RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 TMEM251Q8N6I4 163 aa2.61□□□□□ -1.99
CDC42BPA-212ENST00000478573 NATD1Q8N6N6 113 aa2.61□□□□□ -1.99
CDC42BPA-212ENST00000478573 ZNF321PQ8N8H1 164 aa2.61□□□□□ -1.99
CDC42BPA-212ENST00000478573 ZNF615Q8N8J6 731 aa2.61□□□□□ -1.99
CDC42BPA-212ENST00000478573 OR4A4PQ8NGN8 299 aa2.61□□□□□ -1.99
CDC42BPA-212ENST00000478573 FAM81AQ8TBF8 368 aa2.61□□□□□ -1.99
CDC42BPA-212ENST00000478573 SFXN5Q8TD22 340 aa2.61□□□□□ -1.99
CDC42BPA-212ENST00000478573 CD300LFQ8TDQ1 290 aa2.61□□□□□ -1.99
CDC42BPA-212ENST00000478573 C16orf78Q8WTQ4 265 aa2.61□□□□□ -1.99
CDC42BPA-212ENST00000478573 C10orf82Q8WW14 230 aa2.61□□□□□ -1.99
CDC42BPA-212ENST00000478573 GEMIN6Q8WXD5 167 aaKnown RBP2.61□□□□□ -1.99
CDC42BPA-212ENST00000478573 ZNF75CPQ92670 426 aaPredicted RBP2.61□□□□□ -1.99
CDC42BPA-212ENST00000478573 HGDQ93099 445 aa2.61□□□□□ -1.99
CDC42BPA-212ENST00000478573 TM4SF18Q96CE8 201 aa2.61□□□□□ -1.99
CDC42BPA-212ENST00000478573 ASB9Q96DX5 294 aa2.61□□□□□ -1.99
CDC42BPA-212ENST00000478573 ZNF681Q96N22 645 aa2.61□□□□□ -1.99
CDC42BPA-212ENST00000478573 ZFP3Q96NJ6 502 aa2.61□□□□□ -1.99
CDC42BPA-212ENST00000478573 TSSK3Q96PN8 268 aa2.61□□□□□ -1.99
CDC42BPA-212ENST00000478573 P2RX4Q99571 388 aa2.61□□□□□ -1.99
CDC42BPA-212ENST00000478573 SLC29A1Q99808 456 aa2.61□□□□□ -1.99
CDC42BPA-212ENST00000478573 LCE3DQ9BYE3 92 aa2.61□□□□□ -1.99
CDC42BPA-212ENST00000478573 MRPL37Q9BZE1 423 aaKnown RBP2.61□□□□□ -1.99
CDC42BPA-212ENST00000478573 Q9H521 79 aa2.61□□□□□ -1.99
CDC42BPA-212ENST00000478573 GEMIN7Q9H840 131 aaKnown RBP2.61□□□□□ -1.99
CDC42BPA-212ENST00000478573 TMEM165Q9HC07 324 aa2.61□□□□□ -1.99
CDC42BPA-212ENST00000478573 C8orf4Q9NR00 106 aa2.61□□□□□ -1.99
CDC42BPA-212ENST00000478573 TAS2R7Q9NYW3 318 aa2.61□□□□□ -1.99
CDC42BPA-212ENST00000478573 WIF1Q9Y5W5 379 aa2.61□□□□□ -1.99
CDC42BPA-212ENST00000478573 ZNF780BQ9Y6R6 833 aa2.61□□□□□ -1.99
CDC42BPA-212ENST00000478573 HRNRQ86YZ3 2850 aaPredicted RBP2.61□□□□□ -1.99
CDC42BPA-212ENST00000478573 CELSR2Q9HCU4 2923 aa2.61□□□□□ -1.99
CDC42BPA-212ENST00000478573 PLCE1Q9P212 2302 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 DCHS2Q6V1P9 2916 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 MYO9AB2RTY4 2548 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 ABCA4P78363 2273 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 IGLV3-32A0A0A0MS00 114 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 TRGV5A0A0B4J1U4 118 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 A0A0G2JMM0 328 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 GOLGA8QA0A0J9YX86 632 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 A0A1W2PPB8 328 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 GNG14A0A1W2PPG7 69 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 A0A1W2PRS3 328 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 A6NDX4 124 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 FAM166BA8MTA8 275 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 KIR3DP1A8MWS1 328 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 TMEM114B3SHH9 223 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 GOLGA8RI6L899 631 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 UBFD1O14562 309 aaKnown RBP2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 AIM2O14862 343 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 CASQ2O14958 399 aaPredicted RBP2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 AZIN1O14977 448 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 PPP1R2P9O14990 202 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 LSM1O15116 133 aaKnown RBP2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 SCAMP2O15127 329 aaKnown RBP2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 CDC40O60508 579 aaKnown RBP eCLIP2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 UTS2O95399 124 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 IGLV2-23P01705 113 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 FGF4P08620 206 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 PSG2P11465 335 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 PRPS2P11908 318 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 COX6B1P14854 86 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 OMGP23515 440 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 IL12BP29460 328 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 MPIP34949 423 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 NMUP48645 174 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 DNASE1L1P49184 302 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 CDK9P50750 372 aaKnown RBP2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 RAB9AP51151 201 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 PSMD7P51665 324 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 XKP51811 444 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 ZNF133P52736 654 aaPredicted RBP2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 PSMD4P55036 377 aaKnown RBP2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 RPL38P63173 70 aaKnown RBP2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 HMGCS1Q01581 520 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 MERTKQ12866 999 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 CLINT1Q14677 625 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 MRPL23Q16540 153 aaKnown RBP2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 FBXL19-AS1Q494R0 122 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 ZBED5Q49AG3 693 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 C1orf185Q5T7R7 199 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 METTL21CQ5VZV1 264 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 CYB5R2Q6BCY4 276 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 REEP3Q6NUK4 255 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 ZFP1Q6P2D0 407 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 NPSR1Q6W5P4 371 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 PP632Q6XCG6 107 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 DGAT2L6Q6ZPD8 337 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 RPS27LQ71UM5 84 aaKnown RBP2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 SLC16A14Q7RTX9 510 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 DOLPP1Q86YN1 238 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 C10orf107Q8IVU9 208 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 C4orf33Q8N1A6 199 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 Q8N9W7 124 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 CCDC54Q8NEL0 328 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 OR52R1Q8NGF1 315 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 TWIST2Q8WVJ9 160 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 NRGNQ92686 78 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 DGCR14Q96DF8 476 aaKnown RBP2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 PPP3R2Q96LZ3 170 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 RILPQ96NA2 401 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms