RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 ING3Q9NXR8 418 aa9.09□□□□□ -0.95
SCFD1-206ENST00000484733 PSG11Q9UQ72 335 aa9.09□□□□□ -0.95
SCFD1-206ENST00000484733 LOC100130705A0A1B0GUX0 176 aa9.09□□□□□ -0.95
SCFD1-206ENST00000484733 PSMB11A5LHX3 300 aa9.09□□□□□ -0.95
SCFD1-206ENST00000484733 SNRNP70P08621 437 aaKnown RBP9.09□□□□□ -0.95
SCFD1-206ENST00000484733 SLC6A1P30531 599 aa9.09□□□□□ -0.95
SCFD1-206ENST00000484733 EGFEM1PQ0D2K5 195 aa9.09□□□□□ -0.95
SCFD1-206ENST00000484733 MADCAM1Q13477 382 aa9.09□□□□□ -0.95
SCFD1-206ENST00000484733 EBI3Q14213 229 aa9.09□□□□□ -0.95
SCFD1-206ENST00000484733 RBM39Q14498 530 aaKnown RBP9.09□□□□□ -0.95
SCFD1-206ENST00000484733 RPL22L1Q6P5R6 122 aaKnown RBP9.09□□□□□ -0.95
SCFD1-206ENST00000484733 LINC00596Q86U02 117 aa9.09□□□□□ -0.95
SCFD1-206ENST00000484733 LINC00482Q8N8I6 264 aa9.09□□□□□ -0.95
SCFD1-206ENST00000484733 GPR148Q8TDV2 347 aa9.09□□□□□ -0.95
SCFD1-206ENST00000484733 CHPT1Q8WUD6 406 aa9.09□□□□□ -0.95
SCFD1-206ENST00000484733 RGP1Q92546 391 aaPredicted RBP9.09□□□□□ -0.95
SCFD1-206ENST00000484733 SH2D7A6NKC9 451 aaPredicted RBP9.08□□□□□ -0.96
SCFD1-206ENST00000484733 LIMS3P0CW19 117 aa9.08□□□□□ -0.96
SCFD1-206ENST00000484733 LIMS4P0CW20 117 aa9.08□□□□□ -0.96
SCFD1-206ENST00000484733 GZMHP20718 246 aa9.08□□□□□ -0.96
SCFD1-206ENST00000484733 ZNF816Q0VGE8 651 aaPredicted RBP9.08□□□□□ -0.96
SCFD1-206ENST00000484733 RSU1Q15404 277 aa9.08□□□□□ -0.96
SCFD1-206ENST00000484733 ZSCAN26Q16670 478 aa9.08□□□□□ -0.96
SCFD1-206ENST00000484733 C9orf152Q5JTZ5 239 aa9.08□□□□□ -0.96
SCFD1-206ENST00000484733 C10orf99Q6UWK7 81 aa9.08□□□□□ -0.96
SCFD1-206ENST00000484733 C5orf56Q8N8D9 126 aa9.08□□□□□ -0.96
SCFD1-206ENST00000484733 C8orf31Q8N9H6 132 aa9.08□□□□□ -0.96
SCFD1-206ENST00000484733 OR51D1Q8NGF3 324 aa9.08□□□□□ -0.96
SCFD1-206ENST00000484733 OR52M1Q8NGK5 317 aa9.08□□□□□ -0.96
SCFD1-206ENST00000484733 GPER1Q99527 375 aa9.08□□□□□ -0.96
SCFD1-206ENST00000484733 ZFP57Q9NU63 452 aa9.08□□□□□ -0.96
SCFD1-206ENST00000484733 FAM118AQ9NWS6 357 aa9.08□□□□□ -0.96
SCFD1-206ENST00000484733 K7EIL1 84 aa9.08□□□□□ -0.96
SCFD1-206ENST00000484733 CD2P06729 351 aa9.08□□□□□ -0.96
SCFD1-206ENST00000484733 RPL23AP62750 156 aaKnown RBP9.08□□□□□ -0.96
SCFD1-206ENST00000484733 SATL1Q86VE3 508 aa9.08□□□□□ -0.96
SCFD1-206ENST00000484733 LINC00311Q8N616 119 aa9.08□□□□□ -0.96
SCFD1-206ENST00000484733 COMMD1Q8N668 190 aa9.08□□□□□ -0.96
SCFD1-206ENST00000484733 DRAM1Q8N682 238 aa9.08□□□□□ -0.96
SCFD1-206ENST00000484733 SUMF2Q8NBJ7 301 aa9.08□□□□□ -0.96
SCFD1-206ENST00000484733 OR51A2Q8NGJ7 313 aa9.08□□□□□ -0.96
SCFD1-206ENST00000484733 APH1BQ8WW43 257 aa9.08□□□□□ -0.96
SCFD1-206ENST00000484733 SLC29A1Q99808 456 aa9.08□□□□□ -0.96
SCFD1-206ENST00000484733 DPCDQ9BVM2 203 aaPredicted RBP9.08□□□□□ -0.96
SCFD1-206ENST00000484733 METTL9Q9H1A3 318 aa9.08□□□□□ -0.96
SCFD1-206ENST00000484733 AMBNQ9NP70 447 aa9.08□□□□□ -0.96
SCFD1-206ENST00000484733 TAS2R4Q9NYW5 299 aa9.08□□□□□ -0.96
SCFD1-206ENST00000484733 HSPB6O14558 160 aa9.07□□□□□ -0.96
SCFD1-206ENST00000484733 OGG1O15527 345 aa9.07□□□□□ -0.96
SCFD1-206ENST00000484733 HTR3BO95264 441 aa9.07□□□□□ -0.96
SCFD1-206ENST00000484733 MPIG6BO95866 241 aa9.07□□□□□ -0.96
SCFD1-206ENST00000484733 TMEM11P17152 192 aa9.07□□□□□ -0.96
SCFD1-206ENST00000484733 PIGYQ3MUY2 71 aa9.07□□□□□ -0.96
SCFD1-206ENST00000484733 Q3ZCU0 254 aa9.07□□□□□ -0.96
SCFD1-206ENST00000484733 ETV3LQ6ZN32 361 aa9.07□□□□□ -0.96
SCFD1-206ENST00000484733 OR56B4Q8NH76 319 aa9.07□□□□□ -0.96
SCFD1-206ENST00000484733 MRGPRDQ8TDS7 321 aa9.07□□□□□ -0.96
SCFD1-206ENST00000484733 TMEM138Q9NPI0 162 aa9.07□□□□□ -0.96
SCFD1-206ENST00000484733 GPX5O75715 221 aa9.06□□□□□ -0.96
SCFD1-206ENST00000484733 IGHG2P01859 326 aa9.06□□□□□ -0.96
SCFD1-206ENST00000484733 GTF2A1P52655 376 aaPredicted RBP9.06□□□□□ -0.96
SCFD1-206ENST00000484733 RBM11P57052 281 aaKnown RBP9.06□□□□□ -0.96
SCFD1-206ENST00000484733 KRTAP10-11P60412 298 aa9.06□□□□□ -0.96
SCFD1-206ENST00000484733 MPV17LQ2QL34 196 aa9.06□□□□□ -0.96
SCFD1-206ENST00000484733 IZUMO1Q8IYV9 350 aa9.06□□□□□ -0.96
SCFD1-206ENST00000484733 OR10K1Q8NGX5 313 aa9.06□□□□□ -0.96
SCFD1-206ENST00000484733 LEAP2Q969E1 77 aa9.06□□□□□ -0.96
SCFD1-206ENST00000484733 MCRIP2Q9BUT9 160 aaKnown RBP9.06□□□□□ -0.96
SCFD1-206ENST00000484733 PAK1IP1Q9NWT1 392 aaPredicted RBP9.06□□□□□ -0.96
SCFD1-206ENST00000484733 ST3GAL6Q9Y274 331 aa9.06□□□□□ -0.96
SCFD1-206ENST00000484733 TMEM30CPA0ZSE6 113 aa9.06□□□□□ -0.96
SCFD1-206ENST00000484733 IRGMA1A4Y4 181 aa9.06□□□□□ -0.96
SCFD1-206ENST00000484733 GAPDHP04406 335 aaKnown RBP9.06□□□□□ -0.96
SCFD1-206ENST00000484733 DCKP27707 260 aa9.06□□□□□ -0.96
SCFD1-206ENST00000484733 MYCNOSP40205 109 aa9.06□□□□□ -0.96
SCFD1-206ENST00000484733 SOX2P48431 317 aa9.06□□□□□ -0.96
SCFD1-206ENST00000484733 THBS3P49746 956 aa9.06□□□□□ -0.96
SCFD1-206ENST00000484733 DIAPH2-AS1Q14236 149 aa9.06□□□□□ -0.96
SCFD1-206ENST00000484733 MRPL41Q8IXM3 137 aaKnown RBP9.06□□□□□ -0.96
SCFD1-206ENST00000484733 OR10X1Q8NGY0 326 aa9.06□□□□□ -0.96
SCFD1-206ENST00000484733 OR52N1Q8NH53 320 aa9.06□□□□□ -0.96
SCFD1-206ENST00000484733 RFESDQ8TAC1 157 aa9.06□□□□□ -0.96
SCFD1-206ENST00000484733 RDH12Q96NR8 316 aa9.06□□□□□ -0.96
SCFD1-206ENST00000484733 S100A14Q9HCY8 104 aa9.06□□□□□ -0.96
SCFD1-206ENST00000484733 ING4Q9UNL4 249 aa9.06□□□□□ -0.96
SCFD1-206ENST00000484733 C15orf65H3BRN8 121 aa9.05□□□□□ -0.96
SCFD1-206ENST00000484733 CCRL2O00421 344 aa9.05□□□□□ -0.96
SCFD1-206ENST00000484733 ORC5O43913 435 aa9.05□□□□□ -0.96
SCFD1-206ENST00000484733 ZNF780AO75290 641 aaPredicted RBP9.05□□□□□ -0.96
SCFD1-206ENST00000484733 WBP4O75554 376 aaKnown RBP9.05□□□□□ -0.96
SCFD1-206ENST00000484733 IGFBP3P17936 291 aaPredicted RBP9.05□□□□□ -0.96
SCFD1-206ENST00000484733 BDKRB2P30411 391 aa9.05□□□□□ -0.96
SCFD1-206ENST00000484733 SSTR5P35346 364 aa9.05□□□□□ -0.96
SCFD1-206ENST00000484733 KHDC1LQ5JSQ8 128 aa9.05□□□□□ -0.96
SCFD1-206ENST00000484733 TMPRSS11AQ6ZMR5 421 aa9.05□□□□□ -0.96
SCFD1-206ENST00000484733 PQLC1Q8N2U9 271 aa9.05□□□□□ -0.96
SCFD1-206ENST00000484733 Q8N6K4 173 aa9.05□□□□□ -0.96
SCFD1-206ENST00000484733 FAM192AQ9GZU8 254 aa9.05□□□□□ -0.96
SCFD1-206ENST00000484733 IGHV1-3A0A0C4DH29 117 aa9.05□□□□□ -0.96
SCFD1-206ENST00000484733 TRBV5-5A0A0J9YX44 114 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms