RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 CSPG4Q6UVK1 2322 aa5.86□□□□□ -1.47
BRCA1-216ENST00000484087 SONP18583 2426 aaKnown RBP5.85□□□□□ -1.47
BRCA1-216ENST00000484087 MEIKINA0A087WXM9 373 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 IGKV1-12A0A0C4DH73 117 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 LRP5LA4QPB2 252 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 TMEM210A6NLX4 147 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 IQCF6A8MYZ5 107 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 MCRIP1C9JLW8 97 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 J3QT63 122 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 TIMM8AO60220 97 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-216ENST00000484087 IGKV1D-12P01611 117 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 HPXP02790 462 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 OR4E1P0C645 316 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 GSTT2P0CG29 244 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 ZNF35P13682 527 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 BCL3P20749 454 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 CHATP28329 748 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 APOBEC3AP31941 199 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-216ENST00000484087 GZMKP49863 264 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 NKX2-5P52952 324 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-216ENST00000484087 UBE2MP61081 183 aaKnown RBP5.85□□□□□ -1.47
BRCA1-216ENST00000484087 KRTAP1-1Q07627 177 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 IL24Q13007 206 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 IL13RA2Q14627 380 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 CDK10Q15131 360 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 OR8G1Q15617 311 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 MICBQ29980 383 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 PIGYQ3MUY2 71 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 NHLRC3Q5JS37 347 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 LIN54Q6MZP7 749 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 FAHD2BQ6P2I3 314 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-216ENST00000484087 CLEC9AQ6UXN8 241 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 SLC36A1Q7Z2H8 476 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 UXS1Q8NBZ7 420 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 Q8NFD4 153 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 OR11H7Q8NGC8 314 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 OR10AD1Q8NGE0 317 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 TERB2Q8NHR7 220 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 KLF14Q8TD94 323 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-216ENST00000484087 CAPSLQ8WWF8 208 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 FAHD2AQ96GK7 314 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 FAAP24Q9BTP7 215 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 ZNF436Q9C0F3 470 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-216ENST00000484087 ZNF286AQ9HBT8 521 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 CHMP1AQ9HD42 196 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-216ENST00000484087 C12orf4Q9NQ89 552 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 NECAP2Q9NVZ3 263 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 EHFQ9NZC4 300 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 AK3Q9UIJ7 227 aa5.85□□□□□ -1.47
BRCA1-216ENST00000484087 FAM172BPA6NC97 362 aa5.84□□□□□ -1.47
BRCA1-216ENST00000484087 FABP7O15540 132 aa5.84□□□□□ -1.47
BRCA1-216ENST00000484087 HLA-AP01891 365 aaKnown RBP5.84□□□□□ -1.47
BRCA1-216ENST00000484087 GIPP09681 153 aaPredicted RBP5.84□□□□□ -1.47
BRCA1-216ENST00000484087 VSIG10L2P0DP72 767 aa5.84□□□□□ -1.47
BRCA1-216ENST00000484087 PAX1P15863 534 aa5.84□□□□□ -1.47
BRCA1-216ENST00000484087 PRKACAP17612 351 aa5.84□□□□□ -1.47
BRCA1-216ENST00000484087 C4BPBP20851 252 aa5.84□□□□□ -1.47
BRCA1-216ENST00000484087 FPR2P25090 351 aa5.84□□□□□ -1.47
BRCA1-216ENST00000484087 CD34P28906 385 aa5.84□□□□□ -1.47
BRCA1-216ENST00000484087 SERPINF1P36955 418 aa5.84□□□□□ -1.47
BRCA1-216ENST00000484087 GLP1RP43220 463 aa5.84□□□□□ -1.47
BRCA1-216ENST00000484087 NPBWR2P48146 333 aa5.84□□□□□ -1.47
BRCA1-216ENST00000484087 SELENOVP59797 346 aa5.84□□□□□ -1.47
BRCA1-216ENST00000484087 RAP2BP61225 183 aa5.84□□□□□ -1.47
BRCA1-216ENST00000484087 RPS23P62266 143 aaKnown RBP5.84□□□□□ -1.47
BRCA1-216ENST00000484087 PSG7Q13046 419 aa5.84□□□□□ -1.47
BRCA1-216ENST00000484087 IKZF1Q13422 519 aa5.84□□□□□ -1.47
BRCA1-216ENST00000484087 RBM39Q14498 530 aaKnown RBP5.84□□□□□ -1.47
BRCA1-216ENST00000484087 ATPAF1Q5TC12 328 aaPredicted RBP5.84□□□□□ -1.47
BRCA1-216ENST00000484087 RGS7BPQ6MZT1 257 aaPredicted RBP5.84□□□□□ -1.47
BRCA1-216ENST00000484087 PEG10Q86TG7 708 aaKnown RBP5.84□□□□□ -1.47
BRCA1-216ENST00000484087 SLC25A42Q86VD7 318 aa5.84□□□□□ -1.47
BRCA1-216ENST00000484087 FAM58AQ8N1B3 248 aa5.84□□□□□ -1.47
BRCA1-216ENST00000484087 C12orf45Q8N5I9 185 aaPredicted RBP5.84□□□□□ -1.47
BRCA1-216ENST00000484087 OR8G5Q8NG78 346 aa5.84□□□□□ -1.47
BRCA1-216ENST00000484087 OR13C8Q8NGS7 320 aa5.84□□□□□ -1.47
BRCA1-216ENST00000484087 OR13G1Q8NGZ3 307 aa5.84□□□□□ -1.47
BRCA1-216ENST00000484087 NEK7Q8TDX7 302 aa5.84□□□□□ -1.47
BRCA1-216ENST00000484087 MARS2Q96GW9 593 aaKnown RBP5.84□□□□□ -1.47
BRCA1-216ENST00000484087 PHB2Q99623 299 aa5.84□□□□□ -1.47
BRCA1-216ENST00000484087 OR51I2Q9H344 312 aa5.84□□□□□ -1.47
BRCA1-216ENST00000484087 RIMS4Q9H426 269 aaPredicted RBP5.84□□□□□ -1.47
BRCA1-216ENST00000484087 GLS2Q9UI32 602 aa5.84□□□□□ -1.47
BRCA1-216ENST00000484087 ANXA10Q9UJ72 324 aa5.84□□□□□ -1.47
BRCA1-216ENST00000484087 PURGQ9UJV8 347 aaKnown RBP5.84□□□□□ -1.47
BRCA1-216ENST00000484087 C14orf166Q9Y224 244 aaKnown RBP5.84□□□□□ -1.47
BRCA1-216ENST00000484087 NAV3Q8IVL0 2385 aa5.84□□□□□ -1.47
BRCA1-216ENST00000484087 A0A096LNT2 108 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 INAFM1C9JVW0 142 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 F5H5P2 479 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 SYNGR1O43759 233 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 SLC22A5O76082 557 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 GLAP06280 429 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 FCGR3AP08637 254 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 PGAM2P15259 253 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 HOXB4P17483 251 aaPredicted RBP5.83□□□□□ -1.48
BRCA1-216ENST00000484087 CXCL3P19876 107 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 KITLGP21583 273 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 MPV17P39210 176 aa5.83□□□□□ -1.48
BRCA1-216ENST00000484087 GMFBP60983 142 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms