RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 C14orf166Q9Y224 244 aaKnown RBP11.8□□□□□ -0.52
CLK3-204ENST00000483723 RFPL4AA6NLU0 287 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 E7EQL1 145 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 RFPL4AL1F8VTS6 287 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 GOSR2O14653 212 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 SIX6O95475 246 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 ZNF728P0DKX0 622 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 PSG2P11465 335 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 RCC1P18754 421 aaPredicted RBP11.8□□□□□ -0.52
CLK3-204ENST00000483723 DNASE1P24855 282 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 CEBPDP49716 269 aaPredicted RBP11.8□□□□□ -0.52
CLK3-204ENST00000483723 HOXA4Q00056 320 aaPredicted RBP11.8□□□□□ -0.52
CLK3-204ENST00000483723 Q5BKY6 102 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 DCAF12L2Q5VW00 463 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 ADAM5Q6NVV9 412 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 LPCAT3Q6P1A2 487 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 CLEC18BQ6UXF7 455 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 CD177Q8N6Q3 437 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 ZBTB8BQ8NAP8 495 aaPredicted RBP11.8□□□□□ -0.52
CLK3-204ENST00000483723 UXS1Q8NBZ7 420 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 OR5M8Q8NGP6 311 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 OR2T35Q8NGX2 323 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 LINC01560Q8TB33 94 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 FAM222BQ8WU58 562 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 PIK3IP1Q96FE7 263 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 WDR89Q96FK6 387 aaPredicted RBP11.8□□□□□ -0.52
CLK3-204ENST00000483723 PHB2Q99623 299 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 RSRP1Q9BUV0 290 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 GCM1Q9NP62 436 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 KCNJ16Q9NPI9 418 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 OPN4Q9UHM6 478 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 TRBV6-7A0A0A0MS04 114 aa11.79□□□□□ -0.52
CLK3-204ENST00000483723 C17orf100A8MU93 164 aa11.79□□□□□ -0.52
CLK3-204ENST00000483723 NPIPB11E5RHQ5 1161 aa11.79□□□□□ -0.52
CLK3-204ENST00000483723 RGS11O94810 467 aa11.79□□□□□ -0.52
CLK3-204ENST00000483723 ZNF205O95201 554 aa11.79□□□□□ -0.52
CLK3-204ENST00000483723 DIRAS3O95661 229 aa11.79□□□□□ -0.52
CLK3-204ENST00000483723 PPYP01298 95 aa11.79□□□□□ -0.52
CLK3-204ENST00000483723 TK1P04183 234 aa11.79□□□□□ -0.52
CLK3-204ENST00000483723 AADACP22760 399 aa11.79□□□□□ -0.52
CLK3-204ENST00000483723 TNFSF4P23510 183 aa11.79□□□□□ -0.52
CLK3-204ENST00000483723 VAMP1P23763 118 aa11.79□□□□□ -0.52
CLK3-204ENST00000483723 GRNP28799 593 aaKnown RBP11.79□□□□□ -0.52
CLK3-204ENST00000483723 PRDX2P32119 198 aa11.79□□□□□ -0.52
CLK3-204ENST00000483723 TFF3Q07654 80 aa11.79□□□□□ -0.52
CLK3-204ENST00000483723 CHIAQ9BZP6 476 aa11.79□□□□□ -0.52
CLK3-204ENST00000483723 SHARPINQ9H0F6 387 aa11.79□□□□□ -0.52
CLK3-204ENST00000483723 CLEC4MQ9H2X3 399 aaPredicted RBP11.79□□□□□ -0.52
CLK3-204ENST00000483723 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.78□□□□□ -0.52
CLK3-204ENST00000483723 FAM172BPA6NC97 362 aa11.78□□□□□ -0.52
CLK3-204ENST00000483723 CRYM-AS1A6NIL9 109 aa11.78□□□□□ -0.52
CLK3-204ENST00000483723 ZNF737O75373 536 aa11.78□□□□□ -0.52
CLK3-204ENST00000483723 CD3EP07766 207 aa11.78□□□□□ -0.52
CLK3-204ENST00000483723 NFYAP23511 347 aaPredicted RBP11.78□□□□□ -0.52
CLK3-204ENST00000483723 SERPINF1P36955 418 aa11.78□□□□□ -0.52
CLK3-204ENST00000483723 OR3A1P47881 315 aa11.78□□□□□ -0.52
CLK3-204ENST00000483723 IFITM2Q01629 132 aa11.78□□□□□ -0.52
CLK3-204ENST00000483723 COL10A1Q03692 680 aa11.78□□□□□ -0.52
CLK3-204ENST00000483723 HMGN3Q15651 99 aa11.78□□□□□ -0.52
CLK3-204ENST00000483723 SLC38A6Q8IZM9 456 aa11.78□□□□□ -0.52
CLK3-204ENST00000483723 CA5BP1Q8WTZ4 195 aa11.78□□□□□ -0.52
CLK3-204ENST00000483723 RNF7Q9UBF6 113 aa11.78□□□□□ -0.52
CLK3-204ENST00000483723 METRNQ9UJH8 293 aa11.78□□□□□ -0.52
CLK3-204ENST00000483723 RALYQ9UKM9 306 aaKnown RBP11.78□□□□□ -0.52
CLK3-204ENST00000483723 HCFC1P51610 2035 aa11.78□□□□□ -0.52
CLK3-204ENST00000483723 IGKV1D-17A0A075B6S4 117 aa11.77□□□□□ -0.52
CLK3-204ENST00000483723 TMEM30CPA0ZSE6 113 aa11.77□□□□□ -0.52
CLK3-204ENST00000483723 CD8AP01732 235 aa11.77□□□□□ -0.52
CLK3-204ENST00000483723 LOXP28300 417 aaPredicted RBP11.77□□□□□ -0.52
CLK3-204ENST00000483723 APOBEC3AP31941 199 aaPredicted RBP11.77□□□□□ -0.52
CLK3-204ENST00000483723 ATXN7L3Q14CW9 347 aaPredicted RBP11.77□□□□□ -0.52
CLK3-204ENST00000483723 EFNB3Q15768 340 aa11.77□□□□□ -0.52
CLK3-204ENST00000483723 BEX5Q5H9J7 111 aa11.77□□□□□ -0.52
CLK3-204ENST00000483723 C9orf62Q8N4C0 152 aa11.77□□□□□ -0.52
CLK3-204ENST00000483723 LILRB1Q8NHL6 650 aaPredicted RBP11.77□□□□□ -0.52
CLK3-204ENST00000483723 CASTOR1Q8WTX7 329 aa11.77□□□□□ -0.52
CLK3-204ENST00000483723 COQ2Q96H96 371 aa11.77□□□□□ -0.52
CLK3-204ENST00000483723 TRAPPC2LQ9UL33 140 aa11.77□□□□□ -0.52
CLK3-204ENST00000483723 BOLA1Q9Y3E2 137 aa11.77□□□□□ -0.52
CLK3-204ENST00000483723 SIAH2O43255 324 aa11.77□□□□□ -0.53
CLK3-204ENST00000483723 RBMXP38159 391 aaKnown RBP11.77□□□□□ -0.53
CLK3-204ENST00000483723 HERV-K104P61576 105 aa11.77□□□□□ -0.53
CLK3-204ENST00000483723 SNTB1Q13884 538 aaKnown RBP11.77□□□□□ -0.53
CLK3-204ENST00000483723 TESK1Q15569 626 aa11.77□□□□□ -0.53
CLK3-204ENST00000483723 MST1LQ2TV78 715 aa11.77□□□□□ -0.53
CLK3-204ENST00000483723 ANKRD55Q3KP44 614 aa11.77□□□□□ -0.53
CLK3-204ENST00000483723 C4orf17Q53FE4 359 aa11.77□□□□□ -0.53
CLK3-204ENST00000483723 FAM209AQ5JX71 171 aa11.77□□□□□ -0.53
CLK3-204ENST00000483723 H1FOOQ8IZA3 346 aaPredicted RBP11.77□□□□□ -0.53
CLK3-204ENST00000483723 GALNT11Q8NCW6 608 aa11.77□□□□□ -0.53
CLK3-204ENST00000483723 GALNT14Q96FL9 552 aa11.77□□□□□ -0.53
CLK3-204ENST00000483723 SNX22Q96L94 193 aa11.77□□□□□ -0.53
CLK3-204ENST00000483723 PLSCR3Q9NRY6 295 aa11.77□□□□□ -0.53
CLK3-204ENST00000483723 BET1O15155 118 aa11.76□□□□□ -0.53
CLK3-204ENST00000483723 HEXAP06865 529 aa11.76□□□□□ -0.53
CLK3-204ENST00000483723 TNFRSF1AP19438 455 aa11.76□□□□□ -0.53
CLK3-204ENST00000483723 GNRHRP30968 328 aa11.76□□□□□ -0.53
CLK3-204ENST00000483723 PIGPP57054 158 aa11.76□□□□□ -0.53
CLK3-204ENST00000483723 FXYD4P59646 89 aa11.76□□□□□ -0.53
CLK3-204ENST00000483723 RND3P61587 244 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms