RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 PSG3Q16557 428 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 TMEM241Q24JQ0 296 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 ACTBL2Q562R1 376 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 NXNL2Q5VZ03 156 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 HBMQ6B0K9 141 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 LAMTOR1Q6IAA8 161 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 ERICH5Q6P6B1 374 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 FAM183BPQ6ZVS7 135 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 RBM45Q8IUH3 476 aaKnown RBP0.72□□□□□ -2.29
SCAF11-207ENST00000484275 OR8G5Q8NG78 346 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 OR8K1Q8NGG5 319 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 OR2Y1Q8NGV0 311 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 DTD1Q8TEA8 209 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 TWIST2Q8WVJ9 160 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 CACNG8Q8WXS5 425 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 CCL17Q92583 94 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 FMC1Q96HJ9 113 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 BIRC8Q96P09 236 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 APOL4Q9BPW4 351 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 SUCNR1Q9BXA5 334 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 ZNF436Q9C0F3 470 aaPredicted RBP0.72□□□□□ -2.29
SCAF11-207ENST00000484275 SLC25A31Q9H0C2 315 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 TUBA4BQ9H853 241 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 RBM12B-AS1Q9P1G2 102 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 CYB5R1Q9UHQ9 305 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 STK38LQ9Y2H1 464 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 USH1CQ9Y6N9 552 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 KIAA0232Q92628 1395 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 TRPM6Q9BX84 2022 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 TRBV24-1A0A075B6N3 115 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 IGKV1D-37A0A075B6S9 117 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 IGHV1-45A0A0A0MS14 117 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 A0A1W2PRG6 482 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 GOLGA8IPA6NC78 632 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 MGAT4DA6NG13 374 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 OR5H14A6NHG9 310 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 F8VP50 259 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 RNASEK-C17orf49H0YIS7 233 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 TMEM250H0YL14 139 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 H3BMM0 161 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 TCF21O43680 179 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 ENSAO43768 121 aaKnown RBP0.71□□□□□ -2.3
SCAF11-207ENST00000484275 PDCD6O75340 191 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 S1PR2O95136 353 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 CA2P00918 260 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 CST4P01036 141 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 GYPCP04921 128 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 CGB3P0DN86 165 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 CGB7P0DN87 165 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 PSKH1P11801 424 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 GABRA1P14867 456 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 CTLA4P16410 223 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 M6PRP20645 277 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 UGT2B10P36537 528 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 ZNF140P52738 457 aaPredicted RBP0.71□□□□□ -2.3
SCAF11-207ENST00000484275 RAB25P57735 213 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 RHOAP61586 193 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 TNNC1P63316 161 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 XIAPP98170 497 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 CD164Q04900 197 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 TRIP13Q15645 432 aaPredicted RBP0.71□□□□□ -2.3
SCAF11-207ENST00000484275 BCL2A1Q16548 175 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 FBXO48Q5FWF7 155 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 FAM162BQ5T6X4 162 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 Q6ZRU5 148 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 Q6ZT83 130 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 CLEC20AQ6ZU45 233 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 MRPL52Q86TS9 123 aaKnown RBP0.71□□□□□ -2.3
SCAF11-207ENST00000484275 SLC25A45Q8N413 288 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 TRIML2Q8N7C3 387 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 FER1L6-AS1Q8NA97 138 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 OR2K2Q8NGT1 345 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 LMX1AQ8TE12 382 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 TMEM239Q8WW34 195 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 IFT81Q8WYA0 676 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 ZNF75CPQ92670 426 aaPredicted RBP0.71□□□□□ -2.3
SCAF11-207ENST00000484275 UBE2WQ96B02 151 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 CLDN23Q96B33 292 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 CCDC124Q96CT7 223 aaKnown RBP0.71□□□□□ -2.3
SCAF11-207ENST00000484275 CMBLQ96DG6 245 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 ZMYND19Q96E35 227 aaPredicted RBP0.71□□□□□ -2.3
SCAF11-207ENST00000484275 ZNF625Q96I27 306 aaPredicted RBP0.71□□□□□ -2.3
SCAF11-207ENST00000484275 CPB2Q96IY4 423 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 LINC01587Q99440 93 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 B9D2Q9BPU9 175 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 TXNDC17Q9BRA2 123 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 SIKE1Q9BRV8 207 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 HINT2Q9BX68 163 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 TTTY12Q9BZ98 90 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 BCL2L14Q9BZR8 327 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 OR2D2Q9H210 308 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 GOLPH3Q9H4A6 298 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 POMKQ9H5K3 350 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 XKR8Q9H6D3 395 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 CLEC2DQ9UHP7 191 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 NXT1Q9UKK6 140 aaKnown RBP0.71□□□□□ -2.3
SCAF11-207ENST00000484275 RBMX2Q9Y388 322 aaKnown RBP0.71□□□□□ -2.3
SCAF11-207ENST00000484275 AMMECR1Q9Y4X0 333 aaPredicted RBP0.71□□□□□ -2.3
SCAF11-207ENST00000484275 COL4A2P08572 1712 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 NYNRINQ9P2P1 1898 aaKnown RBP0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms