RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 ISYNA1Q9NPH2 558 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 TAS2R4Q9NYW5 299 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 DPM3Q9P2X0 92 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 TCF19Q9Y242 345 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 ERGIC3Q9Y282 383 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 NOTCH1P46531 2555 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 FAM90A9PA6NNJ1 464 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 LEUTXA8MZ59 168 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 H0YHG0 523 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 M0QZ24 198 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 XPNPEP2O43895 674 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 SC5DO75845 299 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 CSTBP04080 98 aaKnown RBP5.64□□□□□ -1.51
VPS50-218ENST00000485994 CDK1P06493 297 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 CALCBP10092 127 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 GTF2F2P13984 249 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 CDK2P24941 298 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 MAPK3P27361 379 aaPredicted RBP5.64□□□□□ -1.51
VPS50-218ENST00000485994 GABRA5P31644 462 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 BRS3P32247 399 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 PPP3R1P63098 170 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 SCN1BQ07699 218 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 EDDM3AQ14507 147 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 SSX2Q16385 188 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 HLA-DRB5Q30154 266 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 Q3ZCU0 254 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 DDI2Q5TDH0 399 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 RSBN1Q5VWQ0 802 aaPredicted RBP5.64□□□□□ -1.51
VPS50-218ENST00000485994 CCBE1Q6UXH8 406 aaPredicted RBP5.64□□□□□ -1.51
VPS50-218ENST00000485994 C16orf82Q7Z2V1 217 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 SATL1Q86VE3 508 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 GAPTQ8N292 157 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 BPIFB6Q8NFQ5 453 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 OR52M1Q8NGK5 317 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 OR4P4Q8NGL7 312 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 CFHR4Q92496 578 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 PHYHIPQ92561 330 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 MYDGFQ969H8 173 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 S100A13Q99584 98 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 ZNF184Q99676 751 aaPredicted RBP5.64□□□□□ -1.51
VPS50-218ENST00000485994 UQCC2Q9BRT2 126 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 NPFFR1Q9GZQ6 430 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 PPA2Q9H2U2 334 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 DUSP21Q9H596 190 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 SCN3BQ9NY72 215 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 CKLFQ9UBR5 152 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 GHRLQ9UBU3 117 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 ING4Q9UNL4 249 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 ST3GAL6Q9Y274 331 aa5.64□□□□□ -1.51
VPS50-218ENST00000485994 TET2Q6N021 2002 aaPredicted RBP5.64□□□□□ -1.51
VPS50-218ENST00000485994 PLXNB1O43157 2135 aa5.63□□□□□ -1.51
VPS50-218ENST00000485994 TRAV8-7A0A075B6U6 113 aa5.63□□□□□ -1.51
VPS50-218ENST00000485994 BUB1B-PAK6H3BSN5 160 aa5.63□□□□□ -1.51
VPS50-218ENST00000485994 MYL12BO14950 172 aa5.63□□□□□ -1.51
VPS50-218ENST00000485994 PIN1P1O15428 100 aa5.63□□□□□ -1.51
VPS50-218ENST00000485994 ORC5O43913 435 aa5.63□□□□□ -1.51
VPS50-218ENST00000485994 CA11O75493 328 aa5.63□□□□□ -1.51
VPS50-218ENST00000485994 HTR3BO95264 441 aa5.63□□□□□ -1.51
VPS50-218ENST00000485994 CELP19835 753 aa5.63□□□□□ -1.51
VPS50-218ENST00000485994 MYF6P23409 242 aa5.63□□□□□ -1.51
VPS50-218ENST00000485994 COX7A1P24310 79 aa5.63□□□□□ -1.51
VPS50-218ENST00000485994 CEACAM3P40198 252 aa5.63□□□□□ -1.51
VPS50-218ENST00000485994 OR3A4PP47883 348 aa5.63□□□□□ -1.51
VPS50-218ENST00000485994 AQP4P55087 323 aa5.63□□□□□ -1.51
VPS50-218ENST00000485994 RBM11P57052 281 aaKnown RBP5.63□□□□□ -1.51
VPS50-218ENST00000485994 SLC35A2P78381 396 aa5.63□□□□□ -1.51
VPS50-218ENST00000485994 DYNC1I2Q13409 638 aaKnown RBP5.63□□□□□ -1.51
VPS50-218ENST00000485994 IRF3Q14653 427 aa5.63□□□□□ -1.51
VPS50-218ENST00000485994 HERPUD1Q15011 391 aa5.63□□□□□ -1.51
VPS50-218ENST00000485994 FAM189A2Q15884 450 aa5.63□□□□□ -1.51
VPS50-218ENST00000485994 PAN3Q58A45 887 aaKnown RBP5.63□□□□□ -1.51
VPS50-218ENST00000485994 C1orf100Q5SVJ3 147 aa5.63□□□□□ -1.51
VPS50-218ENST00000485994 CCDC144NLQ6NUI1 221 aa5.63□□□□□ -1.51
VPS50-218ENST00000485994 TRAPPC6BQ86SZ2 158 aa5.63□□□□□ -1.51
VPS50-218ENST00000485994 C8orf31Q8N9H6 132 aa5.63□□□□□ -1.51
VPS50-218ENST00000485994 SUMF2Q8NBJ7 301 aa5.63□□□□□ -1.51
VPS50-218ENST00000485994 OR4C13Q8NGP0 309 aa5.63□□□□□ -1.51
VPS50-218ENST00000485994 OR9G1Q8NH87 305 aa5.63□□□□□ -1.51
VPS50-218ENST00000485994 OR2T6Q8NHC8 308 aa5.63□□□□□ -1.51
VPS50-218ENST00000485994 WIPF2Q8TF74 440 aaPredicted RBP5.63□□□□□ -1.51
VPS50-218ENST00000485994 KIRREL1Q96J84 757 aa5.63□□□□□ -1.51
VPS50-218ENST00000485994 DERL3Q96Q80 235 aa5.63□□□□□ -1.51
VPS50-218ENST00000485994 NR1H4Q96RI1 486 aaPredicted RBP5.63□□□□□ -1.51
VPS50-218ENST00000485994 DPCDQ9BVM2 203 aaPredicted RBP5.63□□□□□ -1.51
VPS50-218ENST00000485994 SSBP4Q9BWG4 385 aaPredicted RBP5.63□□□□□ -1.51
VPS50-218ENST00000485994 MND1Q9BWT6 205 aa5.63□□□□□ -1.51
VPS50-218ENST00000485994 ANKRD60Q9BZ19 345 aa5.63□□□□□ -1.51
VPS50-218ENST00000485994 PRSS22Q9GZN4 317 aa5.63□□□□□ -1.51
VPS50-218ENST00000485994 WNT10AQ9GZT5 417 aa5.63□□□□□ -1.51
VPS50-218ENST00000485994 SPACA1Q9HBV2 294 aa5.63□□□□□ -1.51
VPS50-218ENST00000485994 TCF7L1Q9HCS4 588 aa5.63□□□□□ -1.51
VPS50-218ENST00000485994 ABCB10Q9NRK6 738 aa5.63□□□□□ -1.51
VPS50-218ENST00000485994 RCC2Q9P258 522 aaKnown RBP5.63□□□□□ -1.51
VPS50-218ENST00000485994 KIF25Q9UIL4 384 aa5.63□□□□□ -1.51
VPS50-218ENST00000485994 LSM2Q9Y333 95 aaKnown RBP5.63□□□□□ -1.51
VPS50-218ENST00000485994 TPRKBQ9Y3C4 175 aa5.63□□□□□ -1.51
VPS50-218ENST00000485994 ADARB2-AS1A8MUL3 147 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 PTGES3LE9PB15 166 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 J3QR06 171 aa5.62□□□□□ -1.51
VPS50-218ENST00000485994 TOR1AO14656 332 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms