RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 ERVFRD-1P60508 538 aa16.17■□□□□ 0.18
LIME1-205ENST00000480139 VBP1P61758 197 aa16.17■□□□□ 0.18
LIME1-205ENST00000480139 NCS1P62166 190 aa16.17■□□□□ 0.18
LIME1-205ENST00000480139 GUCA2AQ02747 115 aa16.17■□□□□ 0.18
LIME1-205ENST00000480139 BRICD5Q6PL45 260 aa16.17■□□□□ 0.18
LIME1-205ENST00000480139 ZNF565Q8N9K5 539 aa16.17■□□□□ 0.18
LIME1-205ENST00000480139 NAA50Q9GZZ1 169 aaKnown RBP16.17■□□□□ 0.18
LIME1-205ENST00000480139 ETAA1Q9NY74 926 aa16.17■□□□□ 0.18
LIME1-205ENST00000480139 HSF4Q9ULV5 492 aa16.17■□□□□ 0.18
LIME1-205ENST00000480139 A0A0B4J203 849 aa16.16■□□□□ 0.18
LIME1-205ENST00000480139 ZNF729A6NN14 1252 aaPredicted RBP16.16■□□□□ 0.18
LIME1-205ENST00000480139 CLPXO76031 633 aa16.16■□□□□ 0.18
LIME1-205ENST00000480139 CGB3P0DN86 165 aa16.16■□□□□ 0.18
LIME1-205ENST00000480139 CGB7P0DN87 165 aa16.16■□□□□ 0.18
LIME1-205ENST00000480139 BLVRBP30043 206 aaPredicted RBP16.16■□□□□ 0.18
LIME1-205ENST00000480139 TUSC1Q2TAM9 212 aa16.16■□□□□ 0.18
LIME1-205ENST00000480139 LHX4Q969G2 390 aa16.16■□□□□ 0.18
LIME1-205ENST00000480139 SLC25A46Q96AG3 418 aa16.16■□□□□ 0.18
LIME1-205ENST00000480139 BCL7BQ9BQE9 202 aa16.16■□□□□ 0.18
LIME1-205ENST00000480139 LINC00574Q9H8X3 128 aa16.16■□□□□ 0.18
LIME1-205ENST00000480139 ETV7Q9Y603 341 aa16.16■□□□□ 0.18
LIME1-205ENST00000480139 IGHV1-69DA0A0B4J2H0 117 aa16.15■□□□□ 0.18
LIME1-205ENST00000480139 METTL21EPA6NDL7 271 aa16.15■□□□□ 0.18
LIME1-205ENST00000480139 RNASEK-C17orf49H0YIS7 233 aa16.15■□□□□ 0.18
LIME1-205ENST00000480139 SOCS1O15524 211 aa16.15■□□□□ 0.18
LIME1-205ENST00000480139 IGHV1-69P01742 117 aa16.15■□□□□ 0.18
LIME1-205ENST00000480139 MT-ND4P03905 459 aa16.15■□□□□ 0.18
LIME1-205ENST00000480139 IGHV1-8P0DP01 117 aa16.15■□□□□ 0.18
LIME1-205ENST00000480139 FPR2P25090 351 aa16.15■□□□□ 0.18
LIME1-205ENST00000480139 SERPINB10P48595 397 aa16.15■□□□□ 0.18
LIME1-205ENST00000480139 VEGFCP49767 419 aa16.15■□□□□ 0.18
LIME1-205ENST00000480139 UBE2E1P51965 193 aa16.15■□□□□ 0.18
LIME1-205ENST00000480139 EFNB2P52799 333 aa16.15■□□□□ 0.18
LIME1-205ENST00000480139 RIPPLY3P57055 190 aa16.15■□□□□ 0.18
LIME1-205ENST00000480139 PLA2G7Q13093 441 aa16.15■□□□□ 0.18
LIME1-205ENST00000480139 NKAPLQ5M9Q1 402 aa16.15■□□□□ 0.18
LIME1-205ENST00000480139 IDNKQ5T6J7 187 aa16.15■□□□□ 0.18
LIME1-205ENST00000480139 HEPN1Q6WQI6 88 aa16.15■□□□□ 0.18
LIME1-205ENST00000480139 C6orf201Q7Z4U5 140 aa16.15■□□□□ 0.18
LIME1-205ENST00000480139 OR13A1Q8NGR1 328 aa16.15■□□□□ 0.18
LIME1-205ENST00000480139 LGALS14Q8TCE9 139 aa16.15■□□□□ 0.18
LIME1-205ENST00000480139 SULT4A1Q9BR01 284 aa16.15■□□□□ 0.18
LIME1-205ENST00000480139 HEXA-AS1Q9H8Q6 139 aa16.15■□□□□ 0.18
LIME1-205ENST00000480139 ING3Q9NXR8 418 aa16.15■□□□□ 0.18
LIME1-205ENST00000480139 ABRACLQ9P1F3 81 aa16.15■□□□□ 0.18
LIME1-205ENST00000480139 ZFHX3Q15911 3703 aa16.15■□□□□ 0.18
LIME1-205ENST00000480139 KBTBD11-OT1A0A1B0GTJ5 212 aa16.14■□□□□ 0.17
LIME1-205ENST00000480139 MEX3AA1L020 520 aaKnown RBP16.14■□□□□ 0.17
LIME1-205ENST00000480139 SNRPBP14678 240 aaKnown RBP16.14■□□□□ 0.17
LIME1-205ENST00000480139 TMBIM6P55061 237 aa16.14■□□□□ 0.17
LIME1-205ENST00000480139 TMEM50BP56557 158 aa16.14■□□□□ 0.17
LIME1-205ENST00000480139 HCP5Q6MZN7 132 aa16.14■□□□□ 0.17
LIME1-205ENST00000480139 USP43Q70EL4 1123 aa16.14■□□□□ 0.17
LIME1-205ENST00000480139 RAB2BQ8WUD1 216 aa16.14■□□□□ 0.17
LIME1-205ENST00000480139 PLEKHJ1Q9NW61 149 aa16.14■□□□□ 0.17
LIME1-205ENST00000480139 ZNF69Q9UC07 566 aa16.14■□□□□ 0.17
LIME1-205ENST00000480139 KIAA2026Q5HYC2 2103 aa16.13■□□□□ 0.17
LIME1-205ENST00000480139 UBE2QL1A1L167 161 aa16.13■□□□□ 0.17
LIME1-205ENST00000480139 RAB27BO00194 218 aa16.13■□□□□ 0.17
LIME1-205ENST00000480139 SCGNO76038 276 aa16.13■□□□□ 0.17
LIME1-205ENST00000480139 GZMHP20718 246 aa16.13■□□□□ 0.17
LIME1-205ENST00000480139 GLP1RP43220 463 aa16.13■□□□□ 0.17
LIME1-205ENST00000480139 C17orf58Q2M2W7 97 aa16.13■□□□□ 0.17
LIME1-205ENST00000480139 CLVS1Q8IUQ0 354 aaPredicted RBP16.13■□□□□ 0.17
LIME1-205ENST00000480139 DYRK2Q92630 601 aa16.13■□□□□ 0.17
LIME1-205ENST00000480139 KCTD12Q96CX2 325 aaKnown RBP16.13■□□□□ 0.17
LIME1-205ENST00000480139 FAAP24Q9BTP7 215 aa16.13■□□□□ 0.17
LIME1-205ENST00000480139 MS4A7Q9GZW8 240 aaPredicted RBP16.13■□□□□ 0.17
LIME1-205ENST00000480139 CALYQ9NYX4 217 aa16.13■□□□□ 0.17
LIME1-205ENST00000480139 SESN1Q9Y6P5 492 aa16.13■□□□□ 0.17
LIME1-205ENST00000480139 IGHV3OR16-10A0A075B7F0 116 aa16.12■□□□□ 0.17
LIME1-205ENST00000480139 POM121CA8CG34 1229 aa16.12■□□□□ 0.17
LIME1-205ENST00000480139 NPIPB11E5RHQ5 1161 aa16.12■□□□□ 0.17
LIME1-205ENST00000480139 ORC5O43913 435 aa16.12■□□□□ 0.17
LIME1-205ENST00000480139 PAHP00439 452 aa16.12■□□□□ 0.17
LIME1-205ENST00000480139 IFNA2P01563 188 aa16.12■□□□□ 0.17
LIME1-205ENST00000480139 DLX1P56177 255 aa16.12■□□□□ 0.17
LIME1-205ENST00000480139 KLRD1Q13241 179 aa16.12■□□□□ 0.17
LIME1-205ENST00000480139 PLAC9Q5JTB6 97 aa16.12■□□□□ 0.17
LIME1-205ENST00000480139 OR52W1Q6IF63 320 aa16.12■□□□□ 0.17
LIME1-205ENST00000480139 TRAT1Q6PIZ9 186 aa16.12■□□□□ 0.17
LIME1-205ENST00000480139 BRD3OSQ6XYD6 125 aa16.12■□□□□ 0.17
LIME1-205ENST00000480139 ZNF782Q6ZMW2 699 aaPredicted RBP16.12■□□□□ 0.17
LIME1-205ENST00000480139 Q6ZTK2 550 aa16.12■□□□□ 0.17
LIME1-205ENST00000480139 ZNF554Q86TJ5 538 aa16.12■□□□□ 0.17
LIME1-205ENST00000480139 OR10A7Q8NGE5 316 aa16.12■□□□□ 0.17
LIME1-205ENST00000480139 OR13D1Q8NGV5 346 aa16.12■□□□□ 0.17
LIME1-205ENST00000480139 OR10R2Q8NGX6 335 aa16.12■□□□□ 0.17
LIME1-205ENST00000480139 MRGPRDQ8TDS7 321 aa16.12■□□□□ 0.17
LIME1-205ENST00000480139 ARHGAP5-AS1Q96IT6 56 aa16.12■□□□□ 0.17
LIME1-205ENST00000480139 PECRQ9BY49 303 aa16.12■□□□□ 0.17
LIME1-205ENST00000480139 RIMS4Q9H426 269 aaPredicted RBP16.12■□□□□ 0.17
LIME1-205ENST00000480139 MBNL3Q9NUK0 354 aaKnown RBP16.12■□□□□ 0.17
LIME1-205ENST00000480139 SPATA2Q9UM82 520 aa16.12■□□□□ 0.17
LIME1-205ENST00000480139 NAPSAO96009 420 aa16.11■□□□□ 0.17
LIME1-205ENST00000480139 CDK2P24941 298 aa16.11■□□□□ 0.17
LIME1-205ENST00000480139 DYNC1I2Q13409 638 aaKnown RBP16.11■□□□□ 0.17
LIME1-205ENST00000480139 ARL6IP1Q15041 203 aa16.11■□□□□ 0.17
LIME1-205ENST00000480139 MIDNQ504T8 468 aa16.11■□□□□ 0.17
LIME1-205ENST00000480139 C6orf183Q5T699 404 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms