RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 GLAP06280 429 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 IRF2P14316 349 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 ZNF44P15621 663 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 PRSS3P35030 304 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 CEBPDP49716 269 aaPredicted RBP5.55□□□□□ -1.52
USP48-208ENST00000479177 GNG2P59768 71 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 MRPS11P82912 194 aaKnown RBP5.55□□□□□ -1.52
USP48-208ENST00000479177 SSBP1Q04837 148 aaKnown RBP5.55□□□□□ -1.52
USP48-208ENST00000479177 FAM201AQ5SY85 155 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 ATAD3CQ5T2N8 411 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 TEX36Q5VZQ5 186 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 STUMQ69YW2 141 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 TRAPPC6BQ86SZ2 158 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 C1orf87Q8N0U7 546 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 BOLLQ8N9W6 283 aaKnown RBP5.55□□□□□ -1.52
USP48-208ENST00000479177 SUMF2Q8NBJ7 301 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 ANGPTL6Q8NI99 470 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 FCAMRQ8WWV6 532 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 CFHR4Q92496 578 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 DYRK2Q92630 601 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 C14orf79Q96F83 325 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 WWC2-AS2Q96NR7 200 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 THAP7Q9BT49 309 aaPredicted RBP5.55□□□□□ -1.52
USP48-208ENST00000479177 RAB1BQ9H0U4 201 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 SEBOXQ9HB31 216 aaPredicted RBP5.55□□□□□ -1.52
USP48-208ENST00000479177 PLEKHJ1Q9NW61 149 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 TREM2Q9NZC2 230 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 DNAJB11Q9UBS4 358 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 MTFP1Q9UDX5 166 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 OR14J1Q9UGF5 321 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 AK3Q9UIJ7 227 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 TBC1D24Q9ULP9 559 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 MALRD1Q5VYJ5 2156 aa5.55□□□□□ -1.52
USP48-208ENST00000479177 DSCAML1Q8TD84 2053 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 MED13LQ71F56 2210 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 UBE2QL1A1L167 161 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 MEIS3P1A6NDR6 274 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 RFPL4AA6NLU0 287 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 OR2AT4A6NND4 320 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 RFPL4AL1F8VTS6 287 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 HSPB6O14558 160 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 DEGS1O15121 323 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 ORC5O43913 435 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 ZNF737O75373 536 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 LY6HO94772 140 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 PSG2P11465 335 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 MUC1P15941 1255 aaPredicted RBP5.54□□□□□ -1.52
USP48-208ENST00000479177 LMO1P25800 156 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 RCVRNP35243 200 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 CDKN1AP38936 164 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 OR3A1P47881 315 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 ACTBP60709 375 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 ACTG1P63261 375 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 ASAH1Q13510 395 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 ARFRP1Q13795 201 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 KLF9Q13886 244 aaPredicted RBP5.54□□□□□ -1.52
USP48-208ENST00000479177 HFEQ30201 348 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 PAN3Q58A45 887 aaKnown RBP5.54□□□□□ -1.52
USP48-208ENST00000479177 SHEQ5VZ18 495 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 Q6ZPA2 131 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 DCDC5Q6ZRR9 648 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 THNSL2Q86YJ6 484 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 CD177Q8N6Q3 437 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 C19orf18Q8NEA5 215 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 OR5AN1Q8NGI8 311 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 PLPPR1Q8TBJ4 325 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 NEU4Q8WWR8 484 aaPredicted RBP5.54□□□□□ -1.52
USP48-208ENST00000479177 CCL17Q92583 94 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 RDH5Q92781 318 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 NEIL1Q96FI4 390 aaPredicted RBP5.54□□□□□ -1.52
USP48-208ENST00000479177 SDSLQ96GA7 329 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 GAFA1Q96PS6 74 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 CCL19Q99731 98 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 HDHD3Q9BSH5 251 aaPredicted RBP5.54□□□□□ -1.52
USP48-208ENST00000479177 FAAP24Q9BTP7 215 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 DPCDQ9BVM2 203 aaPredicted RBP5.54□□□□□ -1.52
USP48-208ENST00000479177 C12orf4Q9NQ89 552 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 KLK11Q9UBX7 282 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 GLS2Q9UI32 602 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 ZNF107Q9UII5 783 aaPredicted RBP5.54□□□□□ -1.52
USP48-208ENST00000479177 TMA7Q9Y2S6 64 aaKnown RBP5.54□□□□□ -1.52
USP48-208ENST00000479177 KIAA2026Q5HYC2 2103 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 ABCA2Q9BZC7 2435 aa5.54□□□□□ -1.52
USP48-208ENST00000479177 ITPR3Q14573 2671 aa5.53□□□□□ -1.52
USP48-208ENST00000479177 PPIAL4EA0A075B759 164 aa5.53□□□□□ -1.52
USP48-208ENST00000479177 TRBV6-6A0A0A6YYG2 114 aa5.53□□□□□ -1.52
USP48-208ENST00000479177 TRAV38-1A0A0B4J264 116 aa5.53□□□□□ -1.52
USP48-208ENST00000479177 A0A1B0GW55 424 aa5.53□□□□□ -1.52
USP48-208ENST00000479177 ANKRD20A5PA0PJZ0 165 aa5.53□□□□□ -1.52
USP48-208ENST00000479177 ISPDA4D126 451 aa5.53□□□□□ -1.52
USP48-208ENST00000479177 NKX6-3A6NJ46 265 aa5.53□□□□□ -1.52
USP48-208ENST00000479177 MCRIP1C9JLW8 97 aa5.53□□□□□ -1.52
USP48-208ENST00000479177 PPIAL4DF5H284 164 aa5.53□□□□□ -1.52
USP48-208ENST00000479177 LYNX1G3V0Z9 82 aa5.53□□□□□ -1.52
USP48-208ENST00000479177 SIGLEC5O15389 551 aa5.53□□□□□ -1.52
USP48-208ENST00000479177 PLA2G10O15496 165 aa5.53□□□□□ -1.52
USP48-208ENST00000479177 RBBP9O75884 186 aa5.53□□□□□ -1.52
USP48-208ENST00000479177 FSTL3O95633 263 aa5.53□□□□□ -1.52
USP48-208ENST00000479177 NAPSAO96009 420 aa5.53□□□□□ -1.52
USP48-208ENST00000479177 IGHV2-70P01814 119 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms