RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 PP6455Q8WZ26 134 aa13.36□□□□□ -0.27
HMGN1-212ENST00000479586 ADAT3Q96EY9 351 aaPredicted RBP13.36□□□□□ -0.27
HMGN1-212ENST00000479586 OR51J1Q9H342 316 aa13.36□□□□□ -0.27
HMGN1-212ENST00000479586 GHITMQ9H3K2 345 aa13.36□□□□□ -0.27
HMGN1-212ENST00000479586 KRT84Q9NSB2 600 aa13.36□□□□□ -0.27
HMGN1-212ENST00000479586 TVP23BQ9NYZ1 205 aa13.36□□□□□ -0.27
HMGN1-212ENST00000479586 ACTR3BQ9P1U1 418 aa13.36□□□□□ -0.27
HMGN1-212ENST00000479586 KIAA1456Q9P272 454 aa13.36□□□□□ -0.27
HMGN1-212ENST00000479586 ZNF580Q9UK33 172 aa13.36□□□□□ -0.27
HMGN1-212ENST00000479586 KIAA1109Q2LD37 5005 aa13.36□□□□□ -0.27
HMGN1-212ENST00000479586 LOC107986453A0A1B0GWG9 222 aa13.35□□□□□ -0.27
HMGN1-212ENST00000479586 NPIPB11E5RHQ5 1161 aa13.35□□□□□ -0.27
HMGN1-212ENST00000479586 ZNF670-ZNF695F2Z2N8 137 aa13.35□□□□□ -0.27
HMGN1-212ENST00000479586 DEGS1O15121 323 aa13.35□□□□□ -0.27
HMGN1-212ENST00000479586 OR8U9P0C7N5 309 aa13.35□□□□□ -0.27
HMGN1-212ENST00000479586 C21orf33P30042 268 aaPredicted RBP13.35□□□□□ -0.27
HMGN1-212ENST00000479586 CDK5R1Q15078 307 aa13.35□□□□□ -0.27
HMGN1-212ENST00000479586 YIPF7Q8N8F6 280 aa13.35□□□□□ -0.27
HMGN1-212ENST00000479586 SPACA5Q96QH8 159 aa13.35□□□□□ -0.27
HMGN1-212ENST00000479586 ADI1Q9BV57 179 aa13.35□□□□□ -0.27
HMGN1-212ENST00000479586 ADGRL4Q9HBW9 690 aa13.35□□□□□ -0.27
HMGN1-212ENST00000479586 SLC25A19Q9HC21 320 aa13.35□□□□□ -0.27
HMGN1-212ENST00000479586 RETNQ9HD89 108 aa13.35□□□□□ -0.27
HMGN1-212ENST00000479586 ZNF107Q9UII5 783 aaPredicted RBP13.35□□□□□ -0.27
HMGN1-212ENST00000479586 KMT2AQ03164 3969 aa13.35□□□□□ -0.27
HMGN1-212ENST00000479586 TRAV39A0A0B4J263 110 aa13.34□□□□□ -0.27
HMGN1-212ENST00000479586 LINC01619G3V211 115 aa13.34□□□□□ -0.27
HMGN1-212ENST00000479586 IGLV1-40P01703 118 aa13.34□□□□□ -0.27
HMGN1-212ENST00000479586 SLC2A2P11168 524 aaPredicted RBP13.34□□□□□ -0.27
HMGN1-212ENST00000479586 ATF1P18846 271 aa13.34□□□□□ -0.27
HMGN1-212ENST00000479586 PRKACBP22694 351 aa13.34□□□□□ -0.27
HMGN1-212ENST00000479586 CD1BP29016 333 aa13.34□□□□□ -0.27
HMGN1-212ENST00000479586 MTNR1BP49286 362 aa13.34□□□□□ -0.27
HMGN1-212ENST00000479586 HS3ST5Q8IZT8 346 aa13.34□□□□□ -0.27
HMGN1-212ENST00000479586 RDH10Q8IZV5 341 aa13.34□□□□□ -0.27
HMGN1-212ENST00000479586 IL17DQ8TAD2 202 aa13.34□□□□□ -0.27
HMGN1-212ENST00000479586 LINC00476Q8WZB0 136 aa13.34□□□□□ -0.27
HMGN1-212ENST00000479586 EME1Q96AY2 570 aa13.34□□□□□ -0.27
HMGN1-212ENST00000479586 C10orf35Q96D05 121 aa13.34□□□□□ -0.27
HMGN1-212ENST00000479586 CLN6Q9NWW5 311 aa13.34□□□□□ -0.27
HMGN1-212ENST00000479586 HECTD4Q9Y4D8 3996 aa13.33□□□□□ -0.27
HMGN1-212ENST00000479586 IGHV4OR15-8A0A075B7B6 117 aa13.33□□□□□ -0.28
HMGN1-212ENST00000479586 A0A087WW49 117 aa13.33□□□□□ -0.28
HMGN1-212ENST00000479586 HSPA12AO43301 675 aa13.33□□□□□ -0.28
HMGN1-212ENST00000479586 KRT8P05787 483 aa13.33□□□□□ -0.28
HMGN1-212ENST00000479586 ARSBP15848 533 aa13.33□□□□□ -0.28
HMGN1-212ENST00000479586 RAB9AP51151 201 aa13.33□□□□□ -0.28
HMGN1-212ENST00000479586 FAM98BQ52LJ0 330 aaKnown RBP13.33□□□□□ -0.28
HMGN1-212ENST00000479586 SLC16A12Q6ZSM3 486 aa13.33□□□□□ -0.28
HMGN1-212ENST00000479586 DEFB107AQ8IZN7 70 aa13.33□□□□□ -0.28
HMGN1-212ENST00000479586 PRSS35Q8N3Z0 413 aa13.33□□□□□ -0.28
HMGN1-212ENST00000479586 CCDC54Q8NEL0 328 aa13.33□□□□□ -0.28
HMGN1-212ENST00000479586 OR8H1Q8NGG4 311 aa13.33□□□□□ -0.28
HMGN1-212ENST00000479586 RTN4IP1Q8WWV3 396 aaPredicted RBP13.33□□□□□ -0.28
HMGN1-212ENST00000479586 OPALINQ96PE5 141 aa13.33□□□□□ -0.28
HMGN1-212ENST00000479586 OR4C12Q96R67 309 aa13.33□□□□□ -0.28
HMGN1-212ENST00000479586 MNTQ99583 582 aa13.33□□□□□ -0.28
HMGN1-212ENST00000479586 TBX5Q99593 518 aa13.33□□□□□ -0.28
HMGN1-212ENST00000479586 TEX12Q9BXU0 123 aa13.33□□□□□ -0.28
HMGN1-212ENST00000479586 FAM90A10PA6NDY2 464 aa13.32□□□□□ -0.28
HMGN1-212ENST00000479586 H0YJX3 145 aa13.32□□□□□ -0.28
HMGN1-212ENST00000479586 M0R129 80 aa13.32□□□□□ -0.28
HMGN1-212ENST00000479586 ATP6V0E1O15342 81 aa13.32□□□□□ -0.28
HMGN1-212ENST00000479586 PRKYO43930 277 aa13.32□□□□□ -0.28
HMGN1-212ENST00000479586 PITPNAQ00169 270 aa13.32□□□□□ -0.28
HMGN1-212ENST00000479586 GK3PQ14409 553 aa13.32□□□□□ -0.28
HMGN1-212ENST00000479586 PAN3Q58A45 887 aaKnown RBP13.32□□□□□ -0.28
HMGN1-212ENST00000479586 RSBN1Q5VWQ0 802 aaPredicted RBP13.32□□□□□ -0.28
HMGN1-212ENST00000479586 OR10A7Q8NGE5 316 aa13.32□□□□□ -0.28
HMGN1-212ENST00000479586 PLPPR1Q8TBJ4 325 aa13.32□□□□□ -0.28
HMGN1-212ENST00000479586 FAM110AQ9BQ89 295 aa13.32□□□□□ -0.28
HMGN1-212ENST00000479586 CHCHD6Q9BRQ6 235 aa13.32□□□□□ -0.28
HMGN1-212ENST00000479586 TOLLIPQ9H0E2 274 aa13.32□□□□□ -0.28
HMGN1-212ENST00000479586 NCOR1P1Q9H4R4 102 aa13.32□□□□□ -0.28
HMGN1-212ENST00000479586 ZNF556Q9HAH1 456 aa13.32□□□□□ -0.28
HMGN1-212ENST00000479586 NEK6Q9HC98 313 aa13.32□□□□□ -0.28
HMGN1-212ENST00000479586 TPSG1Q9NRR2 321 aa13.32□□□□□ -0.28
HMGN1-212ENST00000479586 CHCHD3Q9NX63 227 aaKnown RBP13.32□□□□□ -0.28
HMGN1-212ENST00000479586 DNAH10Q8IVF4 4471 aa13.32□□□□□ -0.28
HMGN1-212ENST00000479586 TRAV24A0A0B4J272 114 aa13.31□□□□□ -0.28
HMGN1-212ENST00000479586 CST1P01037 141 aa13.31□□□□□ -0.28
HMGN1-212ENST00000479586 PRKACGP22612 351 aa13.31□□□□□ -0.28
HMGN1-212ENST00000479586 KIR3DL2P43630 455 aa13.31□□□□□ -0.28
HMGN1-212ENST00000479586 UTS2BQ765I0 119 aa13.31□□□□□ -0.28
HMGN1-212ENST00000479586 DDB2Q92466 427 aa13.31□□□□□ -0.28
HMGN1-212ENST00000479586 SPSB1Q96BD6 273 aa13.31□□□□□ -0.28
HMGN1-212ENST00000479586 FGGYQ96C11 551 aa13.31□□□□□ -0.28
HMGN1-212ENST00000479586 PARP11Q9NR21 331 aa13.31□□□□□ -0.28
HMGN1-212ENST00000479586 IGLV1-51P01701 117 aa13.3□□□□□ -0.28
HMGN1-212ENST00000479586 GALEQ14376 348 aa13.3□□□□□ -0.28
HMGN1-212ENST00000479586 SPATS1Q496A3 300 aa13.3□□□□□ -0.28
HMGN1-212ENST00000479586 CASTOR1Q8WTX7 329 aa13.3□□□□□ -0.28
HMGN1-212ENST00000479586 ZCCHC4Q9H5U6 513 aa13.3□□□□□ -0.28
HMGN1-212ENST00000479586 RHOFQ9HBH0 211 aa13.3□□□□□ -0.28
HMGN1-212ENST00000479586 MYRFQ9Y2G1 1151 aa13.3□□□□□ -0.28
HMGN1-212ENST00000479586 TRAV41A0A0B4J266 112 aa13.29□□□□□ -0.28
HMGN1-212ENST00000479586 METTL15A6NJ78 407 aa13.29□□□□□ -0.28
HMGN1-212ENST00000479586 C12orf77C9JDV5 145 aa13.29□□□□□ -0.28
HMGN1-212ENST00000479586 LY6G6CO95867 125 aa13.29□□□□□ -0.28
HMGN1-212ENST00000479586 LGALS1P09382 135 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms