RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 CD7P09564 240 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 SLC2A2P11168 524 aaPredicted RBP3.99□□□□□ -1.77
PTPN4-210ENST00000485247 DUSP1P28562 367 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 SLC6A6P31641 620 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 OMPP47874 163 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 REG1BP48304 166 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 GZMMP51124 257 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 RAB7AP51149 207 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 P2RX3P56373 397 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 ERVK11-1P61568 191 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 TNFRSF9Q07011 255 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 MADCAM1Q13477 382 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 EBI3Q14213 229 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 WHAMMP3Q1A5X7 153 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 AGKQ53H12 422 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 LCN12Q6JVE5 192 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 ASRGL1Q7L266 308 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 VTCN1Q7Z7D3 282 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 ANGPTL5Q86XS5 388 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 ZNF573Q86YE8 665 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 OR8H3Q8N146 312 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 Q8N6K4 173 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 ZNF645Q8N7E2 425 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 FAM86B1Q8N7N1 296 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 EIF1ADQ8N9N8 165 aaKnown RBP3.99□□□□□ -1.77
PTPN4-210ENST00000485247 OR52L1Q8NGH7 329 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 OR2T10Q8NGZ9 312 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 IFT27Q9BW83 186 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 NIPAL2Q9H841 368 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 THAP1Q9NVV9 213 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 LGALS13Q9UHV8 139 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 ZNF107Q9UII5 783 aaPredicted RBP3.99□□□□□ -1.77
PTPN4-210ENST00000485247 AMMECR1Q9Y4X0 333 aaPredicted RBP3.99□□□□□ -1.77
PTPN4-210ENST00000485247 U3KQV3 271 aa3.99□□□□□ -1.77
PTPN4-210ENST00000485247 DNAH11Q96DT5 4516 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 HSPG2P98160 4391 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 DYNC1H1Q14204 4646 aaKnown RBP3.98□□□□□ -1.77
PTPN4-210ENST00000485247 TRAV41A0A0B4J266 112 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 IGHV1-3A0A0C4DH29 117 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 FAM90A10PA6NDY2 464 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 KRTAP29-1A8MX34 341 aaPredicted RBP3.98□□□□□ -1.77
PTPN4-210ENST00000485247 J3QR06 171 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 M0R2N4 97 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 DLGAP1O14490 977 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 ATP6V0E1O15342 81 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 NDUFB8O95169 186 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 HAND1O96004 215 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 NRASP01111 189 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 H2BFMP0C1H6 154 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 FMO3P31513 532 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 PTGFRP43088 359 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 GLIPR1P48060 266 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 MRPL19P49406 292 aaKnown RBP3.98□□□□□ -1.77
PTPN4-210ENST00000485247 GNG10P50151 68 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 F2RL1P55085 397 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 SELENOWP63302 87 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 ZNF45Q02386 682 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 AESQ08117 197 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 IFFO1Q0D2I5 559 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 RIPPLY1Q0D2K3 151 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 ZNF684Q5T5D7 378 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 SLX4IPQ5VYV7 408 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 IL34Q6ZMJ4 242 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 COMMD2Q86X83 199 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 Q8N402 240 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 MNS1Q8NEH6 495 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 OR8B12Q8NGG6 310 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 OR9G4Q8NGQ1 327 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 OR6K6Q8NGW6 343 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 OR10X1Q8NGY0 326 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 OR2T4Q8NH00 348 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 FANK1Q8TC84 345 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 RNF133Q8WVZ7 376 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 AMELYQ99218 206 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 ABHD6Q9BV23 337 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 OR52D1Q9H346 318 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 PLEKHA1Q9HB21 404 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 SLC25A19Q9HC21 320 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 HEYLQ9NQ87 328 aaPredicted RBP3.98□□□□□ -1.77
PTPN4-210ENST00000485247 PARP11Q9NR21 331 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 TAS2R3Q9NYW6 316 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 IL36RNQ9UBH0 155 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 COPS3Q9UNS2 423 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 PSG11Q9UQ72 335 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 PIGLQ9Y2B2 252 aa3.98□□□□□ -1.77
PTPN4-210ENST00000485247 FAT2Q9NYQ8 4349 aa3.97□□□□□ -1.77
PTPN4-210ENST00000485247 DNAH2Q9P225 4427 aa3.97□□□□□ -1.77
PTPN4-210ENST00000485247 A0A1W2PN81 502 aa3.97□□□□□ -1.77
PTPN4-210ENST00000485247 A0A1W2PPE3 182 aa3.97□□□□□ -1.77
PTPN4-210ENST00000485247 PQLC2LA1A4F0 135 aa3.97□□□□□ -1.77
PTPN4-210ENST00000485247 C16orf90A8MZG2 172 aa3.97□□□□□ -1.77
PTPN4-210ENST00000485247 ZNF736B4DX44 427 aaPredicted RBP3.97□□□□□ -1.77
PTPN4-210ENST00000485247 HSD17B6O14756 317 aa3.97□□□□□ -1.77
PTPN4-210ENST00000485247 ANGPT2O15123 496 aa3.97□□□□□ -1.77
PTPN4-210ENST00000485247 SOX15O60248 233 aa3.97□□□□□ -1.77
PTPN4-210ENST00000485247 SNNO75324 88 aaPredicted RBP3.97□□□□□ -1.77
PTPN4-210ENST00000485247 MOSP00540 346 aa3.97□□□□□ -1.77
PTPN4-210ENST00000485247 GYPBP06028 91 aa3.97□□□□□ -1.77
PTPN4-210ENST00000485247 RBMY1A1P0DJD3 496 aaKnown RBP3.97□□□□□ -1.77
PTPN4-210ENST00000485247 CALCBP10092 127 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms