RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 ATRXP46100 2492 aa22.13■■□□□ 1.13
SHOX2-204ENST00000483851 ZZEF1O43149 2961 aa22.13■■□□□ 1.13
SHOX2-204ENST00000483851 IGHV3-64DA0A0J9YX35 117 aa22.13■■□□□ 1.13
SHOX2-204ENST00000483851 hCG_1807616A0A1W2PRN6 198 aa22.13■■□□□ 1.13
SHOX2-204ENST00000483851 FAM90A27PA6NNH2 459 aa22.13■■□□□ 1.13
SHOX2-204ENST00000483851 SRRM5B3KS81 715 aa22.13■■□□□ 1.13
SHOX2-204ENST00000483851 GLP1RP43220 463 aa22.13■■□□□ 1.13
SHOX2-204ENST00000483851 KCNJ3P48549 501 aa22.13■■□□□ 1.13
SHOX2-204ENST00000483851 ADIPOQQ15848 244 aa22.13■■□□□ 1.13
SHOX2-204ENST00000483851 CA5BP1Q8WTZ4 195 aa22.13■■□□□ 1.13
SHOX2-204ENST00000483851 DBX1A6NMT0 343 aa22.12■■□□□ 1.13
SHOX2-204ENST00000483851 TRDCB7Z8K6 153 aa22.12■■□□□ 1.13
SHOX2-204ENST00000483851 DUS4LO95620 317 aaKnown RBP22.12■■□□□ 1.13
SHOX2-204ENST00000483851 IL13RA1P78552 427 aa22.12■■□□□ 1.13
SHOX2-204ENST00000483851 LRRC29Q8WV35 223 aa22.12■■□□□ 1.13
SHOX2-204ENST00000483851 KCNJ16Q9NPI9 418 aa22.12■■□□□ 1.13
SHOX2-204ENST00000483851 HSPB6O14558 160 aa22.11■■□□□ 1.13
SHOX2-204ENST00000483851 B3GALNT1O75752 331 aa22.11■■□□□ 1.13
SHOX2-204ENST00000483851 SIRPB1O00241 398 aa22.11■■□□□ 1.13
SHOX2-204ENST00000483851 SPRY3O43610 288 aa22.11■■□□□ 1.13
SHOX2-204ENST00000483851 OR4A8P0C604 315 aa22.11■■□□□ 1.13
SHOX2-204ENST00000483851 SLC25A4P12235 298 aa22.11■■□□□ 1.13
SHOX2-204ENST00000483851 ZNF497Q6ZNH5 498 aa22.11■■□□□ 1.13
SHOX2-204ENST00000483851 PHB2Q99623 299 aa22.11■■□□□ 1.13
SHOX2-204ENST00000483851 RTBDNQ9BSG5 229 aaPredicted RBP22.11■■□□□ 1.13
SHOX2-204ENST00000483851 C14orf166Q9Y224 244 aaKnown RBP22.11■■□□□ 1.13
SHOX2-204ENST00000483851 IGHV1-46P01743 117 aa22.1■■□□□ 1.13
SHOX2-204ENST00000483851 CTSDP07339 412 aaPredicted RBP22.1■■□□□ 1.13
SHOX2-204ENST00000483851 UCP3P55916 312 aa22.1■■□□□ 1.13
SHOX2-204ENST00000483851 FGL1Q08830 312 aa22.1■■□□□ 1.13
SHOX2-204ENST00000483851 LIN54Q6MZP7 749 aa22.1■■□□□ 1.13
SHOX2-204ENST00000483851 TMEM230Q96A57 120 aa22.1■■□□□ 1.13
SHOX2-204ENST00000483851 MARVELD3Q96A59 401 aa22.1■■□□□ 1.13
SHOX2-204ENST00000483851 CD55P08174 381 aa22.09■■□□□ 1.13
SHOX2-204ENST00000483851 AKR1C4P17516 323 aa22.09■■□□□ 1.13
SHOX2-204ENST00000483851 TNFAIP6P98066 277 aaPredicted RBP22.09■■□□□ 1.13
SHOX2-204ENST00000483851 THOC7Q6I9Y2 204 aaKnown RBP22.09■■□□□ 1.13
SHOX2-204ENST00000483851 ARL6Q9H0F7 186 aa22.09■■□□□ 1.13
SHOX2-204ENST00000483851 PLCE1Q9P212 2302 aa22.09■■□□□ 1.13
SHOX2-204ENST00000483851 NKX2-6A6NCS4 301 aa22.09■■□□□ 1.13
SHOX2-204ENST00000483851 WNT9BO14905 357 aa22.09■■□□□ 1.13
SHOX2-204ENST00000483851 RP2O75695 350 aa22.09■■□□□ 1.13
SHOX2-204ENST00000483851 OR4A4PQ8NGN8 299 aa22.09■■□□□ 1.13
SHOX2-204ENST00000483851 ITLN1Q8WWA0 313 aa22.09■■□□□ 1.13
SHOX2-204ENST00000483851 PLPPR2Q96GM1 343 aa22.09■■□□□ 1.13
SHOX2-204ENST00000483851 MFFQ9GZY8 342 aa22.09■■□□□ 1.13
SHOX2-204ENST00000483851 KIF25Q9UIL4 384 aa22.09■■□□□ 1.13
SHOX2-204ENST00000483851 SHISA9B4DS77 424 aa22.08■■□□□ 1.13
SHOX2-204ENST00000483851 CCSO14618 274 aa22.08■■□□□ 1.13
SHOX2-204ENST00000483851 ATXN7O15265 892 aaPredicted RBP22.08■■□□□ 1.13
SHOX2-204ENST00000483851 LHBP01229 141 aa22.08■■□□□ 1.13
SHOX2-204ENST00000483851 TK1P04183 234 aa22.08■■□□□ 1.13
SHOX2-204ENST00000483851 CD3EP07766 207 aa22.08■■□□□ 1.13
SHOX2-204ENST00000483851 PGAM2P15259 253 aa22.08■■□□□ 1.13
SHOX2-204ENST00000483851 FCGR2CP31995 323 aa22.08■■□□□ 1.13
SHOX2-204ENST00000483851 P2RX3P56373 397 aa22.08■■□□□ 1.13
SHOX2-204ENST00000483851 ADAM5Q6NVV9 412 aa22.08■■□□□ 1.13
SHOX2-204ENST00000483851 Q8TCH9 128 aa22.08■■□□□ 1.13
SHOX2-204ENST00000483851 MOB3AQ96BX8 217 aa22.08■■□□□ 1.13
SHOX2-204ENST00000483851 OR14J1Q9UGF5 321 aa22.08■■□□□ 1.13
SHOX2-204ENST00000483851 PCDHB10Q9UN67 800 aa22.08■■□□□ 1.13
SHOX2-204ENST00000483851 PKD1L2Q7Z442 2459 aa22.08■■□□□ 1.12
SHOX2-204ENST00000483851 A0A0B4J2A0 478 aa22.07■■□□□ 1.12
SHOX2-204ENST00000483851 DIRAS3O95661 229 aa22.07■■□□□ 1.12
SHOX2-204ENST00000483851 PAX5Q02548 391 aa22.07■■□□□ 1.12
SHOX2-204ENST00000483851 BEX5Q5H9J7 111 aa22.07■■□□□ 1.12
SHOX2-204ENST00000483851 GALNT11Q8NCW6 608 aa22.07■■□□□ 1.12
SHOX2-204ENST00000483851 LIME1Q9H400 295 aa22.07■■□□□ 1.12
SHOX2-204ENST00000483851 SHPKQ9UHJ6 478 aa22.07■■□□□ 1.12
SHOX2-204ENST00000483851 WIPI2Q9Y4P8 454 aa22.07■■□□□ 1.12
SHOX2-204ENST00000483851 CHD3Q12873 2000 aaKnown RBP22.07■■□□□ 1.12
SHOX2-204ENST00000483851 C3orf80F5H4A9 247 aa22.07■■□□□ 1.12
SHOX2-204ENST00000483851 RRASP10301 218 aa22.07■■□□□ 1.12
SHOX2-204ENST00000483851 RAB14P61106 215 aa22.07■■□□□ 1.12
SHOX2-204ENST00000483851 HLA-DRB3P79483 266 aa22.07■■□□□ 1.12
SHOX2-204ENST00000483851 GSG1LQ6UXU4 331 aa22.07■■□□□ 1.12
SHOX2-204ENST00000483851 MOGAT3Q86VF5 341 aa22.07■■□□□ 1.12
SHOX2-204ENST00000483851 DMRTC2Q8IXT2 367 aaPredicted RBP22.07■■□□□ 1.12
SHOX2-204ENST00000483851 GCSAMQ8N6F7 178 aa22.07■■□□□ 1.12
SHOX2-204ENST00000483851 ANGPTL6Q8NI99 470 aa22.07■■□□□ 1.12
SHOX2-204ENST00000483851 PCNPQ8WW12 178 aaKnown RBP22.07■■□□□ 1.12
SHOX2-204ENST00000483851 MBNL3Q9NUK0 354 aaKnown RBP22.07■■□□□ 1.12
SHOX2-204ENST00000483851 VAMP1P23763 118 aa22.06■■□□□ 1.12
SHOX2-204ENST00000483851 SERPINF1P36955 418 aa22.06■■□□□ 1.12
SHOX2-204ENST00000483851 SLC35E4Q6ICL7 350 aa22.06■■□□□ 1.12
SHOX2-204ENST00000483851 C11orf87Q6NUJ2 197 aa22.06■■□□□ 1.12
SHOX2-204ENST00000483851 C20orf204Q6ZNR8 217 aa22.06■■□□□ 1.12
SHOX2-204ENST00000483851 ZNF546Q86UE3 836 aa22.06■■□□□ 1.12
SHOX2-204ENST00000483851 PLPPR1Q8TBJ4 325 aa22.06■■□□□ 1.12
SHOX2-204ENST00000483851 TNFSF18Q9UNG2 199 aa22.06■■□□□ 1.12
SHOX2-204ENST00000483851 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP22.05■■□□□ 1.12
SHOX2-204ENST00000483851 C17orf100A8MU93 164 aa22.05■■□□□ 1.12
SHOX2-204ENST00000483851 SFT2D2O95562 160 aa22.05■■□□□ 1.12
SHOX2-204ENST00000483851 SCTP09683 121 aa22.05■■□□□ 1.12
SHOX2-204ENST00000483851 ZNF728P0DKX0 622 aa22.05■■□□□ 1.12
SHOX2-204ENST00000483851 TNFRSF1AP19438 455 aa22.05■■□□□ 1.12
SHOX2-204ENST00000483851 IGSF11Q5DX21 431 aa22.05■■□□□ 1.12
SHOX2-204ENST00000483851 FAM209AQ5JX71 171 aa22.05■■□□□ 1.12
SHOX2-204ENST00000483851 ZNF808Q8N4W9 903 aaPredicted RBP22.05■■□□□ 1.12
SHOX2-204ENST00000483851 PIK3IP1Q96FE7 263 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms