RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 MRPS24Q96EL2 167 aaKnown RBP5.64□□□□□ -1.51
BRCA1-215ENST00000478531 CYYR1Q96J86 154 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 NICN1Q9BSH3 213 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 BARHL1Q9BZE3 327 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 IFT22Q9H7X7 185 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 SPACA1Q9HBV2 294 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 ESM1Q9NQ30 184 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 RABL2AQ9UBK7 228 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-215ENST00000478531 GHRLQ9UBU3 117 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 STEAP1Q9UHE8 339 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 UBE2J1Q9Y385 318 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-215ENST00000478531 FAM96BQ9Y3D0 163 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 PEX16Q9Y5Y5 336 aa5.64□□□□□ -1.51
BRCA1-215ENST00000478531 A0A0B4J203 849 aa5.63□□□□□ -1.51
BRCA1-215ENST00000478531 UBE2QL1A1L167 161 aa5.63□□□□□ -1.51
BRCA1-215ENST00000478531 RNF212BA8MTL3 300 aa5.63□□□□□ -1.51
BRCA1-215ENST00000478531 C17orf98A8MV24 154 aa5.63□□□□□ -1.51
BRCA1-215ENST00000478531 MCRIP1C9JLW8 97 aa5.63□□□□□ -1.51
BRCA1-215ENST00000478531 PAHP00439 452 aa5.63□□□□□ -1.51
BRCA1-215ENST00000478531 GALP22466 123 aa5.63□□□□□ -1.51
BRCA1-215ENST00000478531 CDK2P24941 298 aa5.63□□□□□ -1.51
BRCA1-215ENST00000478531 KCNJ3P48549 501 aa5.63□□□□□ -1.51
BRCA1-215ENST00000478531 PSMD7P51665 324 aa5.63□□□□□ -1.51
BRCA1-215ENST00000478531 UBE2E1P51965 193 aa5.63□□□□□ -1.51
BRCA1-215ENST00000478531 RPS27AP62979 156 aaKnown RBP5.63□□□□□ -1.51
BRCA1-215ENST00000478531 DYNC1I2Q13409 638 aaKnown RBP5.63□□□□□ -1.51
BRCA1-215ENST00000478531 LTC4SQ16873 150 aa5.63□□□□□ -1.51
BRCA1-215ENST00000478531 HCP5Q6MZN7 132 aa5.63□□□□□ -1.51
BRCA1-215ENST00000478531 BAIAP2L2Q6UXY1 529 aa5.63□□□□□ -1.51
BRCA1-215ENST00000478531 USP43Q70EL4 1123 aa5.63□□□□□ -1.51
BRCA1-215ENST00000478531 C11orf42Q8N5U0 333 aa5.63□□□□□ -1.51
BRCA1-215ENST00000478531 UBALD1Q8TB05 177 aa5.63□□□□□ -1.51
BRCA1-215ENST00000478531 CCDC107Q8WV48 283 aa5.63□□□□□ -1.51
BRCA1-215ENST00000478531 SLC25A28Q96A46 364 aa5.63□□□□□ -1.51
BRCA1-215ENST00000478531 FAM3DQ96BQ1 224 aa5.63□□□□□ -1.51
BRCA1-215ENST00000478531 KCTD7Q96MP8 289 aa5.63□□□□□ -1.51
BRCA1-215ENST00000478531 JMJD8Q96S16 334 aa5.63□□□□□ -1.51
BRCA1-215ENST00000478531 HEXA-AS1Q9H8Q6 139 aa5.63□□□□□ -1.51
BRCA1-215ENST00000478531 UNKLQ9H9P5 680 aaKnown RBP5.63□□□□□ -1.51
BRCA1-215ENST00000478531 ETAA1Q9NY74 926 aa5.63□□□□□ -1.51
BRCA1-215ENST00000478531 OR6C3Q9NZP0 311 aa5.63□□□□□ -1.51
BRCA1-215ENST00000478531 SESN1Q9Y6P5 492 aa5.63□□□□□ -1.51
BRCA1-215ENST00000478531 TMEM272A0A1B0GTI8 110 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 TMEM30CPA0ZSE6 113 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 FAM90A10PA6NDY2 464 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 FAM90A18PA6NE21 464 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 FAM90A16PA6NEW6 464 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 FAM90A20PA6NIJ5 464 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 FAM90A8PA6NJQ4 464 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 FAM90A7PA6NKC0 464 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 IFITM5A6NNB3 132 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 FAM90A22PA8MWA6 464 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 TMEM14DPA8MWL7 114 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 FAM90A12PA8MX19 464 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 FAM90A5PA8MXJ8 464 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 FAM90A23PA8MXZ1 464 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 AIPO00170 330 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 HOXA3O43365 443 aaPredicted RBP5.62□□□□□ -1.51
BRCA1-215ENST00000478531 PDCD6O75340 191 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 MMP23AO75900 390 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 RBP4P02753 201 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 ARG1P05089 322 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 FAM90A15PP0C7V4 464 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 FAM90A13PP0C7W8 464 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 FAM90A14PP0C7W9 464 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 FAM90A24PP0C7X0 464 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 SMIM18P0DKX4 95 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 SLC2A2P11168 524 aaPredicted RBP5.62□□□□□ -1.51
BRCA1-215ENST00000478531 FUT3P21217 361 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 NFYBP25208 207 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 PAX6P26367 422 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 FGF9P31371 208 aaPredicted RBP5.62□□□□□ -1.51
BRCA1-215ENST00000478531 SDC2P34741 201 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 SSTR5P35346 364 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 TGFBR1P36897 503 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 LGALS4P56470 323 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 LSM3P62310 102 aaKnown RBP5.62□□□□□ -1.51
BRCA1-215ENST00000478531 QRFPP83859 136 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 PLA2G7Q13093 441 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 RBM39Q14498 530 aaKnown RBP5.62□□□□□ -1.51
BRCA1-215ENST00000478531 KRTAP24-1Q3LI83 254 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 SIGIRRQ6IA17 410 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 CCBE1Q6UXH8 406 aaPredicted RBP5.62□□□□□ -1.51
BRCA1-215ENST00000478531 RTN4RL2Q86UN3 420 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 NR2C2APQ86WQ0 139 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 OR13D1Q8NGV5 346 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 C17orf50Q8WW18 174 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 NEDD4LQ96PU5 975 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 LIN7BQ9HAP6 207 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 CALYQ9NYX4 217 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 RCC2Q9P258 522 aaKnown RBP5.62□□□□□ -1.51
BRCA1-215ENST00000478531 A0A0A6YYD4 124 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 A0A0A6YYJ9 748 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 IGHV2-26A0A0B4J1V2 119 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 ZNF729A6NN14 1252 aaPredicted RBP5.62□□□□□ -1.51
BRCA1-215ENST00000478531 AIREO43918 545 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 IGHV3-7P01780 117 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 FBP1P09467 338 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 CLEC2LP0C7M8 214 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 BLVRBP30043 206 aaPredicted RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms