ENST00000486533 ADAP1O75689 374 aa7.71□□□□□ -1.17
COL12A1-208ENST00000486533 RAD51DO75771 328 aa7.71□□□□□ -1.17
COL12A1-208ENST00000486533 THBDP07204 575 aa7.71□□□□□ -1.17
COL12A1-208ENST00000486533 HOXB5P09067 269 aa7.71□□□□□ -1.17
COL12A1-208ENST00000486533 FAM90A15PP0C7V4 464 aa7.71□□□□□ -1.17
COL12A1-208ENST00000486533 FAM90A13PP0C7W8 464 aa7.71□□□□□ -1.17
COL12A1-208ENST00000486533 FAM90A14PP0C7W9 464 aa7.71□□□□□ -1.17
COL12A1-208ENST00000486533 FAM90A24PP0C7X0 464 aa7.71□□□□□ -1.17
COL12A1-208ENST00000486533 SLC2A1P11166 492 aa7.71□□□□□ -1.17
COL12A1-208ENST00000486533 HOXC12P31275 282 aa7.71□□□□□ -1.17
COL12A1-208ENST00000486533 RBP2P50120 134 aa7.71□□□□□ -1.17
COL12A1-208ENST00000486533 DVL1P1P54792 670 aaPredicted RBP7.71□□□□□ -1.17
COL12A1-208ENST00000486533 UCP3P55916 312 aa7.71□□□□□ -1.17
COL12A1-208ENST00000486533 MTCP1P56278 107 aa7.71□□□□□ -1.17
COL12A1-208ENST00000486533 RAB5BP61020 215 aa7.71□□□□□ -1.17
COL12A1-208ENST00000486533 HERV-K104P61576 105 aa7.71□□□□□ -1.17
COL12A1-208ENST00000486533 SUPT4H1P63272 117 aaKnown RBP7.71□□□□□ -1.17
COL12A1-208ENST00000486533 NKX6-1P78426 367 aaPredicted RBP7.71□□□□□ -1.17
COL12A1-208ENST00000486533 S100A12P80511 92 aa7.71□□□□□ -1.17
COL12A1-208ENST00000486533 H3F3AP84243 136 aa7.71□□□□□ -1.17
COL12A1-208ENST00000486533 ENDOGQ14249 297 aaKnown RBP7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms